Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02460

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02459 and MPMX26_02460 are separated by 270 nucleotidesMPMX26_02460 and MPMX26_02461 are separated by 63 nucleotides MPMX26_02459: MPMX26_02459 - Inner membrane protein YbjJ, at 2,541,802 to 2,543,001 _02459 MPMX26_02460: MPMX26_02460 - DNA ligase, at 2,543,272 to 2,545,320 _02460 MPMX26_02461: MPMX26_02461 - Cell division protein ZipA, at 2,545,384 to 2,546,394 _02461 Position (kb) 2543 2544 2545 2546Strain fitness (log2 ratio) -2 -1 0 1 2at 2542.287 kb on - strand, within MPMX26_02459at 2542.287 kb on - strand, within MPMX26_02459at 2542.287 kb on - strand, within MPMX26_02459at 2542.491 kb on - strand, within MPMX26_02459at 2542.533 kb on - strand, within MPMX26_02459at 2542.597 kb on - strand, within MPMX26_02459at 2542.597 kb on - strand, within MPMX26_02459at 2542.698 kb on - strand, within MPMX26_02459at 2542.698 kb on - strand, within MPMX26_02459at 2542.698 kb on - strand, within MPMX26_02459at 2542.734 kb on - strand, within MPMX26_02459at 2542.792 kb on - strand, within MPMX26_02459at 2542.815 kb on - strand, within MPMX26_02459at 2542.822 kb on - strand, within MPMX26_02459at 2542.825 kb on - strand, within MPMX26_02459at 2542.869 kb on + strand, within MPMX26_02459at 2542.962 kb on - strandat 2542.962 kb on - strandat 2543.136 kb on - strandat 2543.188 kb on + strandat 2543.204 kb on - strandat 2545.344 kb on - strandat 2545.344 kb on - strandat 2545.344 kb on - strandat 2545.350 kb on - strandat 2545.397 kb on - strandat 2545.401 kb on - strandat 2545.425 kb on - strandat 2545.435 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,542,287 - MPMX26_02459 0.40 +0.3
2,542,287 - MPMX26_02459 0.40 -1.0
2,542,287 - MPMX26_02459 0.40 +0.4
2,542,491 - MPMX26_02459 0.57 +0.5
2,542,533 - MPMX26_02459 0.61 -1.6
2,542,597 - MPMX26_02459 0.66 -0.5
2,542,597 - MPMX26_02459 0.66 +1.8
2,542,698 - MPMX26_02459 0.75 +1.0
2,542,698 - MPMX26_02459 0.75 +0.3
2,542,698 - MPMX26_02459 0.75 +0.6
2,542,734 - MPMX26_02459 0.78 -0.3
2,542,792 - MPMX26_02459 0.82 +0.1
2,542,815 - MPMX26_02459 0.84 +0.2
2,542,822 - MPMX26_02459 0.85 +0.4
2,542,825 - MPMX26_02459 0.85 +1.8
2,542,869 + MPMX26_02459 0.89 -0.8
2,542,962 - +1.5
2,542,962 - -1.9
2,543,136 - -1.2
2,543,188 + -1.6
2,543,204 - +0.4
2,545,344 - -0.5
2,545,344 - +0.5
2,545,344 - -1.0
2,545,350 - +0.4
2,545,397 - +0.3
2,545,401 - -0.1
2,545,425 - +1.8
2,545,435 - +0.7

Or see this region's nucleotide sequence