Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02236

Experiment: Pectin from apple; autoclaved 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple; autoclaved 2.5 mg/mL (C)
14,671	+		BACOVA_02232	0.28	-2.2
14,671	+		BACOVA_02232	0.28	+1.8
14,673	+		BACOVA_02232	0.29	-0.0
14,673	+		BACOVA_02232	0.29	-0.2
14,677	-		BACOVA_02232	0.32	+0.1
14,713	+		BACOVA_02232	0.57	-2.2
14,714	-		BACOVA_02232	0.58	+0.3
14,718	-		BACOVA_02232	0.61	-0.5
14,718	-		BACOVA_02232	0.61	+2.7
14,718	-		BACOVA_02232	0.61	+1.2
14,718	-		BACOVA_02232	0.61	-0.4
14,760	-				-0.8
14,817	+		BACOVA_02233	0.14	-0.5
14,872	-		BACOVA_02233	0.67	-1.6
14,872	-		BACOVA_02233	0.67	-0.7
14,883	+		BACOVA_02233	0.77	+1.7
14,897	-				+0.2
14,979	+				-0.6
15,016	-				-0.3
15,102	+		BACOVA_02235	0.38	+0.6
15,157	-				-2.2
15,160	-				-3.6
15,162	-				-3.2
15,162	-				-1.3
15,188	+		BACOVA_02234	0.10	-2.0
15,243	+		BACOVA_02234	0.23	-2.2
15,291	-		BACOVA_02234	0.34	-0.9
15,295	-		BACOVA_02234	0.35	-1.5
15,300	-		BACOVA_02234	0.36	-2.0
15,300	-		BACOVA_02234	0.36	-0.8
15,300	-		BACOVA_02234	0.36	-1.0
15,320	-		BACOVA_02234	0.41	-1.3
15,405	-		BACOVA_02234	0.61	-2.3
15,487	-		BACOVA_02234	0.80	-1.8
15,493	+		BACOVA_02234	0.82	-0.0
15,507	-		BACOVA_02234	0.85	-1.7
15,507	-		BACOVA_02234	0.85	-0.6
15,561	-				-0.8
15,569	-				-2.9
15,569	-				-0.8
15,578	-				-0.3
15,617	-				-0.6
15,617	-				-0.8
15,617	-				-1.3
15,644	+				-0.0
15,644	+				-0.8
15,880	-		BACOVA_02236	0.32	-1.2
15,889	-		BACOVA_02236	0.33	-1.3
15,907	+		BACOVA_02236	0.34	-1.3
15,908	-		BACOVA_02236	0.35	-0.5
15,922	+		BACOVA_02236	0.36	-0.0
15,972	-		BACOVA_02236	0.41	-1.9
15,991	+		BACOVA_02236	0.43	-0.0
15,992	-		BACOVA_02236	0.43	-3.9
15,995	+		BACOVA_02236	0.44	-0.0
16,097	-		BACOVA_02236	0.54	-1.6
16,179	-		BACOVA_02236	0.63	-1.7
16,181	-		BACOVA_02236	0.63	-1.8
16,196	-		BACOVA_02236	0.65	-2.0
16,219	+		BACOVA_02236	0.67	+0.4
16,219	+		BACOVA_02236	0.67	-1.3
16,229	-		BACOVA_02236	0.68	-1.2
16,241	-		BACOVA_02236	0.69	-2.7
16,308	-		BACOVA_02236	0.77	-0.1
16,445	-				-1.6
16,445	-				-0.0
16,496	+				-0.5
16,530	-				-1.7
16,530	-				-2.4
16,530	-				-0.8
16,545	+				-0.7
16,555	+				-1.5
16,600	+				-1.6
16,723	-		BACOVA_02237	0.12	-0.0
16,730	-		BACOVA_02237	0.13	-1.5
16,807	+		BACOVA_02237	0.19	-1.3
16,840	+		BACOVA_02237	0.21	-2.5
16,987	+		BACOVA_02237	0.32	-1.7
17,116	-		BACOVA_02237	0.42	-1.5
17,177	-		BACOVA_02237	0.46	-2.3
17,180	-		BACOVA_02237	0.47	-2.3
17,207	-		BACOVA_02237	0.49	-0.6
17,329	+		BACOVA_02237	0.58	-1.5
17,330	-		BACOVA_02237	0.58	-2.3
17,330	-		BACOVA_02237	0.58	-1.8
17,525	-		BACOVA_02237	0.72	-1.2