Strain Fitness in Escherichia fergusonii Becca around EFB2_01999

Experiment: BHIS no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community
2,157,316	-				-2.2
2,157,335	+		EFB2_01997	0.16	+0.2
2,157,335	+		EFB2_01997	0.16	+0.3
2,157,335	+		EFB2_01997	0.16	-0.1
2,157,336	-		EFB2_01997	0.16	+2.8
2,157,336	-		EFB2_01997	0.16	+0.7
2,157,336	-		EFB2_01997	0.16	-1.0
2,157,336	-		EFB2_01997	0.16	-1.0
2,157,372	+		EFB2_01997	0.30	-1.2
2,157,372	+		EFB2_01997	0.30	-1.7
2,157,373	-		EFB2_01997	0.30	+0.7
2,157,373	-		EFB2_01997	0.30	-0.9
2,157,375	+		EFB2_01997	0.31	-0.7
2,157,375	+		EFB2_01997	0.31	+1.2
2,157,375	+		EFB2_01997	0.31	+2.6
2,157,376	-		EFB2_01997	0.31	-3.5
2,157,376	-		EFB2_01997	0.31	-1.2
2,157,384	+		EFB2_01997	0.34	-1.6
2,157,384	+		EFB2_01997	0.34	+0.6
2,157,384	+		EFB2_01997	0.34	+1.1
2,157,385	-		EFB2_01997	0.34	-1.2
2,157,385	-		EFB2_01997	0.34	-1.8
2,157,388	+		EFB2_01997	0.36	+0.1
2,157,389	-		EFB2_01997	0.36	-0.7
2,157,453	+		EFB2_01997	0.60	-0.6
2,157,454	-		EFB2_01997	0.60	+1.1
2,157,454	-		EFB2_01997	0.60	-2.0
2,157,454	-		EFB2_01997	0.60	+2.1
2,157,462	+		EFB2_01997	0.63	+1.9
2,157,462	+		EFB2_01997	0.63	+3.0
2,157,463	-		EFB2_01997	0.63	+0.5
2,157,572	+				+0.3
2,157,572	+				-1.1
2,157,572	+				+1.3
2,157,572	+				-2.1
2,157,572	+				+0.3
2,157,572	+				+0.5
2,157,573	-				-0.1
2,157,573	-				-0.7
2,157,573	-				+1.0
2,157,573	-				-0.1
2,157,573	-				+1.1
2,157,573	-				-0.2
2,157,573	-				+0.9
2,157,573	-				-2.2
2,157,573	-				+0.6
2,157,573	-				-0.7
2,157,573	-				-0.6
2,157,578	+				-0.6
2,157,579	-				+0.4
2,157,629	-				+1.1
2,157,629	-				-0.4
2,157,629	-				-2.3
2,157,629	-				-2.5
2,157,645	+		EFB2_01998	0.10	-2.0
2,157,646	-		EFB2_01998	0.10	-0.8
2,157,754	+		EFB2_01998	0.25	-2.1
2,157,755	-		EFB2_01998	0.25	+2.6
2,157,788	+		EFB2_01998	0.29	+1.2
2,157,788	+		EFB2_01998	0.29	-0.9
2,157,788	+		EFB2_01998	0.29	+0.8
2,157,788	+		EFB2_01998	0.29	-1.5
2,157,789	-		EFB2_01998	0.30	+3.4
2,157,789	-		EFB2_01998	0.30	+1.0
2,157,789	-		EFB2_01998	0.30	-0.9
2,157,789	-		EFB2_01998	0.30	+0.5
2,157,789	-		EFB2_01998	0.30	-1.9
2,157,843	+		EFB2_01998	0.37	-1.5
2,157,868	+		EFB2_01998	0.40	+0.5
2,157,868	+		EFB2_01998	0.40	-0.7
2,157,869	-		EFB2_01998	0.40	-0.6
2,157,869	-		EFB2_01998	0.40	-0.6
2,157,897	+		EFB2_01998	0.44	+1.2
2,157,898	-		EFB2_01998	0.44	-2.8
2,157,898	-		EFB2_01998	0.44	+0.3
2,157,898	-		EFB2_01998	0.44	-3.0
2,157,983	+		EFB2_01998	0.56	+2.8
2,157,983	+		EFB2_01998	0.56	-1.6
2,157,984	-		EFB2_01998	0.56	-3.3
2,158,008	+		EFB2_01998	0.59	-0.9
2,158,008	+		EFB2_01998	0.59	-1.5
2,158,008	+		EFB2_01998	0.59	+0.1
2,158,008	+		EFB2_01998	0.59	+0.3
2,158,009	-		EFB2_01998	0.59	-3.0
2,158,009	-		EFB2_01998	0.59	+0.5
2,158,009	-		EFB2_01998	0.59	-1.1
2,158,009	-		EFB2_01998	0.59	-0.6
2,158,012	-		EFB2_01998	0.60	+0.6
2,158,045	+		EFB2_01998	0.64	+1.0
2,158,045	+		EFB2_01998	0.64	-1.0
2,158,046	-		EFB2_01998	0.64	-2.4
2,158,046	-		EFB2_01998	0.64	-0.2
2,158,046	-		EFB2_01998	0.64	-1.1
2,158,046	-		EFB2_01998	0.64	+1.3
2,158,046	-		EFB2_01998	0.64	+0.1
2,158,053	+		EFB2_01998	0.65	-1.4
2,158,053	+		EFB2_01998	0.65	+1.8
2,158,054	-		EFB2_01998	0.65	+1.9
2,158,054	-		EFB2_01998	0.65	-0.6
2,158,054	-		EFB2_01998	0.65	+0.3
2,158,091	-		EFB2_01998	0.70	-2.1
2,158,105	-		EFB2_01998	0.72	-1.7
2,158,105	-		EFB2_01998	0.72	-0.7
2,158,105	-		EFB2_01998	0.72	+0.9
2,158,105	-		EFB2_01998	0.72	-0.4
2,158,105	-		EFB2_01998	0.72	-0.4
2,158,135	+		EFB2_01998	0.76	+0.0
2,158,136	-		EFB2_01998	0.77	+0.9
2,158,136	-		EFB2_01998	0.77	-0.4
2,158,216	+		EFB2_01998	0.87	-1.9
2,158,263	+				+0.3
2,158,263	+				-1.5
2,158,264	-				+0.4
2,158,328	+				+1.6
2,158,368	+		EFB2_01999	0.16	-0.6
2,158,369	-		EFB2_01999	0.17	-3.1
2,158,400	+		EFB2_01999	0.25	-1.8
2,158,400	+		EFB2_01999	0.25	-2.5
2,158,400	+		EFB2_01999	0.25	-1.9
2,158,400	+		EFB2_01999	0.25	+0.5
2,158,401	-		EFB2_01999	0.25	-0.2
2,158,401	-		EFB2_01999	0.25	+1.5
2,158,401	-		EFB2_01999	0.25	+0.4
2,158,535	+		EFB2_01999	0.62	-2.2
2,158,557	+		EFB2_01999	0.68	+1.9
2,158,557	+		EFB2_01999	0.68	-0.0
2,158,590	-		EFB2_01999	0.77	+1.7
2,158,658	+				-0.2
2,158,658	+				-0.9
2,158,658	+				-0.9
2,158,658	+				+1.4
2,158,658	+				-1.0
2,158,658	+				+0.9
2,158,658	+				-0.4
2,158,658	+				+1.1
2,158,658	+				+3.7
2,158,658	+				-1.4
2,158,659	-				-3.0
2,158,659	-				-0.0
2,158,659	-				+3.6
2,158,659	-				+2.0
2,158,659	-				-0.6
2,158,659	-				+2.0
2,158,659	-				-1.1
2,158,659	-				-0.8
2,158,659	-				+0.9
2,158,659	-				-0.1
2,158,667	+				-0.4
2,158,667	+				+0.2
2,158,668	-				-0.5
2,158,668	-				-0.0
2,158,678	-				-0.2
2,158,737	+		EFB2_02000	0.15	-0.7
2,158,737	+		EFB2_02000	0.15	+1.9
2,158,737	+		EFB2_02000	0.15	+0.6
2,158,737	+		EFB2_02000	0.15	-0.6
2,158,737	+		EFB2_02000	0.15	-1.2
2,158,737	+		EFB2_02000	0.15	+1.5
2,158,738	-		EFB2_02000	0.15	+0.9
2,158,738	-		EFB2_02000	0.15	+2.4
2,158,738	-		EFB2_02000	0.15	-1.9
2,158,738	-		EFB2_02000	0.15	+4.0
2,158,738	-		EFB2_02000	0.15	-1.1
2,158,738	-		EFB2_02000	0.15	-1.2
2,158,738	-		EFB2_02000	0.15	-1.7
2,158,738	-		EFB2_02000	0.15	-0.9
2,158,738	-		EFB2_02000	0.15	+1.1
2,158,738	-		EFB2_02000	0.15	-1.9
2,158,738	-		EFB2_02000	0.15	+1.0
2,158,741	+		EFB2_02000	0.16	+1.5
2,158,775	+		EFB2_02000	0.24	+2.2
2,158,776	-		EFB2_02000	0.24	-1.0
2,158,776	-		EFB2_02000	0.24	-2.7
2,158,779	+		EFB2_02000	0.25	-0.5
2,158,795	+		EFB2_02000	0.29	-0.0
2,158,912	+		EFB2_02000	0.57	+1.5
2,158,913	-		EFB2_02000	0.57	+1.1
2,158,915	-		EFB2_02000	0.58	+2.2
2,158,915	-		EFB2_02000	0.58	+1.8
2,158,918	+		EFB2_02000	0.58	+0.7
2,158,918	+		EFB2_02000	0.58	-1.1
2,158,918	+		EFB2_02000	0.58	+1.8
2,158,919	-		EFB2_02000	0.59	+1.7
2,159,074	+				-1.6
2,159,116	+				-1.2
2,159,174	+				-3.0
2,159,174	+				+1.0
2,159,289	+		EFB2_02001	0.20	-3.1
2,159,290	-		EFB2_02001	0.20	+0.2
2,159,290	-		EFB2_02001	0.20	-0.9
2,159,395	-		EFB2_02001	0.31	-3.1
2,159,442	+		EFB2_02001	0.35	-1.2
2,159,442	+		EFB2_02001	0.35	+1.1
2,159,445	+		EFB2_02001	0.36	+2.6
2,159,445	+		EFB2_02001	0.36	+1.2
2,159,446	-		EFB2_02001	0.36	-1.6
2,159,446	-		EFB2_02001	0.36	+0.6
2,159,520	+		EFB2_02001	0.43	+0.3
2,159,520	+		EFB2_02001	0.43	-1.9
2,159,521	-		EFB2_02001	0.43	-0.5
2,159,521	-		EFB2_02001	0.43	-0.4
2,159,555	+		EFB2_02001	0.47	-1.9
2,159,555	+		EFB2_02001	0.47	-0.6
2,159,555	+		EFB2_02001	0.47	+0.9
2,159,556	-		EFB2_02001	0.47	-0.0
2,159,556	-		EFB2_02001	0.47	+0.1
2,159,596	-		EFB2_02001	0.51	+0.6
2,159,597	+		EFB2_02001	0.51	+1.2
2,159,597	+		EFB2_02001	0.51	-2.3
2,159,597	+		EFB2_02001	0.51	+0.1
2,159,598	-		EFB2_02001	0.51	+3.9
2,159,598	-		EFB2_02001	0.51	-0.3
2,159,598	-		EFB2_02001	0.51	-0.1
2,159,617	+		EFB2_02001	0.53	+0.6
2,159,618	-		EFB2_02001	0.53	+1.7
2,159,618	-		EFB2_02001	0.53	+0.5
2,159,653	-		EFB2_02001	0.56	+0.5