Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03840

Experiment: Pectin from apple; autoclaved 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple; autoclaved 2.5 mg/mL (C)
188,352	+		BACOVA_03839	0.27	+0.7
188,369	+		BACOVA_03839	0.28	-1.3
188,369	+		BACOVA_03839	0.28	+1.4
188,570	+		BACOVA_03839	0.43	+0.9
188,571	-		BACOVA_03839	0.43	-0.0
188,571	-		BACOVA_03839	0.43	-0.1
188,574	+		BACOVA_03839	0.43	+0.1
188,622	+		BACOVA_03839	0.47	+0.3
188,635	+		BACOVA_03839	0.48	-0.2
188,635	+		BACOVA_03839	0.48	+0.3
188,680	-		BACOVA_03839	0.51	-0.7
188,692	-		BACOVA_03839	0.52	+0.7
188,706	-		BACOVA_03839	0.53	+0.7
188,749	+		BACOVA_03839	0.56	-0.3
188,750	-		BACOVA_03839	0.56	-1.1
188,757	+		BACOVA_03839	0.57	+0.5
188,807	+		BACOVA_03839	0.60	+1.4
188,824	+		BACOVA_03839	0.62	+1.0
188,846	-		BACOVA_03839	0.63	-0.3
188,918	-		BACOVA_03839	0.69	+0.2
188,963	+		BACOVA_03839	0.72	-2.0
189,029	-		BACOVA_03839	0.77	-0.9
189,032	+		BACOVA_03839	0.77	+0.1
189,032	+		BACOVA_03839	0.77	-1.4
189,039	-		BACOVA_03839	0.78	+0.5
189,039	-		BACOVA_03839	0.78	-0.1
189,039	-		BACOVA_03839	0.78	+0.1
189,061	+		BACOVA_03839	0.79	-0.5
189,062	-		BACOVA_03839	0.79	-0.1
189,062	-		BACOVA_03839	0.79	+0.4
189,117	-		BACOVA_03839	0.83	+0.4
189,132	+		BACOVA_03839	0.84	-0.0
189,132	+		BACOVA_03839	0.84	-0.9
189,133	-		BACOVA_03839	0.84	-0.5
189,135	+		BACOVA_03839	0.85	+1.0
189,136	-		BACOVA_03839	0.85	-0.6
189,138	-		BACOVA_03839	0.85	-1.5
189,154	-		BACOVA_03839	0.86	+0.7
189,154	-		BACOVA_03839	0.86	+0.5
189,154	-		BACOVA_03839	0.86	+0.7
189,188	+		BACOVA_03839	0.89	-0.5
189,189	-		BACOVA_03839	0.89	+0.7
189,210	+				-0.1
189,211	-				+0.5
189,219	+				+0.3
189,220	-				-2.1
189,223	+				-0.1
189,223	+				-0.9
189,275	+				-0.4
189,276	-				-0.9
189,300	-				-1.1
189,300	-				-0.8
189,307	+				-0.5
189,323	+				+1.1
189,324	-				-0.5
189,411	-		BACOVA_03840	0.69	+0.1
189,457	-				+0.9
189,472	-				-0.7
189,477	+				+0.9
189,480	+				-0.4
189,480	+				-0.1
189,481	-				+0.2
189,481	-				+0.0
189,486	+				+1.5
189,488	+				+0.3
189,489	-				+0.7
189,489	-				+0.7
189,489	-				-0.7
189,489	-				-2.0
189,494	-				-0.3
189,579	-				-0.7
189,610	+				+0.3
189,610	+				+0.5
189,610	+				-1.5
189,628	-				+0.0
189,643	+				+0.2
189,643	+				-1.4
189,649	+				-0.7
189,668	-				+1.2
189,697	+				+1.7
189,698	-				-0.4
189,698	-				+0.6
189,702	+				-0.8
189,711	-				-1.5
189,713	-				-2.4
189,716	+				+0.6
189,732	-				-0.4
189,819	+				+1.2
189,819	+				-0.7
189,819	+				+0.3
189,819	+				+0.6
189,820	-				+0.1
189,820	-				+0.8
189,821	+				-1.4
189,821	+				-0.3
189,822	-				-0.4
189,827	-				-0.1
189,853	-		BACOVA_03841	0.12	+0.7
189,868	-		BACOVA_03841	0.15	+0.8
189,868	-		BACOVA_03841	0.15	-0.7
189,945	-		BACOVA_03841	0.33	-0.0
189,956	-		BACOVA_03841	0.35	+0.5
189,988	-		BACOVA_03841	0.42	+0.5
189,991	-		BACOVA_03841	0.43	-0.9
190,057	+		BACOVA_03841	0.58	+0.4
190,057	+		BACOVA_03841	0.58	-0.1
190,071	+		BACOVA_03841	0.61	-1.0
190,075	+		BACOVA_03841	0.62	+0.9
190,097	+		BACOVA_03841	0.67	+0.4
190,126	-		BACOVA_03841	0.73	-0.4
190,194	-		BACOVA_03841	0.89	-2.0
190,235	+				+1.1
190,244	-				+0.9
190,305	+				-0.4
190,312	-		BACOVA_03842	0.11	+0.3
190,344	+		BACOVA_03842	0.20	-0.7
190,382	+		BACOVA_03842	0.31	+1.0
190,383	-		BACOVA_03842	0.31	-1.1
190,411	+		BACOVA_03842	0.39	-1.5