Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03087

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03087 and MPMX26_03088 overlap by 56 nucleotidesMPMX26_03088 and MPMX26_03089 are separated by 90 nucleotides MPMX26_03087: MPMX26_03087 - IS5 family transposase ISAha3, at 2,110 to 2,721 _03087 MPMX26_03088: MPMX26_03088 - hypothetical protein, at 2,666 to 3,340 _03088 MPMX26_03089: MPMX26_03089 - hypothetical protein, at 3,431 to 3,748 _03089 Position (kb) 2 3Strain fitness (log2 ratio) -2 -1 0 1at 1.138 kb on - strandat 1.966 kb on - strandat 2.367 kb on + strand, within MPMX26_03087at 2.367 kb on + strand, within MPMX26_03087at 2.378 kb on + strand, within MPMX26_03087at 2.591 kb on + strand, within MPMX26_03087at 2.591 kb on + strand, within MPMX26_03087at 2.748 kb on + strand, within MPMX26_03088at 2.756 kb on - strand, within MPMX26_03088at 2.771 kb on + strand, within MPMX26_03088at 2.962 kb on + strand, within MPMX26_03088at 2.969 kb on + strand, within MPMX26_03088at 3.014 kb on + strand, within MPMX26_03088at 3.060 kb on + strand, within MPMX26_03088at 3.159 kb on + strand, within MPMX26_03088at 3.187 kb on + strand, within MPMX26_03088at 3.200 kb on + strand, within MPMX26_03088at 3.223 kb on + strand, within MPMX26_03088at 3.265 kb on - strand, within MPMX26_03088at 3.385 kb on + strandat 3.424 kb on - strandat 3.424 kb on - strandat 3.523 kb on - strand, within MPMX26_03089

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,138 - +0.8
1,966 - -0.8
2,367 + MPMX26_03087 0.42 -1.3
2,367 + MPMX26_03087 0.42 +0.2
2,378 + MPMX26_03087 0.44 -1.6
2,591 + MPMX26_03087 0.79 -0.6
2,591 + MPMX26_03087 0.79 -1.3
2,748 + MPMX26_03088 0.12 -1.0
2,756 - MPMX26_03088 0.13 +0.3
2,771 + MPMX26_03088 0.16 +0.5
2,962 + MPMX26_03088 0.44 +1.5
2,969 + MPMX26_03088 0.45 +0.4
3,014 + MPMX26_03088 0.52 +0.3
3,060 + MPMX26_03088 0.58 -0.0
3,159 + MPMX26_03088 0.73 -2.0
3,187 + MPMX26_03088 0.77 -2.5
3,200 + MPMX26_03088 0.79 +0.2
3,223 + MPMX26_03088 0.83 -1.5
3,265 - MPMX26_03088 0.89 -0.3
3,385 + -1.8
3,424 - -2.0
3,424 - -0.2
3,523 - MPMX26_03089 0.29 +0.3

Or see this region's nucleotide sequence