Strain Fitness in Escherichia fergusonii Becca around EFB2_01351

Experiment: BHIS no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community
1,400,469	+				-3.3
1,400,470	-				+1.3
1,400,470	-				+0.7
1,400,470	-				+0.5
1,400,472	+				-1.2
1,400,473	-				+1.3
1,400,473	-				+0.3
1,400,473	-				-1.6
1,400,509	+		EFB2_01350	0.11	-0.2
1,400,509	+		EFB2_01350	0.11	-2.3
1,400,509	+		EFB2_01350	0.11	-1.2
1,400,619	+		EFB2_01350	0.22	-0.1
1,400,619	+		EFB2_01350	0.22	+0.1
1,400,619	+		EFB2_01350	0.22	+0.8
1,400,619	+		EFB2_01350	0.22	+0.9
1,400,619	+		EFB2_01350	0.22	+1.2
1,400,620	-		EFB2_01350	0.22	+0.4
1,400,620	-		EFB2_01350	0.22	+1.5
1,400,620	-		EFB2_01350	0.22	+1.4
1,400,620	-		EFB2_01350	0.22	-2.8
1,400,622	+		EFB2_01350	0.22	-0.3
1,400,622	+		EFB2_01350	0.22	+1.5
1,400,622	+		EFB2_01350	0.22	-3.8
1,400,622	+		EFB2_01350	0.22	+2.7
1,400,623	-		EFB2_01350	0.22	-1.6
1,400,741	+		EFB2_01350	0.34	+1.1
1,400,741	+		EFB2_01350	0.34	+0.9
1,400,741	+		EFB2_01350	0.34	-1.9
1,400,741	+		EFB2_01350	0.34	-1.2
1,400,741	+		EFB2_01350	0.34	+0.6
1,400,741	+		EFB2_01350	0.34	+0.2
1,400,741	+		EFB2_01350	0.34	-0.9
1,400,741	+		EFB2_01350	0.34	-2.0
1,400,741	+		EFB2_01350	0.34	+0.8
1,400,741	+		EFB2_01350	0.34	+1.5
1,400,742	-		EFB2_01350	0.34	-0.4
1,400,742	-		EFB2_01350	0.34	+1.9
1,400,742	-		EFB2_01350	0.34	-1.9
1,400,742	-		EFB2_01350	0.34	+0.1
1,400,742	-		EFB2_01350	0.34	+0.8
1,400,742	-		EFB2_01350	0.34	-0.2
1,400,742	-		EFB2_01350	0.34	+2.8
1,400,788	-		EFB2_01350	0.39	+0.8
1,400,850	+		EFB2_01350	0.45	-0.6
1,400,850	+		EFB2_01350	0.45	+0.1
1,400,850	+		EFB2_01350	0.45	+0.7
1,400,851	-		EFB2_01350	0.45	+0.9
1,400,944	+		EFB2_01350	0.54	-2.1
1,401,049	-		EFB2_01350	0.65	+1.6
1,401,051	+		EFB2_01350	0.65	-1.6
1,401,052	-		EFB2_01350	0.65	+1.5
1,401,075	+		EFB2_01350	0.67	-0.4
1,401,075	+		EFB2_01350	0.67	+0.5
1,401,076	-		EFB2_01350	0.68	-0.9
1,401,095	+		EFB2_01350	0.69	-1.5
1,401,095	+		EFB2_01350	0.69	+0.9
1,401,096	-		EFB2_01350	0.70	-0.4
1,401,096	-		EFB2_01350	0.70	-2.4
1,401,099	-		EFB2_01350	0.70	-1.9
1,401,255	-		EFB2_01350	0.85	+0.6
1,401,260	+		EFB2_01350	0.86	+0.9
1,401,260	+		EFB2_01350	0.86	-0.1
1,401,260	+		EFB2_01350	0.86	-2.1
1,401,261	-		EFB2_01350	0.86	+0.3
1,401,261	-		EFB2_01350	0.86	-1.1
1,401,264	+		EFB2_01350	0.86	-0.6
1,401,264	+		EFB2_01350	0.86	+0.2
1,401,264	+		EFB2_01350	0.86	+0.2
1,401,264	+		EFB2_01350	0.86	+0.0
1,401,264	+		EFB2_01350	0.86	+1.7
1,401,264	+		EFB2_01350	0.86	+0.6
1,401,264	+		EFB2_01350	0.86	+2.7
1,401,265	-		EFB2_01350	0.86	+0.8
1,401,265	-		EFB2_01350	0.86	-1.6
1,401,265	-		EFB2_01350	0.86	-0.0
1,401,265	-		EFB2_01350	0.86	-1.6
1,401,265	-		EFB2_01350	0.86	-0.4
1,401,287	+		EFB2_01350	0.89	+0.8
1,401,300	+				+1.6
1,401,300	+				-1.7
1,401,300	+				-1.1
1,401,324	-				+0.2
1,401,360	+				-1.3
1,401,361	-				-0.3
1,401,384	+				+0.8
1,401,384	+				+0.8
1,401,397	+				+0.3
1,401,397	+				-2.1
1,401,398	-				+1.8
1,401,398	-				+1.4
1,401,405	-				-2.5
1,401,405	-				-1.5
1,401,446	+				-0.0
1,401,447	-				+0.2
1,401,447	-				+0.1
1,401,447	-				-1.0
1,401,452	+				+1.5
1,401,464	+				-0.0
1,401,464	+				-0.6
1,401,465	-				-2.5
1,401,465	-				-0.2
1,401,486	+				-0.5
1,401,486	+				+2.3
1,401,486	+				+1.0
1,401,486	+				-0.5
1,401,486	+				-0.3
1,401,486	+				-1.2
1,401,486	+				-0.7
1,401,486	+				+0.0
1,401,487	-				+0.5
1,401,487	-				+1.2
1,401,487	-				+1.6
1,401,487	-				-1.2
1,401,487	-				+1.4
1,401,487	-				+0.6
1,401,487	-				+0.4
1,401,487	-				-0.9
1,401,487	-				-2.3
1,401,490	+				-2.2
1,401,490	+				-1.1
1,401,491	-				-0.2
1,401,491	-				+0.3
1,401,491	-				-0.1
1,401,546	-				-2.6
1,401,553	+				+1.2
1,401,553	+				+0.6
1,401,554	-				-1.0
1,401,560	+				+1.3
1,401,561	-				+0.1
1,401,600	+		EFB2_01351	0.13	+1.6
1,401,600	+		EFB2_01351	0.13	+0.9
1,401,600	+		EFB2_01351	0.13	+0.4
1,401,600	+		EFB2_01351	0.13	-1.6
1,401,600	+		EFB2_01351	0.13	-0.5
1,401,600	+		EFB2_01351	0.13	-1.1
1,401,600	+		EFB2_01351	0.13	-1.4
1,401,600	+		EFB2_01351	0.13	-1.2
1,401,600	+		EFB2_01351	0.13	-2.6
1,401,600	+		EFB2_01351	0.13	-3.1
1,401,600	+		EFB2_01351	0.13	-1.8
1,401,600	+		EFB2_01351	0.13	-1.4
1,401,600	+		EFB2_01351	0.13	+0.0
1,401,600	+		EFB2_01351	0.13	+1.9
1,401,600	+		EFB2_01351	0.13	-0.0
1,401,600	+		EFB2_01351	0.13	+1.3
1,401,600	+		EFB2_01351	0.13	-0.9
1,401,600	+		EFB2_01351	0.13	+2.6
1,401,600	+		EFB2_01351	0.13	+0.8
1,401,600	+		EFB2_01351	0.13	+0.0
1,401,600	+		EFB2_01351	0.13	+2.8
1,401,600	+		EFB2_01351	0.13	+0.5
1,401,600	+		EFB2_01351	0.13	-0.2
1,401,600	+		EFB2_01351	0.13	-1.1
1,401,600	+		EFB2_01351	0.13	+0.5
1,401,601	-		EFB2_01351	0.13	-0.9
1,401,601	-		EFB2_01351	0.13	+0.5
1,401,601	-		EFB2_01351	0.13	-0.6
1,401,601	-		EFB2_01351	0.13	-1.5
1,401,601	-		EFB2_01351	0.13	-0.8
1,401,601	-		EFB2_01351	0.13	-2.0
1,401,601	-		EFB2_01351	0.13	+0.3
1,401,601	-		EFB2_01351	0.13	+0.3
1,401,601	-		EFB2_01351	0.13	-2.5
1,401,601	-		EFB2_01351	0.13	-1.2
1,401,601	-		EFB2_01351	0.13	+0.4
1,401,601	-		EFB2_01351	0.13	+0.0
1,401,601	-		EFB2_01351	0.13	-0.3
1,401,601	-		EFB2_01351	0.13	-0.7
1,401,601	-		EFB2_01351	0.13	-0.8
1,401,601	-		EFB2_01351	0.13	+3.9
1,401,601	-		EFB2_01351	0.13	-0.1
1,401,601	-		EFB2_01351	0.13	-1.6
1,401,601	-		EFB2_01351	0.13	+1.3
1,401,601	-		EFB2_01351	0.13	+0.3
1,401,601	-		EFB2_01351	0.13	-3.8
1,401,601	-		EFB2_01351	0.13	-0.6
1,401,601	-		EFB2_01351	0.13	-0.2
1,401,601	-		EFB2_01351	0.13	-0.0
1,401,601	-		EFB2_01351	0.13	+2.4
1,401,601	-		EFB2_01351	0.13	+0.6
1,401,601	-		EFB2_01351	0.13	+2.1
1,401,602	+		EFB2_01351	0.13	-1.1
1,401,602	+		EFB2_01351	0.13	+0.9
1,401,602	+		EFB2_01351	0.13	-0.2
1,401,602	+		EFB2_01351	0.13	+0.5
1,401,602	+		EFB2_01351	0.13	-2.5
1,401,602	+		EFB2_01351	0.13	+0.5
1,401,602	+		EFB2_01351	0.13	-0.7
1,401,602	+		EFB2_01351	0.13	-0.6
1,401,602	+		EFB2_01351	0.13	-1.6
1,401,602	+		EFB2_01351	0.13	-3.3
1,401,602	+		EFB2_01351	0.13	-0.2
1,401,602	+		EFB2_01351	0.13	+1.8
1,401,602	+		EFB2_01351	0.13	-0.4
1,401,602	+		EFB2_01351	0.13	+0.5
1,401,602	+		EFB2_01351	0.13	+0.5
1,401,602	+		EFB2_01351	0.13	+1.6
1,401,602	+		EFB2_01351	0.13	+0.3
1,401,602	+		EFB2_01351	0.13	+2.2
1,401,602	+		EFB2_01351	0.13	-1.2
1,401,602	+		EFB2_01351	0.13	+0.9
1,401,602	+		EFB2_01351	0.13	-4.0
1,401,602	+		EFB2_01351	0.13	-1.1
1,401,602	+		EFB2_01351	0.13	+0.9
1,401,602	+		EFB2_01351	0.13	+0.5
1,401,602	+		EFB2_01351	0.13	+0.2
1,401,602	+		EFB2_01351	0.13	+0.9
1,401,602	+		EFB2_01351	0.13	+2.4
1,401,602	+		EFB2_01351	0.13	-0.7
1,401,602	+		EFB2_01351	0.13	+0.4
1,401,602	+		EFB2_01351	0.13	-0.9
1,401,602	+		EFB2_01351	0.13	-0.3
1,401,602	+		EFB2_01351	0.13	-0.7
1,401,602	+		EFB2_01351	0.13	+0.8
1,401,602	+		EFB2_01351	0.13	-0.9
1,401,602	+		EFB2_01351	0.13	+0.1
1,401,602	+		EFB2_01351	0.13	+0.3
1,401,602	+		EFB2_01351	0.13	+1.2
1,401,602	+		EFB2_01351	0.13	+0.9
1,401,602	+		EFB2_01351	0.13	-1.0
1,401,603	-		EFB2_01351	0.13	-2.2
1,401,603	-		EFB2_01351	0.13	+0.2
1,401,603	-		EFB2_01351	0.13	+0.4
1,401,603	-		EFB2_01351	0.13	+0.6
1,401,603	-		EFB2_01351	0.13	-0.5
1,401,603	-		EFB2_01351	0.13	+4.4
1,401,603	-		EFB2_01351	0.13	-3.5
1,401,603	-		EFB2_01351	0.13	+4.0
1,401,603	-		EFB2_01351	0.13	+0.7
1,401,603	-		EFB2_01351	0.13	+0.5
1,401,603	-		EFB2_01351	0.13	+0.1
1,401,603	-		EFB2_01351	0.13	-2.2
1,401,603	-		EFB2_01351	0.13	-0.1
1,401,603	-		EFB2_01351	0.13	+0.5
1,401,603	-		EFB2_01351	0.13	-2.1
1,401,603	-		EFB2_01351	0.13	+3.1
1,401,603	-		EFB2_01351	0.13	+0.9
1,401,603	-		EFB2_01351	0.13	-0.9
1,401,603	-		EFB2_01351	0.13	-1.6
1,401,603	-		EFB2_01351	0.13	+0.8
1,401,603	-		EFB2_01351	0.13	-1.5
1,401,603	-		EFB2_01351	0.13	-0.7
1,401,603	-		EFB2_01351	0.13	-0.2
1,401,603	-		EFB2_01351	0.13	+1.1
1,401,603	-		EFB2_01351	0.13	+0.7
1,401,603	-		EFB2_01351	0.13	-1.5
1,401,603	-		EFB2_01351	0.13	+1.3
1,401,603	-		EFB2_01351	0.13	-1.1
1,401,603	-		EFB2_01351	0.13	+1.3
1,401,603	-		EFB2_01351	0.13	+0.5
1,401,603	-		EFB2_01351	0.13	+0.1
1,401,603	-		EFB2_01351	0.13	-0.9
1,401,603	-		EFB2_01351	0.13	+1.1
1,401,603	-		EFB2_01351	0.13	-0.5
1,401,603	-		EFB2_01351	0.13	-0.1
1,401,603	-		EFB2_01351	0.13	-1.9
1,401,603	-		EFB2_01351	0.13	-1.6
1,401,603	-		EFB2_01351	0.13	-1.4
1,401,603	-		EFB2_01351	0.13	-2.4
1,401,603	-		EFB2_01351	0.13	-1.7
1,401,603	-		EFB2_01351	0.13	-1.3
1,401,603	-		EFB2_01351	0.13	-0.4
1,401,603	-		EFB2_01351	0.13	-0.8
1,401,603	-		EFB2_01351	0.13	-1.9
1,401,603	-		EFB2_01351	0.13	-1.2
1,401,603	-		EFB2_01351	0.13	+1.3
1,401,603	-		EFB2_01351	0.13	-2.6
1,401,603	-		EFB2_01351	0.13	-0.1
1,401,603	-		EFB2_01351	0.13	-2.9
1,401,603	-		EFB2_01351	0.13	-0.2
1,401,603	-		EFB2_01351	0.13	+1.6
1,401,603	-		EFB2_01351	0.13	+0.3
1,401,603	-		EFB2_01351	0.13	+0.9
1,401,603	-		EFB2_01351	0.13	+3.2
1,401,603	-		EFB2_01351	0.13	-0.2
1,401,603	-		EFB2_01351	0.13	-0.6
1,401,603	-		EFB2_01351	0.13	-1.9
1,401,603	-		EFB2_01351	0.13	-0.9
1,401,603	-		EFB2_01351	0.13	+1.4
1,401,603	-		EFB2_01351	0.13	+1.4
1,401,603	-		EFB2_01351	0.13	+1.4
1,401,603	-		EFB2_01351	0.13	+1.2
1,401,606	+		EFB2_01351	0.13	+0.4
1,401,606	+		EFB2_01351	0.13	-0.2
1,401,606	+		EFB2_01351	0.13	+0.9
1,401,606	+		EFB2_01351	0.13	-2.1
1,401,606	+		EFB2_01351	0.13	-0.2
1,401,606	+		EFB2_01351	0.13	-0.5
1,401,606	+		EFB2_01351	0.13	+2.6
1,401,606	+		EFB2_01351	0.13	-0.3
1,401,606	+		EFB2_01351	0.13	+0.6
1,401,606	+		EFB2_01351	0.13	+0.5
1,401,606	+		EFB2_01351	0.13	+0.2
1,401,606	+		EFB2_01351	0.13	+0.2
1,401,606	+		EFB2_01351	0.13	-3.0
1,401,606	+		EFB2_01351	0.13	-2.1
1,401,606	+		EFB2_01351	0.13	-1.5
1,401,606	+		EFB2_01351	0.13	-1.4
1,401,606	+		EFB2_01351	0.13	-0.5
1,401,607	-		EFB2_01351	0.13	+2.1
1,401,607	-		EFB2_01351	0.13	-0.9
1,401,607	-		EFB2_01351	0.13	-1.3
1,401,607	-		EFB2_01351	0.13	+1.2
1,401,607	-		EFB2_01351	0.13	-0.6
1,401,607	-		EFB2_01351	0.13	+1.7
1,401,607	-		EFB2_01351	0.13	-2.4
1,401,607	-		EFB2_01351	0.13	-1.3
1,401,607	-		EFB2_01351	0.13	-1.0
1,401,607	-		EFB2_01351	0.13	+0.3
1,401,607	-		EFB2_01351	0.13	-1.5
1,401,607	-		EFB2_01351	0.13	+0.1
1,401,642	-		EFB2_01351	0.17	+1.5
1,401,650	-		EFB2_01351	0.17	+0.1
1,401,650	-		EFB2_01351	0.17	-1.6
1,401,651	+		EFB2_01351	0.18	-0.3
1,401,651	+		EFB2_01351	0.18	-2.9
1,401,651	+		EFB2_01351	0.18	-1.8
1,401,651	+		EFB2_01351	0.18	+1.2
1,401,651	+		EFB2_01351	0.18	+0.6
1,401,651	+		EFB2_01351	0.18	-2.3
1,401,652	-		EFB2_01351	0.18	+0.5
1,401,652	-		EFB2_01351	0.18	+0.3
1,401,652	-		EFB2_01351	0.18	-2.8
1,401,652	-		EFB2_01351	0.18	-0.7
1,401,652	-		EFB2_01351	0.18	-2.7
1,401,652	-		EFB2_01351	0.18	-2.3
1,401,652	-		EFB2_01351	0.18	-0.6
1,401,662	+		EFB2_01351	0.19	-2.4
1,401,662	+		EFB2_01351	0.19	-1.0
1,401,662	+		EFB2_01351	0.19	+0.0
1,401,662	+		EFB2_01351	0.19	+2.5
1,401,663	-		EFB2_01351	0.19	-0.1
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1,402,470	+				-3.1
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1,403,408	+				-3.8
1,403,408	+				-0.4
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1,403,413	+				+0.1