Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02848

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02846 and MPMX26_02847 are separated by 168 nucleotidesMPMX26_02847 and MPMX26_02848 are separated by 73 nucleotidesMPMX26_02848 and MPMX26_02849 are separated by 422 nucleotides MPMX26_02846: MPMX26_02846 - Imidazole glycerol phosphate synthase subunit HisH, at 2,937,790 to 2,938,407 _02846 MPMX26_02847: MPMX26_02847 - hypothetical protein, at 2,938,576 to 2,939,109 _02847 MPMX26_02848: MPMX26_02848 - Ribonuclease D, at 2,939,183 to 2,939,839 _02848 MPMX26_02849: MPMX26_02849 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,940,262 to 2,941,002 _02849 Position (kb) 2939 2940Strain fitness (log2 ratio) -3 -2 -1 0 1at 2938.204 kb on + strand, within MPMX26_02846at 2938.204 kb on + strand, within MPMX26_02846at 2938.209 kb on + strand, within MPMX26_02846at 2938.209 kb on + strand, within MPMX26_02846at 2938.209 kb on + strand, within MPMX26_02846at 2938.249 kb on + strand, within MPMX26_02846at 2938.249 kb on + strand, within MPMX26_02846at 2938.249 kb on + strand, within MPMX26_02846at 2938.249 kb on + strand, within MPMX26_02846at 2938.249 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.256 kb on + strand, within MPMX26_02846at 2938.257 kb on + strand, within MPMX26_02846at 2938.296 kb on + strand, within MPMX26_02846at 2938.299 kb on + strand, within MPMX26_02846at 2938.299 kb on + strand, within MPMX26_02846at 2938.299 kb on + strand, within MPMX26_02846at 2938.299 kb on + strand, within MPMX26_02846at 2938.299 kb on + strand, within MPMX26_02846at 2938.401 kb on + strandat 2938.412 kb on + strandat 2938.420 kb on + strandat 2938.427 kb on + strandat 2938.475 kb on - strandat 2938.525 kb on + strandat 2938.618 kb on + strandat 2938.722 kb on + strand, within MPMX26_02847at 2938.732 kb on + strand, within MPMX26_02847at 2938.740 kb on - strand, within MPMX26_02847at 2938.746 kb on + strand, within MPMX26_02847at 2938.752 kb on + strand, within MPMX26_02847at 2938.782 kb on + strand, within MPMX26_02847at 2938.782 kb on + strand, within MPMX26_02847at 2938.981 kb on + strand, within MPMX26_02847at 2938.981 kb on + strand, within MPMX26_02847at 2938.981 kb on + strand, within MPMX26_02847at 2938.981 kb on + strand, within MPMX26_02847at 2938.981 kb on + strand, within MPMX26_02847at 2939.061 kb on + strandat 2939.082 kb on + strandat 2939.082 kb on + strandat 2939.089 kb on + strandat 2939.099 kb on + strandat 2939.099 kb on + strandat 2939.112 kb on + strandat 2939.112 kb on + strandat 2939.413 kb on - strand, within MPMX26_02848at 2939.415 kb on + strand, within MPMX26_02848at 2939.755 kb on - strand, within MPMX26_02848at 2939.834 kb on - strandat 2939.834 kb on - strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.308 kb on + strandat 2940.313 kb on + strandat 2940.325 kb on + strandat 2940.362 kb on + strand, within MPMX26_02849at 2940.362 kb on + strand, within MPMX26_02849at 2940.362 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.372 kb on + strand, within MPMX26_02849at 2940.398 kb on + strand, within MPMX26_02849at 2940.433 kb on + strand, within MPMX26_02849at 2940.433 kb on + strand, within MPMX26_02849at 2940.451 kb on + strand, within MPMX26_02849at 2940.457 kb on + strand, within MPMX26_02849at 2940.479 kb on + strand, within MPMX26_02849at 2940.484 kb on + strand, within MPMX26_02849at 2940.493 kb on + strand, within MPMX26_02849at 2940.510 kb on + strand, within MPMX26_02849at 2940.573 kb on + strand, within MPMX26_02849at 2940.662 kb on + strand, within MPMX26_02849at 2940.673 kb on + strand, within MPMX26_02849at 2940.673 kb on + strand, within MPMX26_02849at 2940.673 kb on + strand, within MPMX26_02849at 2940.712 kb on + strand, within MPMX26_02849at 2940.712 kb on + strand, within MPMX26_02849at 2940.739 kb on + strand, within MPMX26_02849at 2940.742 kb on + strand, within MPMX26_02849at 2940.744 kb on + strand, within MPMX26_02849at 2940.744 kb on + strand, within MPMX26_02849at 2940.744 kb on + strand, within MPMX26_02849at 2940.749 kb on + strand, within MPMX26_02849at 2940.749 kb on + strand, within MPMX26_02849at 2940.797 kb on + strand, within MPMX26_02849at 2940.807 kb on + strand, within MPMX26_02849at 2940.809 kb on + strand, within MPMX26_02849at 2940.809 kb on + strand, within MPMX26_02849at 2940.809 kb on + strand, within MPMX26_02849at 2940.809 kb on + strand, within MPMX26_02849at 2940.820 kb on + strand, within MPMX26_02849at 2940.825 kb on + strand, within MPMX26_02849at 2940.825 kb on + strand, within MPMX26_02849

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,938,204 + MPMX26_02846 0.67 -0.5
2,938,204 + MPMX26_02846 0.67 -1.0
2,938,209 + MPMX26_02846 0.68 -0.3
2,938,209 + MPMX26_02846 0.68 -1.2
2,938,209 + MPMX26_02846 0.68 +0.4
2,938,249 + MPMX26_02846 0.74 -0.8
2,938,249 + MPMX26_02846 0.74 -0.2
2,938,249 + MPMX26_02846 0.74 +0.5
2,938,249 + MPMX26_02846 0.74 +0.9
2,938,249 + MPMX26_02846 0.74 -0.1
2,938,256 + MPMX26_02846 0.75 -1.1
2,938,256 + MPMX26_02846 0.75 +1.4
2,938,256 + MPMX26_02846 0.75 -0.9
2,938,256 + MPMX26_02846 0.75 -1.0
2,938,256 + MPMX26_02846 0.75 -0.0
2,938,256 + MPMX26_02846 0.75 -2.7
2,938,256 + MPMX26_02846 0.75 -2.3
2,938,256 + MPMX26_02846 0.75 -3.5
2,938,256 + MPMX26_02846 0.75 -0.1
2,938,256 + MPMX26_02846 0.75 -0.5
2,938,256 + MPMX26_02846 0.75 -0.5
2,938,256 + MPMX26_02846 0.75 -2.0
2,938,256 + MPMX26_02846 0.75 -0.3
2,938,257 + MPMX26_02846 0.76 +0.4
2,938,296 + MPMX26_02846 0.82 -1.1
2,938,299 + MPMX26_02846 0.82 -1.4
2,938,299 + MPMX26_02846 0.82 -0.6
2,938,299 + MPMX26_02846 0.82 -1.9
2,938,299 + MPMX26_02846 0.82 -0.2
2,938,299 + MPMX26_02846 0.82 -0.4
2,938,401 + -0.4
2,938,412 + -0.1
2,938,420 + -1.2
2,938,427 + -0.1
2,938,475 - +0.7
2,938,525 + +0.5
2,938,618 + +0.7
2,938,722 + MPMX26_02847 0.27 +0.9
2,938,732 + MPMX26_02847 0.29 -0.4
2,938,740 - MPMX26_02847 0.31 +0.6
2,938,746 + MPMX26_02847 0.32 -0.5
2,938,752 + MPMX26_02847 0.33 +1.2
2,938,782 + MPMX26_02847 0.39 -0.6
2,938,782 + MPMX26_02847 0.39 +0.1
2,938,981 + MPMX26_02847 0.76 +0.8
2,938,981 + MPMX26_02847 0.76 +0.2
2,938,981 + MPMX26_02847 0.76 -1.2
2,938,981 + MPMX26_02847 0.76 -0.4
2,938,981 + MPMX26_02847 0.76 +0.5
2,939,061 + -1.9
2,939,082 + -1.7
2,939,082 + -0.2
2,939,089 + +0.4
2,939,099 + +0.5
2,939,099 + -1.6
2,939,112 + -0.2
2,939,112 + -0.7
2,939,413 - MPMX26_02848 0.35 -0.2
2,939,415 + MPMX26_02848 0.35 +0.4
2,939,755 - MPMX26_02848 0.87 +1.4
2,939,834 - -0.6
2,939,834 - -0.2
2,940,308 + -0.6
2,940,308 + -1.1
2,940,308 + -1.6
2,940,308 + +1.2
2,940,308 + -1.3
2,940,308 + -1.3
2,940,308 + -0.1
2,940,313 + -1.8
2,940,325 + -2.2
2,940,362 + MPMX26_02849 0.13 -3.1
2,940,362 + MPMX26_02849 0.13 +0.2
2,940,362 + MPMX26_02849 0.13 +0.2
2,940,372 + MPMX26_02849 0.15 -0.7
2,940,372 + MPMX26_02849 0.15 -1.6
2,940,372 + MPMX26_02849 0.15 -3.5
2,940,372 + MPMX26_02849 0.15 +0.4
2,940,372 + MPMX26_02849 0.15 +0.0
2,940,372 + MPMX26_02849 0.15 -1.9
2,940,372 + MPMX26_02849 0.15 -1.2
2,940,398 + MPMX26_02849 0.18 -1.0
2,940,433 + MPMX26_02849 0.23 -1.0
2,940,433 + MPMX26_02849 0.23 -0.6
2,940,451 + MPMX26_02849 0.26 -0.1
2,940,457 + MPMX26_02849 0.26 -0.3
2,940,479 + MPMX26_02849 0.29 +0.4
2,940,484 + MPMX26_02849 0.30 -0.6
2,940,493 + MPMX26_02849 0.31 -1.9
2,940,510 + MPMX26_02849 0.33 -1.4
2,940,573 + MPMX26_02849 0.42 +0.5
2,940,662 + MPMX26_02849 0.54 -0.4
2,940,673 + MPMX26_02849 0.55 -1.5
2,940,673 + MPMX26_02849 0.55 -0.4
2,940,673 + MPMX26_02849 0.55 -0.0
2,940,712 + MPMX26_02849 0.61 +0.5
2,940,712 + MPMX26_02849 0.61 -0.2
2,940,739 + MPMX26_02849 0.64 -0.2
2,940,742 + MPMX26_02849 0.65 -2.0
2,940,744 + MPMX26_02849 0.65 -1.8
2,940,744 + MPMX26_02849 0.65 +0.2
2,940,744 + MPMX26_02849 0.65 -0.1
2,940,749 + MPMX26_02849 0.66 -1.0
2,940,749 + MPMX26_02849 0.66 -0.6
2,940,797 + MPMX26_02849 0.72 -0.1
2,940,807 + MPMX26_02849 0.74 -0.4
2,940,809 + MPMX26_02849 0.74 -2.0
2,940,809 + MPMX26_02849 0.74 -0.6
2,940,809 + MPMX26_02849 0.74 -1.9
2,940,809 + MPMX26_02849 0.74 +0.6
2,940,820 + MPMX26_02849 0.75 +0.2
2,940,825 + MPMX26_02849 0.76 +0.3
2,940,825 + MPMX26_02849 0.76 +0.1

Or see this region's nucleotide sequence