Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02989

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02988 and MPMX26_02989 are separated by 130 nucleotidesMPMX26_02989 and MPMX26_02990 are separated by 72 nucleotidesMPMX26_02990 and MPMX26_02991 are separated by 46 nucleotides MPMX26_02988: MPMX26_02988 - Aldose sugar dehydrogenase YliI, at 3,106,116 to 3,107,288 _02988 MPMX26_02989: MPMX26_02989 - HTH-type transcriptional regulator CueR, at 3,107,419 to 3,107,823 _02989 MPMX26_02990: MPMX26_02990 - hypothetical protein, at 3,107,896 to 3,108,513 _02990 MPMX26_02991: MPMX26_02991 - hypothetical protein, at 3,108,560 to 3,109,012 _02991 Position (kb) 3107 3108Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3106.511 kb on - strand, within MPMX26_02988at 3106.617 kb on - strand, within MPMX26_02988at 3106.619 kb on - strand, within MPMX26_02988at 3106.622 kb on - strand, within MPMX26_02988at 3106.670 kb on - strand, within MPMX26_02988at 3106.721 kb on + strand, within MPMX26_02988at 3106.729 kb on - strand, within MPMX26_02988at 3106.729 kb on - strand, within MPMX26_02988at 3106.740 kb on - strand, within MPMX26_02988at 3106.787 kb on - strand, within MPMX26_02988at 3106.838 kb on + strand, within MPMX26_02988at 3106.848 kb on + strand, within MPMX26_02988at 3106.851 kb on - strand, within MPMX26_02988at 3106.851 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.884 kb on - strand, within MPMX26_02988at 3106.887 kb on - strand, within MPMX26_02988at 3106.979 kb on - strand, within MPMX26_02988at 3106.998 kb on - strand, within MPMX26_02988at 3107.049 kb on - strand, within MPMX26_02988at 3107.197 kb on + strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.229 kb on + strandat 3107.431 kb on - strandat 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.493 kb on - strand, within MPMX26_02989at 3107.562 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.665 kb on - strand, within MPMX26_02989at 3107.680 kb on - strand, within MPMX26_02989at 3107.818 kb on - strandat 3107.850 kb on + strandat 3107.907 kb on + strandat 3107.953 kb on + strandat 3107.958 kb on + strand, within MPMX26_02990at 3108.038 kb on + strand, within MPMX26_02990at 3108.101 kb on + strand, within MPMX26_02990at 3108.106 kb on + strand, within MPMX26_02990at 3108.172 kb on + strand, within MPMX26_02990at 3108.186 kb on + strand, within MPMX26_02990at 3108.186 kb on + strand, within MPMX26_02990at 3108.192 kb on + strand, within MPMX26_02990at 3108.192 kb on + strand, within MPMX26_02990at 3108.194 kb on + strand, within MPMX26_02990at 3108.200 kb on - strand, within MPMX26_02990at 3108.274 kb on + strand, within MPMX26_02990at 3108.274 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.320 kb on + strand, within MPMX26_02990at 3108.330 kb on + strand, within MPMX26_02990at 3108.351 kb on + strand, within MPMX26_02990at 3108.387 kb on + strand, within MPMX26_02990at 3108.397 kb on + strand, within MPMX26_02990at 3108.397 kb on + strand, within MPMX26_02990at 3108.397 kb on + strand, within MPMX26_02990at 3108.402 kb on + strand, within MPMX26_02990at 3108.402 kb on + strand, within MPMX26_02990at 3108.402 kb on + strand, within MPMX26_02990at 3108.412 kb on + strand, within MPMX26_02990at 3108.452 kb on + strandat 3108.452 kb on + strandat 3108.459 kb on + strandat 3108.492 kb on + strandat 3108.504 kb on + strandat 3108.518 kb on + strandat 3108.526 kb on - strandat 3108.562 kb on + strandat 3108.570 kb on - strandat 3108.585 kb on - strandat 3108.589 kb on - strandat 3108.716 kb on - strand, within MPMX26_02991at 3108.732 kb on - strand, within MPMX26_02991at 3108.737 kb on - strand, within MPMX26_02991at 3108.742 kb on - strand, within MPMX26_02991at 3108.742 kb on - strand, within MPMX26_02991at 3108.742 kb on - strand, within MPMX26_02991at 3108.742 kb on - strand, within MPMX26_02991at 3108.742 kb on - strand, within MPMX26_02991at 3108.784 kb on - strand, within MPMX26_02991at 3108.786 kb on - strand, within MPMX26_02991at 3108.786 kb on - strand, within MPMX26_02991at 3108.786 kb on - strand, within MPMX26_02991at 3108.788 kb on + strand, within MPMX26_02991at 3108.796 kb on - strand, within MPMX26_02991at 3108.796 kb on - strand, within MPMX26_02991at 3108.796 kb on - strand, within MPMX26_02991at 3108.802 kb on - strand, within MPMX26_02991at 3108.812 kb on + strand, within MPMX26_02991at 3108.820 kb on - strand, within MPMX26_02991at 3108.820 kb on - strand, within MPMX26_02991

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,106,511 - MPMX26_02988 0.34 -1.2
3,106,617 - MPMX26_02988 0.43 +0.0
3,106,619 - MPMX26_02988 0.43 -0.3
3,106,622 - MPMX26_02988 0.43 -1.1
3,106,670 - MPMX26_02988 0.47 -3.0
3,106,721 + MPMX26_02988 0.52 -1.3
3,106,729 - MPMX26_02988 0.52 +0.8
3,106,729 - MPMX26_02988 0.52 +1.9
3,106,740 - MPMX26_02988 0.53 -0.7
3,106,787 - MPMX26_02988 0.57 -0.2
3,106,838 + MPMX26_02988 0.62 -0.8
3,106,848 + MPMX26_02988 0.62 +1.5
3,106,851 - MPMX26_02988 0.63 +1.7
3,106,851 - MPMX26_02988 0.63 +1.2
3,106,856 - MPMX26_02988 0.63 +0.2
3,106,856 - MPMX26_02988 0.63 -0.6
3,106,856 - MPMX26_02988 0.63 +1.8
3,106,856 - MPMX26_02988 0.63 -2.2
3,106,856 - MPMX26_02988 0.63 -0.3
3,106,856 - MPMX26_02988 0.63 +0.0
3,106,856 - MPMX26_02988 0.63 -1.2
3,106,856 - MPMX26_02988 0.63 +0.8
3,106,856 - MPMX26_02988 0.63 -0.3
3,106,856 - MPMX26_02988 0.63 -1.3
3,106,856 - MPMX26_02988 0.63 -1.0
3,106,856 - MPMX26_02988 0.63 -0.8
3,106,884 - MPMX26_02988 0.65 +0.7
3,106,887 - MPMX26_02988 0.66 -0.1
3,106,979 - MPMX26_02988 0.74 +0.7
3,106,998 - MPMX26_02988 0.75 -1.0
3,107,049 - MPMX26_02988 0.80 -2.4
3,107,197 + +0.6
3,107,205 - +0.0
3,107,205 - +0.2
3,107,205 - +1.3
3,107,205 - +0.7
3,107,229 + +1.0
3,107,431 - -1.1
3,107,466 - MPMX26_02989 0.12 +0.7
3,107,466 - MPMX26_02989 0.12 -0.8
3,107,466 - MPMX26_02989 0.12 +0.2
3,107,466 - MPMX26_02989 0.12 +0.2
3,107,493 - MPMX26_02989 0.18 +0.4
3,107,562 - MPMX26_02989 0.35 -2.0
3,107,590 - MPMX26_02989 0.42 +0.9
3,107,590 - MPMX26_02989 0.42 +0.2
3,107,590 - MPMX26_02989 0.42 +0.0
3,107,590 - MPMX26_02989 0.42 +0.8
3,107,665 - MPMX26_02989 0.61 -0.0
3,107,680 - MPMX26_02989 0.64 -0.2
3,107,818 - +0.4
3,107,850 + -2.4
3,107,907 + +0.7
3,107,953 + +0.9
3,107,958 + MPMX26_02990 0.10 +1.7
3,108,038 + MPMX26_02990 0.23 -0.1
3,108,101 + MPMX26_02990 0.33 +0.4
3,108,106 + MPMX26_02990 0.34 +0.8
3,108,172 + MPMX26_02990 0.45 +0.2
3,108,186 + MPMX26_02990 0.47 +0.3
3,108,186 + MPMX26_02990 0.47 +0.5
3,108,192 + MPMX26_02990 0.48 +0.2
3,108,192 + MPMX26_02990 0.48 -0.4
3,108,194 + MPMX26_02990 0.48 -1.1
3,108,200 - MPMX26_02990 0.49 -1.1
3,108,274 + MPMX26_02990 0.61 +0.9
3,108,274 + MPMX26_02990 0.61 -0.1
3,108,320 + MPMX26_02990 0.69 +0.5
3,108,320 + MPMX26_02990 0.69 -1.7
3,108,320 + MPMX26_02990 0.69 +0.0
3,108,320 + MPMX26_02990 0.69 -0.2
3,108,320 + MPMX26_02990 0.69 +1.3
3,108,320 + MPMX26_02990 0.69 -0.4
3,108,320 + MPMX26_02990 0.69 -0.7
3,108,330 + MPMX26_02990 0.70 +0.6
3,108,351 + MPMX26_02990 0.74 -0.0
3,108,387 + MPMX26_02990 0.79 -1.8
3,108,397 + MPMX26_02990 0.81 +0.6
3,108,397 + MPMX26_02990 0.81 -0.8
3,108,397 + MPMX26_02990 0.81 -2.4
3,108,402 + MPMX26_02990 0.82 +0.0
3,108,402 + MPMX26_02990 0.82 +0.2
3,108,402 + MPMX26_02990 0.82 +0.1
3,108,412 + MPMX26_02990 0.83 -2.8
3,108,452 + -2.0
3,108,452 + +1.1
3,108,459 + -2.2
3,108,492 + -0.5
3,108,504 + +0.1
3,108,518 + -1.0
3,108,526 - -1.0
3,108,562 + -0.8
3,108,570 - -0.7
3,108,585 - +0.2
3,108,589 - -1.6
3,108,716 - MPMX26_02991 0.34 -0.3
3,108,732 - MPMX26_02991 0.38 -0.7
3,108,737 - MPMX26_02991 0.39 +1.0
3,108,742 - MPMX26_02991 0.40 -1.1
3,108,742 - MPMX26_02991 0.40 -0.3
3,108,742 - MPMX26_02991 0.40 -2.5
3,108,742 - MPMX26_02991 0.40 -1.3
3,108,742 - MPMX26_02991 0.40 +0.2
3,108,784 - MPMX26_02991 0.49 +0.7
3,108,786 - MPMX26_02991 0.50 -1.6
3,108,786 - MPMX26_02991 0.50 -0.4
3,108,786 - MPMX26_02991 0.50 +0.1
3,108,788 + MPMX26_02991 0.50 +1.4
3,108,796 - MPMX26_02991 0.52 +0.6
3,108,796 - MPMX26_02991 0.52 -0.4
3,108,796 - MPMX26_02991 0.52 -0.3
3,108,802 - MPMX26_02991 0.53 +0.4
3,108,812 + MPMX26_02991 0.56 +1.3
3,108,820 - MPMX26_02991 0.57 -0.7
3,108,820 - MPMX26_02991 0.57 +0.0

Or see this region's nucleotide sequence