Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03075

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03075 and MPMX26_03076 are separated by 63 nucleotidesMPMX26_03076 and MPMX26_03077 are separated by 236 nucleotides MPMX26_03075: MPMX26_03075 - hypothetical protein, at 1 to 894 _03075 MPMX26_03076: MPMX26_03076 - hypothetical protein, at 958 to 1,521 _03076 MPMX26_03077: MPMX26_03077 - 2-isopropylmalate synthase, at 1,758 to 3,104 _03077 Position (kb) 0 1Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 0.062 kb on + strandat 0.130 kb on + strand, within MPMX26_03075at 0.130 kb on + strand, within MPMX26_03075at 0.130 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.132 kb on + strand, within MPMX26_03075at 0.162 kb on + strand, within MPMX26_03075at 0.162 kb on + strand, within MPMX26_03075at 0.162 kb on + strand, within MPMX26_03075at 0.164 kb on + strand, within MPMX26_03075at 0.164 kb on + strand, within MPMX26_03075at 0.230 kb on + strand, within MPMX26_03075at 0.231 kb on + strand, within MPMX26_03075at 0.235 kb on + strand, within MPMX26_03075at 0.241 kb on - strand, within MPMX26_03075at 0.283 kb on - strand, within MPMX26_03075at 0.355 kb on + strand, within MPMX26_03075at 0.395 kb on - strand, within MPMX26_03075at 0.400 kb on + strand, within MPMX26_03075at 0.402 kb on + strand, within MPMX26_03075at 0.402 kb on + strand, within MPMX26_03075at 0.402 kb on + strand, within MPMX26_03075at 0.412 kb on + strand, within MPMX26_03075at 0.419 kb on + strand, within MPMX26_03075at 0.419 kb on + strand, within MPMX26_03075at 0.421 kb on + strand, within MPMX26_03075at 0.421 kb on + strand, within MPMX26_03075at 0.455 kb on - strand, within MPMX26_03075at 0.549 kb on + strand, within MPMX26_03075at 0.559 kb on + strand, within MPMX26_03075at 0.559 kb on + strand, within MPMX26_03075at 0.702 kb on + strand, within MPMX26_03075at 0.711 kb on + strand, within MPMX26_03075at 0.726 kb on + strand, within MPMX26_03075at 0.787 kb on + strand, within MPMX26_03075at 0.855 kb on + strandat 0.888 kb on + strandat 0.905 kb on - strandat 0.948 kb on + strandat 0.948 kb on + strandat 0.948 kb on + strandat 0.954 kb on - strandat 0.956 kb on - strandat 0.956 kb on - strandat 0.956 kb on - strandat 0.956 kb on - strandat 0.980 kb on + strandat 0.980 kb on + strandat 0.988 kb on - strandat 0.988 kb on - strandat 0.988 kb on - strandat 0.988 kb on - strandat 0.988 kb on - strandat 0.988 kb on - strandat 0.990 kb on - strandat 0.990 kb on - strandat 0.992 kb on + strandat 0.992 kb on + strandat 0.992 kb on + strandat 0.992 kb on + strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.000 kb on - strandat 1.008 kb on - strandat 1.048 kb on + strand, within MPMX26_03076at 1.048 kb on + strand, within MPMX26_03076at 1.048 kb on + strand, within MPMX26_03076at 1.056 kb on - strand, within MPMX26_03076at 1.087 kb on + strand, within MPMX26_03076at 1.108 kb on + strand, within MPMX26_03076at 1.112 kb on - strand, within MPMX26_03076at 1.171 kb on + strand, within MPMX26_03076at 1.171 kb on + strand, within MPMX26_03076at 1.241 kb on + strand, within MPMX26_03076at 1.257 kb on - strand, within MPMX26_03076at 1.265 kb on - strand, within MPMX26_03076at 1.265 kb on - strand, within MPMX26_03076at 1.286 kb on + strand, within MPMX26_03076at 1.296 kb on + strand, within MPMX26_03076at 1.319 kb on - strand, within MPMX26_03076at 1.322 kb on + strand, within MPMX26_03076at 1.322 kb on + strand, within MPMX26_03076at 1.324 kb on + strand, within MPMX26_03076at 1.325 kb on - strand, within MPMX26_03076at 1.330 kb on - strand, within MPMX26_03076at 1.403 kb on + strand, within MPMX26_03076at 1.403 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.404 kb on + strand, within MPMX26_03076at 1.411 kb on - strand, within MPMX26_03076at 1.412 kb on - strand, within MPMX26_03076at 1.412 kb on - strand, within MPMX26_03076at 1.412 kb on - strand, within MPMX26_03076at 1.417 kb on + strand, within MPMX26_03076at 1.424 kb on + strand, within MPMX26_03076at 1.424 kb on + strand, within MPMX26_03076at 1.429 kb on + strand, within MPMX26_03076at 1.430 kb on - strand, within MPMX26_03076at 1.434 kb on + strand, within MPMX26_03076at 1.441 kb on + strand, within MPMX26_03076at 1.442 kb on - strand, within MPMX26_03076at 1.453 kb on - strand, within MPMX26_03076at 1.467 kb on + strandat 1.472 kb on + strandat 1.474 kb on + strandat 1.474 kb on + strandat 1.474 kb on + strandat 1.474 kb on + strandat 1.474 kb on + strandat 1.474 kb on - strandat 1.482 kb on - strandat 1.486 kb on + strandat 1.487 kb on - strandat 1.487 kb on - strandat 1.507 kb on - strandat 1.509 kb on + strandat 1.509 kb on + strandat 1.510 kb on + strandat 1.511 kb on + strandat 1.570 kb on + strandat 1.600 kb on - strandat 1.611 kb on + strandat 1.694 kb on - strandat 1.737 kb on - strandat 1.754 kb on - strandat 1.806 kb on - strandat 1.823 kb on - strandat 1.887 kb on - strandat 1.887 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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62 + +2.2
130 + MPMX26_03075 0.14 -2.9
130 + MPMX26_03075 0.14 +0.8
130 + MPMX26_03075 0.14 +0.2
132 + MPMX26_03075 0.15 -1.4
132 + MPMX26_03075 0.15 +0.4
132 + MPMX26_03075 0.15 -1.4
132 + MPMX26_03075 0.15 -2.0
132 + MPMX26_03075 0.15 +1.0
132 + MPMX26_03075 0.15 -2.4
132 + MPMX26_03075 0.15 +2.2
132 + MPMX26_03075 0.15 -1.3
132 + MPMX26_03075 0.15 +2.1
132 + MPMX26_03075 0.15 -0.9
132 + MPMX26_03075 0.15 -1.8
132 + MPMX26_03075 0.15 +0.0
132 + MPMX26_03075 0.15 -1.8
132 + MPMX26_03075 0.15 -0.7
132 + MPMX26_03075 0.15 -1.1
132 + MPMX26_03075 0.15 -1.7
132 + MPMX26_03075 0.15 +0.7
162 + MPMX26_03075 0.18 -1.8
162 + MPMX26_03075 0.18 +1.6
162 + MPMX26_03075 0.18 -1.0
164 + MPMX26_03075 0.18 +1.3
164 + MPMX26_03075 0.18 +1.8
230 + MPMX26_03075 0.26 -2.2
231 + MPMX26_03075 0.26 +0.8
235 + MPMX26_03075 0.26 -1.6
241 - MPMX26_03075 0.27 +0.2
283 - MPMX26_03075 0.32 -0.6
355 + MPMX26_03075 0.40 +0.2
395 - MPMX26_03075 0.44 -0.2
400 + MPMX26_03075 0.45 -1.8
402 + MPMX26_03075 0.45 -2.0
402 + MPMX26_03075 0.45 -0.8
402 + MPMX26_03075 0.45 -1.0
412 + MPMX26_03075 0.46 -1.6
419 + MPMX26_03075 0.47 -2.6
419 + MPMX26_03075 0.47 +1.1
421 + MPMX26_03075 0.47 +0.6
421 + MPMX26_03075 0.47 +0.0
455 - MPMX26_03075 0.51 +0.4
549 + MPMX26_03075 0.61 -0.0
559 + MPMX26_03075 0.62 -0.4
559 + MPMX26_03075 0.62 +0.4
702 + MPMX26_03075 0.78 -1.1
711 + MPMX26_03075 0.79 -1.2
726 + MPMX26_03075 0.81 -0.8
787 + MPMX26_03075 0.88 -1.8
855 + +1.4
888 + -0.4
905 - +0.3
948 + -0.2
948 + +0.4
948 + -0.8
954 - -0.3
956 - -0.3
956 - +0.0
956 - +0.8
956 - +0.3
980 + -0.5
980 + +0.5
988 - -0.2
988 - -0.7
988 - +0.1
988 - -0.5
988 - +1.5
988 - -1.2
990 - +0.7
990 - -0.6
992 + +0.8
992 + +0.6
992 + +1.5
992 + -0.1
1,000 - +0.6
1,000 - -0.1
1,000 - +0.2
1,000 - -1.1
1,000 - -0.6
1,000 - +0.5
1,000 - +0.9
1,000 - +0.3
1,000 - -0.6
1,008 - +0.2
1,048 + MPMX26_03076 0.16 +0.2
1,048 + MPMX26_03076 0.16 -0.1
1,048 + MPMX26_03076 0.16 -0.1
1,056 - MPMX26_03076 0.17 +0.2
1,087 + MPMX26_03076 0.23 -0.3
1,108 + MPMX26_03076 0.27 +0.1
1,112 - MPMX26_03076 0.27 +0.0
1,171 + MPMX26_03076 0.38 -0.8
1,171 + MPMX26_03076 0.38 +0.2
1,241 + MPMX26_03076 0.50 +0.2
1,257 - MPMX26_03076 0.53 +1.0
1,265 - MPMX26_03076 0.54 +0.4
1,265 - MPMX26_03076 0.54 +0.7
1,286 + MPMX26_03076 0.58 +0.0
1,296 + MPMX26_03076 0.60 +0.4
1,319 - MPMX26_03076 0.64 -0.4
1,322 + MPMX26_03076 0.65 +0.0
1,322 + MPMX26_03076 0.65 -0.4
1,324 + MPMX26_03076 0.65 -0.1
1,325 - MPMX26_03076 0.65 +0.1
1,330 - MPMX26_03076 0.66 -1.8
1,403 + MPMX26_03076 0.79 +0.2
1,403 + MPMX26_03076 0.79 +0.3
1,404 + MPMX26_03076 0.79 -0.2
1,404 + MPMX26_03076 0.79 +0.7
1,404 + MPMX26_03076 0.79 -1.1
1,404 + MPMX26_03076 0.79 -0.6
1,404 + MPMX26_03076 0.79 -0.1
1,404 + MPMX26_03076 0.79 +0.1
1,404 + MPMX26_03076 0.79 +0.5
1,404 + MPMX26_03076 0.79 -0.1
1,404 + MPMX26_03076 0.79 -0.1
1,411 - MPMX26_03076 0.80 -0.3
1,412 - MPMX26_03076 0.80 +0.0
1,412 - MPMX26_03076 0.80 +0.3
1,412 - MPMX26_03076 0.80 -1.3
1,417 + MPMX26_03076 0.81 -0.2
1,424 + MPMX26_03076 0.83 -0.3
1,424 + MPMX26_03076 0.83 +1.0
1,429 + MPMX26_03076 0.84 -0.0
1,430 - MPMX26_03076 0.84 -0.6
1,434 + MPMX26_03076 0.84 -0.6
1,441 + MPMX26_03076 0.86 +0.3
1,442 - MPMX26_03076 0.86 +0.1
1,453 - MPMX26_03076 0.88 +0.5
1,467 + +0.6
1,472 + +1.6
1,474 + +0.0
1,474 + -0.1
1,474 + +0.6
1,474 + -0.1
1,474 + +0.3
1,474 - +0.1
1,482 - +1.4
1,486 + +0.1
1,487 - +0.2
1,487 - -0.1
1,507 - -0.1
1,509 + -1.4
1,509 + +0.3
1,510 + +0.2
1,511 + -0.8
1,570 + +0.3
1,600 - -0.4
1,611 + +0.1
1,694 - +0.4
1,737 - +0.1
1,754 - +0.5
1,806 - +0.5
1,823 - -0.9
1,887 - -0.1
1,887 - +0.1

Or see this region's nucleotide sequence