Strain Fitness in Escherichia fergusonii Becca around EFB2_03657

Experiment: BHIS no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community
3,823,117	-		EFB2_03656	0.55	+1.8
3,823,117	-		EFB2_03656	0.55	-0.3
3,823,169	+		EFB2_03656	0.59	+0.7
3,823,170	-		EFB2_03656	0.59	+0.3
3,823,191	+		EFB2_03656	0.61	+1.1
3,823,192	-		EFB2_03656	0.61	+0.3
3,823,209	+		EFB2_03656	0.62	-0.8
3,823,209	+		EFB2_03656	0.62	+0.3
3,823,209	+		EFB2_03656	0.62	+1.0
3,823,209	+		EFB2_03656	0.62	+1.4
3,823,210	-		EFB2_03656	0.62	-0.5
3,823,210	-		EFB2_03656	0.62	+0.6
3,823,210	-		EFB2_03656	0.62	-1.3
3,823,210	-		EFB2_03656	0.62	+1.2
3,823,210	-		EFB2_03656	0.62	+0.4
3,823,210	-		EFB2_03656	0.62	+0.3
3,823,210	-		EFB2_03656	0.62	-1.5
3,823,312	-		EFB2_03656	0.70	-0.5
3,823,312	-		EFB2_03656	0.70	-1.9
3,823,325	+		EFB2_03656	0.71	-1.4
3,823,325	+		EFB2_03656	0.71	-1.5
3,823,325	+		EFB2_03656	0.71	-2.2
3,823,325	+		EFB2_03656	0.71	-0.6
3,823,326	-		EFB2_03656	0.71	-2.7
3,823,326	-		EFB2_03656	0.71	+2.3
3,823,326	-		EFB2_03656	0.71	+1.5
3,823,326	-		EFB2_03656	0.71	+2.2
3,823,326	-		EFB2_03656	0.71	+0.0
3,823,326	-		EFB2_03656	0.71	+0.3
3,823,326	-		EFB2_03656	0.71	-2.2
3,823,337	+		EFB2_03656	0.72	+0.0
3,823,337	+		EFB2_03656	0.72	-3.6
3,823,337	+		EFB2_03656	0.72	+4.4
3,823,337	+		EFB2_03656	0.72	-0.5
3,823,338	-		EFB2_03656	0.72	-3.2
3,823,338	-		EFB2_03656	0.72	-0.2
3,823,341	+		EFB2_03656	0.72	-0.3
3,823,341	+		EFB2_03656	0.72	+0.8
3,823,342	-		EFB2_03656	0.72	-0.1
3,823,401	+		EFB2_03656	0.77	-0.4
3,823,401	+		EFB2_03656	0.77	-1.2
3,823,401	+		EFB2_03656	0.77	-2.5
3,823,401	+		EFB2_03656	0.77	+2.0
3,823,402	-		EFB2_03656	0.77	-2.0
3,823,402	-		EFB2_03656	0.77	+0.6
3,823,402	-		EFB2_03656	0.77	+0.8
3,823,402	-		EFB2_03656	0.77	-2.4
3,823,408	-		EFB2_03656	0.77	+0.5
3,823,442	+		EFB2_03656	0.80	-0.5
3,823,442	+		EFB2_03656	0.80	-2.4
3,823,442	+		EFB2_03656	0.80	-0.8
3,823,462	+		EFB2_03656	0.81	+0.2
3,823,463	-		EFB2_03656	0.81	-1.6
3,823,463	-		EFB2_03656	0.81	-0.0
3,823,476	+		EFB2_03656	0.82	+0.9
3,823,537	+		EFB2_03656	0.87	-1.0
3,823,538	-		EFB2_03656	0.87	-1.5
3,823,561	-		EFB2_03656	0.89	+0.7
3,823,561	-		EFB2_03656	0.89	-0.3
3,823,561	-		EFB2_03656	0.89	-1.0
3,823,629	+				+0.6
3,823,629	+				-2.0
3,823,629	+				+0.2
3,823,629	+				+0.8
3,823,630	-				+1.4
3,823,630	-				+0.1
3,823,630	-				-1.9
3,823,630	-				+0.3
3,823,630	-				-0.4
3,823,630	-				-0.2
3,823,630	-				+1.0
3,823,630	-				-1.4
3,823,630	-				+1.2
3,823,630	-				-0.2
3,823,630	-				+0.4
3,823,635	+				-2.4
3,823,636	-				-0.3
3,823,665	+				-0.2
3,823,696	+				+0.6
3,823,696	+				-0.8
3,823,696	+				-3.0
3,823,696	+				+1.5
3,823,696	+				+0.3
3,823,696	+				+0.3
3,823,697	-				+0.2
3,823,697	-				+0.6
3,823,697	-				-0.7
3,823,697	-				-1.5
3,823,697	-				+0.1
3,823,697	-				+0.1
3,823,697	-				+0.1
3,823,710	+				+1.2
3,823,710	+				+0.3
3,823,710	+				+1.1
3,823,710	+				+1.7
3,823,711	-				-0.2
3,823,711	-				-1.2
3,823,711	-				-2.8
3,823,711	-				-2.3
3,823,711	-				-0.7
3,823,711	-				-0.9
3,823,711	-				-0.0
3,823,711	-				-0.3
3,823,717	+				+0.8
3,823,717	+				+1.6
3,823,717	+				-1.9
3,823,718	-				+0.3
3,823,718	-				-0.2
3,823,718	-				+0.1
3,823,718	-				-1.1
3,823,718	-				-2.4
3,823,740	+				+0.1
3,823,740	+				+0.2
3,823,740	+				-0.0
3,823,740	+				+1.0
3,823,740	+				+1.0
3,823,740	+				-1.5
3,823,740	+				-0.8
3,823,740	+				-0.8
3,823,740	+				-3.0
3,823,741	-				-2.3
3,823,741	-				-1.4
3,823,741	-				+0.8
3,823,741	-				+0.3
3,823,741	-				+0.4
3,823,775	+				-0.9
3,823,775	+				+1.5
3,823,775	+				-3.1
3,823,775	+				-0.3
3,823,775	+				-0.8
3,823,775	+				-1.8
3,823,776	-				+0.4
3,823,776	-				+0.0
3,823,776	-				+0.9
3,823,776	-				+1.5
3,823,776	-				-0.3
3,823,776	-				-0.1
3,823,776	-				-0.3
3,823,776	-				+0.4
3,823,776	-				+0.1
3,823,776	-				-3.9
3,823,783	+				+0.1
3,823,783	+				+0.3
3,823,783	+				-0.2
3,823,783	+				+0.1
3,823,784	-				+1.2
3,823,784	-				+0.8
3,823,784	-				-0.0
3,823,784	-				-1.9
3,823,784	-				-1.4
3,823,784	-				-3.1
3,823,784	-				-4.0
3,823,785	+				-1.3
3,823,785	+				+1.4
3,823,785	+				-0.9
3,823,785	+				+0.1
3,823,785	+				+1.8
3,823,785	+				+1.3
3,823,785	+				+2.0
3,823,785	+				+0.7
3,823,785	+				+2.1
3,823,785	+				+0.5
3,823,786	-				+1.4
3,823,786	-				+0.6
3,823,786	-				+0.5
3,823,786	-				-0.5
3,823,786	-				+1.3
3,823,786	-				-2.5
3,823,790	-				+0.8
3,823,809	+				+0.4
3,823,809	+				+0.3
3,823,810	-				-2.1
3,823,810	-				-0.6
3,823,835	+				-1.2
3,823,835	+				-2.1
3,823,835	+				+1.4
3,823,848	+				+0.5
3,823,855	+				-1.2
3,823,855	+				-2.2
3,823,855	+				+1.2
3,823,856	-				+1.1
3,823,856	-				+1.2
3,823,868	+				-3.0
3,823,900	+				-0.7
3,823,901	-				-0.9
3,823,901	-				+1.4
3,823,940	+				+0.9
3,823,940	+				+0.3
3,823,940	+				+1.2
3,823,941	-				+0.9
3,823,941	-				+2.0
3,823,941	-				+2.8
3,823,941	-				-1.2
3,823,943	-				-0.1
3,823,944	+				-1.4
3,823,945	-				-3.1
3,823,971	-				-0.6
3,824,002	-				-2.9
3,824,033	+				+0.1
3,824,033	+				+0.2
3,824,049	+				-0.5
3,824,049	+				-0.3
3,824,049	+				-0.1
3,824,050	-				-1.2
3,824,069	+				-1.2
3,824,089	+				+0.5
3,824,090	-				-1.2
3,824,090	-				-1.0
3,824,097	+				+0.3
3,824,097	+				-1.1
3,824,098	-				+2.1
3,824,138	+				+2.0
3,824,138	+				-1.0
3,824,139	-				+0.7
3,824,139	-				+0.7
3,824,139	-				-0.0
3,824,139	-				+3.1
3,824,139	-				-1.0
3,824,170	+				+1.0
3,824,170	+				-0.2
3,824,181	-				-0.5
3,824,185	+				-1.9
3,824,185	+				+0.1
3,824,185	+				+0.5
3,824,185	+				+0.3
3,824,185	+				-1.1
3,824,185	+				+1.6
3,824,185	+				-1.6
3,824,185	+				-1.0
3,824,185	+				+0.1
3,824,185	+				+0.6
3,824,185	+				-1.7
3,824,185	+				+0.0
3,824,185	+				+2.0
3,824,186	-				+0.7
3,824,186	-				-2.0
3,824,186	-				+0.9
3,824,186	-				-1.5
3,824,186	-				+2.6
3,824,186	-				-1.2
3,824,186	-				+0.7
3,824,186	-				+1.5
3,824,186	-				-0.6
3,824,186	-				+0.3
3,824,186	-				-0.6
3,824,194	+				+0.4
3,824,194	+				+2.5
3,824,194	+				+1.5
3,824,195	-				-0.9
3,824,281	+		EFB2_03657	0.13	-0.9
3,824,281	+		EFB2_03657	0.13	-1.3
3,824,281	+		EFB2_03657	0.13	-0.4
3,824,282	-		EFB2_03657	0.13	-0.0
3,824,282	-		EFB2_03657	0.13	+1.0
3,824,292	+		EFB2_03657	0.14	-1.4
3,824,292	+		EFB2_03657	0.14	-2.5
3,824,317	+		EFB2_03657	0.15	-0.1
3,824,317	+		EFB2_03657	0.15	-2.7
3,824,317	+		EFB2_03657	0.15	-0.4
3,824,317	+		EFB2_03657	0.15	-1.3
3,824,318	-		EFB2_03657	0.16	+1.7
3,824,318	-		EFB2_03657	0.16	+1.4
3,824,356	+		EFB2_03657	0.18	-0.2
3,824,357	-		EFB2_03657	0.19	+2.1
3,824,357	-		EFB2_03657	0.19	-1.6
3,824,390	+		EFB2_03657	0.21	-0.5
3,824,390	+		EFB2_03657	0.21	-1.3
3,824,391	-		EFB2_03657	0.21	+0.4
3,824,398	+		EFB2_03657	0.22	+1.0
3,824,398	+		EFB2_03657	0.22	+1.8
3,824,399	-		EFB2_03657	0.22	+1.0
3,824,399	-		EFB2_03657	0.22	+0.5
3,824,417	-		EFB2_03657	0.23	-0.5
3,824,433	+		EFB2_03657	0.24	+0.7
3,824,433	+		EFB2_03657	0.24	+0.2
3,824,433	+		EFB2_03657	0.24	-0.4
3,824,433	+		EFB2_03657	0.24	+2.2
3,824,434	-		EFB2_03657	0.24	+1.4
3,824,434	-		EFB2_03657	0.24	-0.1
3,824,434	-		EFB2_03657	0.24	+1.2
3,824,498	+		EFB2_03657	0.29	-0.2
3,824,498	+		EFB2_03657	0.29	-1.5
3,824,499	-		EFB2_03657	0.29	-2.1
3,824,499	-		EFB2_03657	0.29	+0.0
3,824,509	+		EFB2_03657	0.30	+0.2
3,824,509	+		EFB2_03657	0.30	-0.9
3,824,509	+		EFB2_03657	0.30	-2.0
3,824,510	-		EFB2_03657	0.30	-1.0
3,824,510	-		EFB2_03657	0.30	-2.2
3,824,510	-		EFB2_03657	0.30	+0.2
3,824,510	-		EFB2_03657	0.30	+1.1
3,824,510	-		EFB2_03657	0.30	+0.7
3,824,510	-		EFB2_03657	0.30	-2.9
3,824,616	-		EFB2_03657	0.39	+0.3
3,824,616	-		EFB2_03657	0.39	-2.7
3,824,740	-		EFB2_03657	0.48	-1.3
3,824,747	+		EFB2_03657	0.49	+2.1
3,824,747	+		EFB2_03657	0.49	+0.2
3,824,747	+		EFB2_03657	0.49	-0.5
3,824,764	+		EFB2_03657	0.50	-0.0
3,824,764	+		EFB2_03657	0.50	-0.4
3,824,765	-		EFB2_03657	0.50	-1.0
3,824,768	+		EFB2_03657	0.50	-2.0
3,824,768	+		EFB2_03657	0.50	-2.2
3,824,768	+		EFB2_03657	0.50	+0.2
3,824,768	+		EFB2_03657	0.50	-0.5
3,824,768	+		EFB2_03657	0.50	+0.1
3,824,768	+		EFB2_03657	0.50	+1.0
3,824,768	+		EFB2_03657	0.50	+0.7
3,824,768	+		EFB2_03657	0.50	+2.0
3,824,768	+		EFB2_03657	0.50	-1.5
3,824,768	+		EFB2_03657	0.50	+1.0
3,824,768	+		EFB2_03657	0.50	+1.8
3,824,768	+		EFB2_03657	0.50	-0.9
3,824,768	+		EFB2_03657	0.50	-1.4
3,824,768	+		EFB2_03657	0.50	+0.1
3,824,769	-		EFB2_03657	0.50	-0.4
3,824,769	-		EFB2_03657	0.50	-1.3
3,824,769	-		EFB2_03657	0.50	+1.2
3,824,769	-		EFB2_03657	0.50	-2.3
3,824,769	-		EFB2_03657	0.50	+0.0
3,824,769	-		EFB2_03657	0.50	+0.5
3,824,769	-		EFB2_03657	0.50	+0.2
3,824,769	-		EFB2_03657	0.50	-0.9
3,824,769	-		EFB2_03657	0.50	-1.9
3,824,769	-		EFB2_03657	0.50	-0.0
3,824,769	-		EFB2_03657	0.50	+1.8
3,824,769	-		EFB2_03657	0.50	-0.6
3,824,769	-		EFB2_03657	0.50	-0.8
3,824,769	-		EFB2_03657	0.50	-0.2
3,824,866	+		EFB2_03657	0.58	-3.0
3,824,867	-		EFB2_03657	0.58	-1.4
3,824,867	-		EFB2_03657	0.58	-1.0
3,824,867	-		EFB2_03657	0.58	-2.1
3,824,867	-		EFB2_03657	0.58	-1.5
3,824,867	-		EFB2_03657	0.58	-0.5
3,824,867	-		EFB2_03657	0.58	-0.9
3,824,868	+		EFB2_03657	0.58	+1.0
3,824,868	+		EFB2_03657	0.58	+0.6
3,824,868	+		EFB2_03657	0.58	-0.7
3,824,868	+		EFB2_03657	0.58	-0.3
3,824,868	+		EFB2_03657	0.58	+1.6
3,824,868	+		EFB2_03657	0.58	+0.3
3,824,868	+		EFB2_03657	0.58	+0.5
3,824,868	+		EFB2_03657	0.58	-2.0
3,824,868	+		EFB2_03657	0.58	-2.7
3,824,868	+		EFB2_03657	0.58	-1.0
3,824,868	+		EFB2_03657	0.58	-3.3
3,824,869	-		EFB2_03657	0.58	-2.4
3,824,869	-		EFB2_03657	0.58	-1.5
3,824,869	-		EFB2_03657	0.58	+0.2
3,824,869	-		EFB2_03657	0.58	-3.4
3,824,869	-		EFB2_03657	0.58	+0.9
3,824,869	-		EFB2_03657	0.58	+2.0
3,824,869	-		EFB2_03657	0.58	+2.3
3,824,869	-		EFB2_03657	0.58	-2.1
3,824,869	-		EFB2_03657	0.58	-2.5
3,824,950	-		EFB2_03657	0.64	-0.3
3,824,950	-		EFB2_03657	0.64	+0.6
3,824,956	+		EFB2_03657	0.65	-0.8
3,824,980	+		EFB2_03657	0.67	-2.6
3,824,980	+		EFB2_03657	0.67	+0.8
3,824,981	-		EFB2_03657	0.67	-1.5
3,824,998	+		EFB2_03657	0.68	-0.8
3,824,998	+		EFB2_03657	0.68	+2.5
3,825,056	-		EFB2_03657	0.72	+0.6
3,825,109	+		EFB2_03657	0.77	-0.6
3,825,121	+		EFB2_03657	0.77	-1.1
3,825,121	+		EFB2_03657	0.77	-0.5
3,825,155	-		EFB2_03657	0.80	+0.5
3,825,155	-		EFB2_03657	0.80	+0.6
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