Strain Fitness in Escherichia fergusonii Becca around EFB2_02432

Experiment: BHIS no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community
2,571,184	+		EFB2_02430	0.13	+0.9
2,571,185	-		EFB2_02430	0.13	-1.1
2,571,185	-		EFB2_02430	0.13	+0.1
2,571,185	-		EFB2_02430	0.13	+2.3
2,571,185	-		EFB2_02430	0.13	-2.5
2,571,185	-		EFB2_02430	0.13	+0.6
2,571,185	-		EFB2_02430	0.13	+0.4
2,571,185	-		EFB2_02430	0.13	-0.1
2,571,199	-		EFB2_02430	0.17	-1.5
2,571,199	-		EFB2_02430	0.17	-2.0
2,571,202	+		EFB2_02430	0.18	+2.3
2,571,202	+		EFB2_02430	0.18	-1.5
2,571,203	-		EFB2_02430	0.18	-2.5
2,571,203	-		EFB2_02430	0.18	-2.2
2,571,203	-		EFB2_02430	0.18	-1.0
2,571,223	-		EFB2_02430	0.23	+1.1
2,571,267	+		EFB2_02430	0.35	-0.1
2,571,282	+		EFB2_02430	0.39	+0.5
2,571,282	+		EFB2_02430	0.39	-2.1
2,571,282	+		EFB2_02430	0.39	-1.6
2,571,282	+		EFB2_02430	0.39	-2.8
2,571,282	+		EFB2_02430	0.39	+0.1
2,571,283	-		EFB2_02430	0.39	-0.5
2,571,283	-		EFB2_02430	0.39	+0.5
2,571,283	-		EFB2_02430	0.39	+1.7
2,571,298	+		EFB2_02430	0.43	-0.6
2,571,299	-		EFB2_02430	0.43	-1.3
2,571,299	-		EFB2_02430	0.43	+0.5
2,571,299	-		EFB2_02430	0.43	-0.6
2,571,334	+		EFB2_02430	0.52	-1.0
2,571,348	+		EFB2_02430	0.56	+0.7
2,571,348	+		EFB2_02430	0.56	-1.3
2,571,348	+		EFB2_02430	0.56	-2.8
2,571,348	+		EFB2_02430	0.56	-2.6
2,571,348	+		EFB2_02430	0.56	+1.3
2,571,349	-		EFB2_02430	0.56	-2.1
2,571,349	-		EFB2_02430	0.56	-0.5
2,571,349	-		EFB2_02430	0.56	-0.6
2,571,349	-		EFB2_02430	0.56	-1.5
2,571,349	-		EFB2_02430	0.56	-0.0
2,571,349	-		EFB2_02430	0.56	-0.2
2,571,349	-		EFB2_02430	0.56	+1.4
2,571,356	+		EFB2_02430	0.58	+0.8
2,571,356	+		EFB2_02430	0.58	-0.3
2,571,356	+		EFB2_02430	0.58	-0.7
2,571,357	-		EFB2_02430	0.58	-1.0
2,571,357	-		EFB2_02430	0.58	+1.1
2,571,357	-		EFB2_02430	0.58	+0.7
2,571,357	-		EFB2_02430	0.58	+0.9
2,571,357	-		EFB2_02430	0.58	+1.2
2,571,357	-		EFB2_02430	0.58	-1.1
2,571,357	-		EFB2_02430	0.58	+0.5
2,571,380	-		EFB2_02430	0.64	+1.3
2,571,380	-		EFB2_02430	0.64	-0.2
2,571,481	+				-0.1
2,571,481	+				-0.5
2,571,482	-				-1.4
2,571,482	-				-1.5
2,571,490	+				+0.4
2,571,491	-				-1.2
2,571,491	-				+2.1
2,571,493	+				-0.1
2,571,494	-				-1.6
2,571,494	-				-0.9
2,571,494	-				+0.9
2,571,494	-				-1.1
2,571,523	+				+0.4
2,571,523	+				+3.1
2,571,524	-				-0.9
2,571,524	-				+1.1
2,571,524	-				-0.1
2,571,524	-				+0.6
2,571,524	-				-1.7
2,571,524	-				+0.5
2,571,556	-				-2.3
2,571,632	-		EFB2_02431	0.22	+2.1
2,571,632	-		EFB2_02431	0.22	-1.7
2,571,632	-		EFB2_02431	0.22	+0.5
2,571,632	-		EFB2_02431	0.22	-0.4
2,571,653	-		EFB2_02431	0.26	-2.1
2,571,653	-		EFB2_02431	0.26	-0.1
2,571,653	-		EFB2_02431	0.26	-2.2
2,571,653	-		EFB2_02431	0.26	+0.0
2,571,653	-		EFB2_02431	0.26	-3.8
2,571,653	-		EFB2_02431	0.26	-2.2
2,571,653	-		EFB2_02431	0.26	-0.6
2,571,653	-		EFB2_02431	0.26	+0.5
2,571,673	-		EFB2_02431	0.31	-1.0
2,571,697	-		EFB2_02431	0.37	+0.5
2,571,697	-		EFB2_02431	0.37	+0.8
2,571,697	-		EFB2_02431	0.37	+1.2
2,571,697	-		EFB2_02431	0.37	-2.0
2,571,733	-		EFB2_02431	0.45	+0.9
2,571,733	-		EFB2_02431	0.45	-1.0
2,571,733	-		EFB2_02431	0.45	+3.0
2,571,754	-		EFB2_02431	0.50	+1.4
2,571,754	-		EFB2_02431	0.50	+1.6
2,571,754	-		EFB2_02431	0.50	+0.7
2,571,808	-		EFB2_02431	0.62	-2.3
2,571,811	-		EFB2_02431	0.63	-1.8
2,571,811	-		EFB2_02431	0.63	+0.7
2,571,811	-		EFB2_02431	0.63	+1.1
2,571,811	-		EFB2_02431	0.63	+1.6
2,571,829	-		EFB2_02431	0.67	+0.8
2,571,829	-		EFB2_02431	0.67	+1.1
2,571,844	-		EFB2_02431	0.70	+2.4
2,571,844	-		EFB2_02431	0.70	+1.0
2,571,844	-		EFB2_02431	0.70	-0.1
2,571,844	-		EFB2_02431	0.70	-0.9
2,571,862	-		EFB2_02431	0.74	-0.5
2,571,879	-		EFB2_02431	0.78	+1.7
2,571,879	-		EFB2_02431	0.78	-0.1
2,571,910	-		EFB2_02431	0.86	-2.1
2,571,923	-		EFB2_02431	0.89	+0.4
2,571,964	-				+0.6
2,572,028	+				+1.1
2,572,103	+				+0.4
2,572,107	+				+4.7
2,572,108	-				-0.5
2,572,108	-				+2.1
2,572,122	+				-1.0
2,572,122	+				-2.5
2,572,122	+				-2.5
2,572,132	+				+1.8
2,572,133	-				-1.7
2,572,139	+				+5.0
2,572,139	+				+0.5
2,572,140	-				+0.4
2,572,141	+				+1.2
2,572,141	+				-1.2
2,572,141	+				-2.2
2,572,141	+				-2.5
2,572,142	-				-1.5
2,572,142	-				+0.4
2,572,155	-				+1.7
2,572,163	+				+0.5
2,572,163	+				+1.8
2,572,163	+				+1.1
2,572,163	+				-3.9
2,572,163	+				+0.2
2,572,163	+				-0.7
2,572,164	-				-0.7
2,572,164	-				-2.0
2,572,164	-				+0.8
2,572,164	-				+1.2
2,572,164	-				+0.7
2,572,188	+				-0.8
2,572,188	+				-2.0
2,572,188	+				-1.5
2,572,188	+				-0.8
2,572,189	-				+2.2
2,572,189	-				+1.1
2,572,198	+				+1.6
2,572,199	-				+1.8
2,572,206	+				+1.5
2,572,206	+				+1.2
2,572,206	+				+0.3
2,572,206	+				-2.4
2,572,206	+				+1.0
2,572,206	+				-1.4
2,572,207	-				-1.6
2,572,303	+		EFB2_02432	0.18	-1.0
2,572,303	+		EFB2_02432	0.18	-0.7
2,572,304	-		EFB2_02432	0.18	+0.7
2,572,304	-		EFB2_02432	0.18	-1.2
2,572,304	-		EFB2_02432	0.18	-2.6
2,572,331	+		EFB2_02432	0.22	+0.7
2,572,331	+		EFB2_02432	0.22	-2.3
2,572,331	+		EFB2_02432	0.22	+2.1
2,572,332	-		EFB2_02432	0.22	-1.5
2,572,332	-		EFB2_02432	0.22	-0.6
2,572,332	-		EFB2_02432	0.22	-1.3
2,572,335	+		EFB2_02432	0.23	-2.0
2,572,335	+		EFB2_02432	0.23	-1.5
2,572,335	+		EFB2_02432	0.23	+1.8
2,572,335	+		EFB2_02432	0.23	-0.6
2,572,335	+		EFB2_02432	0.23	-2.4
2,572,336	-		EFB2_02432	0.23	-1.5
2,572,336	-		EFB2_02432	0.23	+0.7
2,572,336	-		EFB2_02432	0.23	+1.9
2,572,336	-		EFB2_02432	0.23	-1.7
2,572,336	-		EFB2_02432	0.23	+0.4
2,572,358	+		EFB2_02432	0.26	+1.0
2,572,358	+		EFB2_02432	0.26	-2.1
2,572,358	+		EFB2_02432	0.26	-1.2
2,572,358	+		EFB2_02432	0.26	-2.1
2,572,358	+		EFB2_02432	0.26	-1.1
2,572,359	-		EFB2_02432	0.26	+0.8
2,572,361	+		EFB2_02432	0.27	-0.3
2,572,361	+		EFB2_02432	0.27	-0.7
2,572,362	-		EFB2_02432	0.27	-1.5
2,572,384	+		EFB2_02432	0.30	+1.8
2,572,384	+		EFB2_02432	0.30	-1.7
2,572,384	+		EFB2_02432	0.30	-1.9
2,572,384	+		EFB2_02432	0.30	-0.0
2,572,384	+		EFB2_02432	0.30	-0.1
2,572,384	+		EFB2_02432	0.30	-0.5
2,572,384	+		EFB2_02432	0.30	-2.0
2,572,384	+		EFB2_02432	0.30	-1.3
2,572,384	+		EFB2_02432	0.30	+1.1
2,572,385	-		EFB2_02432	0.30	-0.9
2,572,385	-		EFB2_02432	0.30	-1.5
2,572,385	-		EFB2_02432	0.30	-2.3
2,572,385	-		EFB2_02432	0.30	-1.1
2,572,385	-		EFB2_02432	0.30	+0.6
2,572,385	-		EFB2_02432	0.30	+1.9
2,572,538	-		EFB2_02432	0.53	+0.1
2,572,548	+		EFB2_02432	0.55	-0.3
2,572,548	+		EFB2_02432	0.55	-2.5
2,572,548	+		EFB2_02432	0.55	+1.2
2,572,567	+		EFB2_02432	0.58	+0.8
2,572,567	+		EFB2_02432	0.58	+2.7
2,572,597	+		EFB2_02432	0.62	+0.7
2,572,598	-		EFB2_02432	0.62	+0.7
2,572,600	+		EFB2_02432	0.62	-1.9
2,572,707	+		EFB2_02432	0.79	+1.1
2,572,726	+		EFB2_02432	0.81	+0.6
2,572,726	+		EFB2_02432	0.81	-2.0
2,572,727	-		EFB2_02432	0.82	-1.2
2,572,727	-		EFB2_02432	0.82	+0.5
2,572,727	-		EFB2_02432	0.82	+1.7
2,572,788	+				+0.3
2,572,788	+				-0.6
2,572,788	+				+1.0
2,572,788	+				+0.1
2,572,788	+				-1.4
2,572,789	-				-0.5
2,572,789	-				-1.4
2,572,789	-				-1.8
2,572,792	+				-2.6
2,572,792	+				+0.6
2,572,792	+				-0.7
2,572,792	+				+0.4
2,572,792	+				+0.3
2,572,792	+				+0.1
2,572,792	+				+0.1
2,572,792	+				+0.8
2,572,792	+				+1.0
2,572,792	+				+2.0
2,572,792	+				-1.6
2,572,792	+				+0.7
2,572,792	+				+1.0
2,572,792	+				-0.5
2,572,792	+				+1.9
2,572,792	+				-2.3
2,572,792	+				+1.1
2,572,792	+				+1.4
2,572,793	-				-0.5
2,572,793	-				-1.1
2,572,793	-				-1.7
2,572,808	-				+1.8
2,572,810	+				-0.3
2,572,810	+				-0.7
2,572,813	+				+0.9
2,572,842	-				+1.7
2,572,842	-				-1.5
2,572,847	+				+0.5
2,572,847	+				-2.9
2,572,848	-				+1.2
2,572,875	+				+0.9
2,572,876	-				+0.9
2,572,876	-				+0.6
2,572,932	-				+1.7
2,572,932	-				-0.6
2,572,935	-				-0.3
2,572,935	-				+1.7
2,572,935	-				+0.3
2,572,965	+				+0.1
2,572,966	-				-2.0
2,572,966	-				+0.4
2,572,966	-				+1.0
2,573,006	-		EFB2_02433	0.11	+0.2
2,573,009	+		EFB2_02433	0.11	-0.5
2,573,010	-		EFB2_02433	0.11	+1.7
2,573,010	-		EFB2_02433	0.11	+1.3
2,573,010	-		EFB2_02433	0.11	-3.4
2,573,010	-		EFB2_02433	0.11	+1.7
2,573,010	-		EFB2_02433	0.11	+2.0
2,573,010	-		EFB2_02433	0.11	+0.1
2,573,036	-		EFB2_02433	0.14	+0.4
2,573,036	-		EFB2_02433	0.14	+1.3
2,573,038	+		EFB2_02433	0.14	+0.4
2,573,038	+		EFB2_02433	0.14	+0.1
2,573,039	-		EFB2_02433	0.14	+0.4
2,573,039	-		EFB2_02433	0.14	+1.6
2,573,039	-		EFB2_02433	0.14	+1.2
2,573,039	-		EFB2_02433	0.14	+0.7
2,573,039	-		EFB2_02433	0.14	-1.5
2,573,039	-		EFB2_02433	0.14	-2.5
2,573,039	-		EFB2_02433	0.14	+0.8
2,573,039	-		EFB2_02433	0.14	-0.4
2,573,043	-		EFB2_02433	0.14	+0.5
2,573,055	-		EFB2_02433	0.15	-1.2
2,573,101	+		EFB2_02433	0.19	+0.9
2,573,110	+		EFB2_02433	0.20	+2.6
2,573,110	+		EFB2_02433	0.20	+0.5
2,573,110	+		EFB2_02433	0.20	+0.3
2,573,111	-		EFB2_02433	0.20	-1.9
2,573,111	-		EFB2_02433	0.20	+1.6
2,573,111	-		EFB2_02433	0.20	-0.9
2,573,111	-		EFB2_02433	0.20	+2.3
2,573,111	-		EFB2_02433	0.20	-1.6
2,573,150	-		EFB2_02433	0.23	-1.1
2,573,150	-		EFB2_02433	0.23	-0.1
2,573,168	+		EFB2_02433	0.25	-1.0
2,573,168	+		EFB2_02433	0.25	-0.1
2,573,168	+		EFB2_02433	0.25	-1.0
2,573,168	+		EFB2_02433	0.25	-2.3
2,573,169	-		EFB2_02433	0.25	+1.1
2,573,169	-		EFB2_02433	0.25	+0.9
2,573,169	-		EFB2_02433	0.25	+0.4
2,573,169	-		EFB2_02433	0.25	-1.5
2,573,169	-		EFB2_02433	0.25	+1.1
2,573,169	-		EFB2_02433	0.25	+2.1
2,573,190	-		EFB2_02433	0.27	-0.5
2,573,190	-		EFB2_02433	0.27	+1.0
2,573,190	-		EFB2_02433	0.27	+0.7
2,573,190	-		EFB2_02433	0.27	+4.3
2,573,217	-		EFB2_02433	0.29	+1.1
2,573,217	-		EFB2_02433	0.29	-0.4
2,573,230	+		EFB2_02433	0.30	+0.9
2,573,231	-		EFB2_02433	0.30	+1.8
2,573,231	-		EFB2_02433	0.30	+0.9
2,573,231	-		EFB2_02433	0.30	+3.0
2,573,250	+		EFB2_02433	0.32	+2.8
2,573,250	+		EFB2_02433	0.32	-0.2
2,573,250	+		EFB2_02433	0.32	-2.1
2,573,251	-		EFB2_02433	0.32	-0.7
2,573,251	-		EFB2_02433	0.32	+1.4
2,573,251	-		EFB2_02433	0.32	-1.3
2,573,251	-		EFB2_02433	0.32	+0.1
2,573,251	-		EFB2_02433	0.32	+1.4
2,573,251	-		EFB2_02433	0.32	-1.1
2,573,306	+		EFB2_02433	0.36	-2.6
2,573,306	+		EFB2_02433	0.36	-1.6
2,573,306	+		EFB2_02433	0.36	+0.1
2,573,309	+		EFB2_02433	0.37	+2.3
2,573,309	+		EFB2_02433	0.37	+0.7
2,573,310	-		EFB2_02433	0.37	+0.9
2,573,310	-		EFB2_02433	0.37	+2.0
2,573,310	-		EFB2_02433	0.37	-0.0
2,573,310	-		EFB2_02433	0.37	-0.6
2,573,310	-		EFB2_02433	0.37	+0.5
2,573,315	+		EFB2_02433	0.37	+1.0
2,573,315	+		EFB2_02433	0.37	+0.7
2,573,316	-		EFB2_02433	0.37	-2.6
2,573,371	+		EFB2_02433	0.42	-2.4
2,573,373	+		EFB2_02433	0.42	-0.7
2,573,373	+		EFB2_02433	0.42	-0.7
2,573,373	+		EFB2_02433	0.42	-0.5
2,573,373	+		EFB2_02433	0.42	+1.4
2,573,373	+		EFB2_02433	0.42	+1.1
2,573,373	+		EFB2_02433	0.42	-2.6
2,573,373	+		EFB2_02433	0.42	+1.8
2,573,373	+		EFB2_02433	0.42	-0.1
2,573,373	+		EFB2_02433	0.42	-0.3
2,573,373	+		EFB2_02433	0.42	+1.1
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