Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02988 and MPMX26_02989 are separated by 130 nucleotides MPMX26_02989 and MPMX26_02990 are separated by 72 nucleotides MPMX26_02990 and MPMX26_02991 are separated by 46 nucleotides
MPMX26_02988: MPMX26_02988 - Aldose sugar dehydrogenase YliI, at 3,106,116 to 3,107,288
_02988
MPMX26_02989: MPMX26_02989 - HTH-type transcriptional regulator CueR, at 3,107,419 to 3,107,823
_02989
MPMX26_02990: MPMX26_02990 - hypothetical protein, at 3,107,896 to 3,108,513
_02990
MPMX26_02991: MPMX26_02991 - hypothetical protein, at 3,108,560 to 3,109,012
_02991
Position (kb)
3107
3108 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3106.511 kb on - strand, within MPMX26_02988 at 3106.617 kb on - strand, within MPMX26_02988 at 3106.619 kb on - strand, within MPMX26_02988 at 3106.622 kb on - strand, within MPMX26_02988 at 3106.670 kb on - strand, within MPMX26_02988 at 3106.721 kb on + strand, within MPMX26_02988 at 3106.729 kb on - strand, within MPMX26_02988 at 3106.729 kb on - strand, within MPMX26_02988 at 3106.740 kb on - strand, within MPMX26_02988 at 3106.787 kb on - strand, within MPMX26_02988 at 3106.838 kb on + strand, within MPMX26_02988 at 3106.848 kb on + strand, within MPMX26_02988 at 3106.851 kb on - strand, within MPMX26_02988 at 3106.851 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.884 kb on - strand, within MPMX26_02988 at 3106.887 kb on - strand, within MPMX26_02988 at 3106.979 kb on - strand, within MPMX26_02988 at 3106.998 kb on - strand, within MPMX26_02988 at 3107.049 kb on - strand, within MPMX26_02988 at 3107.197 kb on + strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.229 kb on + strand at 3107.431 kb on - strand at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.493 kb on - strand, within MPMX26_02989 at 3107.562 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.665 kb on - strand, within MPMX26_02989 at 3107.680 kb on - strand, within MPMX26_02989 at 3107.818 kb on - strand at 3107.850 kb on + strand at 3107.907 kb on + strand at 3107.953 kb on + strand at 3107.958 kb on + strand, within MPMX26_02990 at 3108.038 kb on + strand, within MPMX26_02990 at 3108.101 kb on + strand, within MPMX26_02990 at 3108.106 kb on + strand, within MPMX26_02990 at 3108.172 kb on + strand, within MPMX26_02990 at 3108.186 kb on + strand, within MPMX26_02990 at 3108.186 kb on + strand, within MPMX26_02990 at 3108.192 kb on + strand, within MPMX26_02990 at 3108.192 kb on + strand, within MPMX26_02990 at 3108.194 kb on + strand, within MPMX26_02990 at 3108.200 kb on - strand, within MPMX26_02990 at 3108.274 kb on + strand, within MPMX26_02990 at 3108.274 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.320 kb on + strand, within MPMX26_02990 at 3108.330 kb on + strand, within MPMX26_02990 at 3108.351 kb on + strand, within MPMX26_02990 at 3108.387 kb on + strand, within MPMX26_02990 at 3108.397 kb on + strand, within MPMX26_02990 at 3108.397 kb on + strand, within MPMX26_02990 at 3108.397 kb on + strand, within MPMX26_02990 at 3108.402 kb on + strand, within MPMX26_02990 at 3108.402 kb on + strand, within MPMX26_02990 at 3108.402 kb on + strand, within MPMX26_02990 at 3108.412 kb on + strand, within MPMX26_02990 at 3108.452 kb on + strand at 3108.452 kb on + strand at 3108.459 kb on + strand at 3108.492 kb on + strand at 3108.504 kb on + strand at 3108.518 kb on + strand at 3108.526 kb on - strand at 3108.562 kb on + strand at 3108.570 kb on - strand at 3108.585 kb on - strand at 3108.589 kb on - strand at 3108.716 kb on - strand, within MPMX26_02991 at 3108.732 kb on - strand, within MPMX26_02991 at 3108.737 kb on - strand, within MPMX26_02991 at 3108.742 kb on - strand, within MPMX26_02991 at 3108.742 kb on - strand, within MPMX26_02991 at 3108.742 kb on - strand, within MPMX26_02991 at 3108.742 kb on - strand, within MPMX26_02991 at 3108.742 kb on - strand, within MPMX26_02991 at 3108.784 kb on - strand, within MPMX26_02991 at 3108.786 kb on - strand, within MPMX26_02991 at 3108.786 kb on - strand, within MPMX26_02991 at 3108.786 kb on - strand, within MPMX26_02991 at 3108.788 kb on + strand, within MPMX26_02991 at 3108.796 kb on - strand, within MPMX26_02991 at 3108.796 kb on - strand, within MPMX26_02991 at 3108.796 kb on - strand, within MPMX26_02991 at 3108.802 kb on - strand, within MPMX26_02991 at 3108.812 kb on + strand, within MPMX26_02991 at 3108.820 kb on - strand, within MPMX26_02991 at 3108.820 kb on - strand, within MPMX26_02991
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,106,511 - MPMX26_02988 0.34 -1.2 3,106,617 - MPMX26_02988 0.43 +0.0 3,106,619 - MPMX26_02988 0.43 -0.3 3,106,622 - MPMX26_02988 0.43 -1.1 3,106,670 - MPMX26_02988 0.47 -3.0 3,106,721 + MPMX26_02988 0.52 -1.3 3,106,729 - MPMX26_02988 0.52 +0.8 3,106,729 - MPMX26_02988 0.52 +1.9 3,106,740 - MPMX26_02988 0.53 -0.7 3,106,787 - MPMX26_02988 0.57 -0.2 3,106,838 + MPMX26_02988 0.62 -0.8 3,106,848 + MPMX26_02988 0.62 +1.5 3,106,851 - MPMX26_02988 0.63 +1.7 3,106,851 - MPMX26_02988 0.63 +1.2 3,106,856 - MPMX26_02988 0.63 +0.2 3,106,856 - MPMX26_02988 0.63 -0.6 3,106,856 - MPMX26_02988 0.63 +1.8 3,106,856 - MPMX26_02988 0.63 -2.2 3,106,856 - MPMX26_02988 0.63 -0.3 3,106,856 - MPMX26_02988 0.63 +0.0 3,106,856 - MPMX26_02988 0.63 -1.2 3,106,856 - MPMX26_02988 0.63 +0.8 3,106,856 - MPMX26_02988 0.63 -0.3 3,106,856 - MPMX26_02988 0.63 -1.3 3,106,856 - MPMX26_02988 0.63 -1.0 3,106,856 - MPMX26_02988 0.63 -0.8 3,106,884 - MPMX26_02988 0.65 +0.7 3,106,887 - MPMX26_02988 0.66 -0.1 3,106,979 - MPMX26_02988 0.74 +0.7 3,106,998 - MPMX26_02988 0.75 -1.0 3,107,049 - MPMX26_02988 0.80 -2.4 3,107,197 + +0.6 3,107,205 - +0.0 3,107,205 - +0.2 3,107,205 - +1.3 3,107,205 - +0.7 3,107,229 + +1.0 3,107,431 - -1.1 3,107,466 - MPMX26_02989 0.12 +0.7 3,107,466 - MPMX26_02989 0.12 -0.8 3,107,466 - MPMX26_02989 0.12 +0.2 3,107,466 - MPMX26_02989 0.12 +0.2 3,107,493 - MPMX26_02989 0.18 +0.4 3,107,562 - MPMX26_02989 0.35 -2.0 3,107,590 - MPMX26_02989 0.42 +0.9 3,107,590 - MPMX26_02989 0.42 +0.2 3,107,590 - MPMX26_02989 0.42 +0.0 3,107,590 - MPMX26_02989 0.42 +0.8 3,107,665 - MPMX26_02989 0.61 -0.0 3,107,680 - MPMX26_02989 0.64 -0.2 3,107,818 - +0.4 3,107,850 + -2.4 3,107,907 + +0.7 3,107,953 + +0.9 3,107,958 + MPMX26_02990 0.10 +1.7 3,108,038 + MPMX26_02990 0.23 -0.1 3,108,101 + MPMX26_02990 0.33 +0.4 3,108,106 + MPMX26_02990 0.34 +0.8 3,108,172 + MPMX26_02990 0.45 +0.2 3,108,186 + MPMX26_02990 0.47 +0.3 3,108,186 + MPMX26_02990 0.47 +0.5 3,108,192 + MPMX26_02990 0.48 +0.2 3,108,192 + MPMX26_02990 0.48 -0.4 3,108,194 + MPMX26_02990 0.48 -1.1 3,108,200 - MPMX26_02990 0.49 -1.1 3,108,274 + MPMX26_02990 0.61 +0.9 3,108,274 + MPMX26_02990 0.61 -0.1 3,108,320 + MPMX26_02990 0.69 +0.5 3,108,320 + MPMX26_02990 0.69 -1.7 3,108,320 + MPMX26_02990 0.69 +0.0 3,108,320 + MPMX26_02990 0.69 -0.2 3,108,320 + MPMX26_02990 0.69 +1.3 3,108,320 + MPMX26_02990 0.69 -0.4 3,108,320 + MPMX26_02990 0.69 -0.7 3,108,330 + MPMX26_02990 0.70 +0.6 3,108,351 + MPMX26_02990 0.74 -0.0 3,108,387 + MPMX26_02990 0.79 -1.8 3,108,397 + MPMX26_02990 0.81 +0.6 3,108,397 + MPMX26_02990 0.81 -0.8 3,108,397 + MPMX26_02990 0.81 -2.4 3,108,402 + MPMX26_02990 0.82 +0.0 3,108,402 + MPMX26_02990 0.82 +0.2 3,108,402 + MPMX26_02990 0.82 +0.1 3,108,412 + MPMX26_02990 0.83 -2.8 3,108,452 + -2.0 3,108,452 + +1.1 3,108,459 + -2.2 3,108,492 + -0.5 3,108,504 + +0.1 3,108,518 + -1.0 3,108,526 - -1.0 3,108,562 + -0.8 3,108,570 - -0.7 3,108,585 - +0.2 3,108,589 - -1.6 3,108,716 - MPMX26_02991 0.34 -0.3 3,108,732 - MPMX26_02991 0.38 -0.7 3,108,737 - MPMX26_02991 0.39 +1.0 3,108,742 - MPMX26_02991 0.40 -1.1 3,108,742 - MPMX26_02991 0.40 -0.3 3,108,742 - MPMX26_02991 0.40 -2.5 3,108,742 - MPMX26_02991 0.40 -1.3 3,108,742 - MPMX26_02991 0.40 +0.2 3,108,784 - MPMX26_02991 0.49 +0.7 3,108,786 - MPMX26_02991 0.50 -1.6 3,108,786 - MPMX26_02991 0.50 -0.4 3,108,786 - MPMX26_02991 0.50 +0.1 3,108,788 + MPMX26_02991 0.50 +1.4 3,108,796 - MPMX26_02991 0.52 +0.6 3,108,796 - MPMX26_02991 0.52 -0.4 3,108,796 - MPMX26_02991 0.52 -0.3 3,108,802 - MPMX26_02991 0.53 +0.4 3,108,812 + MPMX26_02991 0.56 +1.3 3,108,820 - MPMX26_02991 0.57 -0.7 3,108,820 - MPMX26_02991 0.57 +0.0
Or see this region's nucleotide sequence