Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02336

Experiment: D-Glucose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02335 and MPMX26_02336 are separated by 108 nucleotidesMPMX26_02336 and MPMX26_02337 are separated by 78 nucleotidesMPMX26_02337 and MPMX26_02338 are separated by 27 nucleotides MPMX26_02335: MPMX26_02335 - Polyphosphate kinase, at 2,408,874 to 2,410,952 _02335 MPMX26_02336: MPMX26_02336 - Biosynthetic peptidoglycan transglycosylase, at 2,411,061 to 2,411,735 _02336 MPMX26_02337: MPMX26_02337 - Rhomboid protease AarA, at 2,411,814 to 2,412,620 _02337 MPMX26_02338: MPMX26_02338 - hypothetical protein, at 2,412,648 to 2,415,128 _02338 Position (kb) 2411 2412Strain fitness (log2 ratio) -3 -2 -1 0 1at 2410.081 kb on - strand, within MPMX26_02335at 2410.124 kb on - strand, within MPMX26_02335at 2410.154 kb on - strand, within MPMX26_02335at 2410.178 kb on - strand, within MPMX26_02335at 2410.182 kb on - strand, within MPMX26_02335at 2410.188 kb on - strand, within MPMX26_02335at 2410.188 kb on - strand, within MPMX26_02335at 2410.193 kb on - strand, within MPMX26_02335at 2410.203 kb on - strand, within MPMX26_02335at 2410.209 kb on - strand, within MPMX26_02335at 2410.247 kb on - strand, within MPMX26_02335at 2410.269 kb on - strand, within MPMX26_02335at 2410.275 kb on - strand, within MPMX26_02335at 2410.280 kb on - strand, within MPMX26_02335at 2410.280 kb on - strand, within MPMX26_02335at 2410.316 kb on - strand, within MPMX26_02335at 2410.435 kb on - strand, within MPMX26_02335at 2410.509 kb on - strand, within MPMX26_02335at 2410.509 kb on - strand, within MPMX26_02335at 2410.569 kb on - strand, within MPMX26_02335at 2410.605 kb on - strand, within MPMX26_02335at 2410.661 kb on - strand, within MPMX26_02335at 2410.661 kb on - strand, within MPMX26_02335at 2410.742 kb on - strand, within MPMX26_02335at 2410.824 kb on - strandat 2410.873 kb on - strandat 2410.894 kb on - strandat 2410.913 kb on - strandat 2411.073 kb on - strandat 2411.177 kb on - strand, within MPMX26_02336at 2411.194 kb on - strand, within MPMX26_02336at 2411.194 kb on - strand, within MPMX26_02336at 2411.200 kb on - strand, within MPMX26_02336at 2411.200 kb on - strand, within MPMX26_02336at 2411.226 kb on - strand, within MPMX26_02336at 2411.226 kb on - strand, within MPMX26_02336at 2411.308 kb on - strand, within MPMX26_02336at 2411.316 kb on - strand, within MPMX26_02336at 2411.336 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.348 kb on - strand, within MPMX26_02336at 2411.451 kb on - strand, within MPMX26_02336at 2411.458 kb on - strand, within MPMX26_02336at 2411.458 kb on - strand, within MPMX26_02336at 2411.518 kb on - strand, within MPMX26_02336at 2411.589 kb on - strand, within MPMX26_02336at 2411.633 kb on - strand, within MPMX26_02336at 2411.647 kb on - strand, within MPMX26_02336at 2411.691 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
remove
2,410,081 - MPMX26_02335 0.58 -3.4
2,410,124 - MPMX26_02335 0.60 -0.0
2,410,154 - MPMX26_02335 0.62 -0.6
2,410,178 - MPMX26_02335 0.63 -0.5
2,410,182 - MPMX26_02335 0.63 -1.2
2,410,188 - MPMX26_02335 0.63 -0.5
2,410,188 - MPMX26_02335 0.63 -2.1
2,410,193 - MPMX26_02335 0.63 -1.2
2,410,203 - MPMX26_02335 0.64 -0.2
2,410,209 - MPMX26_02335 0.64 -0.5
2,410,247 - MPMX26_02335 0.66 +0.2
2,410,269 - MPMX26_02335 0.67 +0.2
2,410,275 - MPMX26_02335 0.67 -0.8
2,410,280 - MPMX26_02335 0.68 -0.2
2,410,280 - MPMX26_02335 0.68 -0.4
2,410,316 - MPMX26_02335 0.69 -0.8
2,410,435 - MPMX26_02335 0.75 -0.8
2,410,509 - MPMX26_02335 0.79 -1.1
2,410,509 - MPMX26_02335 0.79 -1.0
2,410,569 - MPMX26_02335 0.82 -0.4
2,410,605 - MPMX26_02335 0.83 -1.1
2,410,661 - MPMX26_02335 0.86 -0.5
2,410,661 - MPMX26_02335 0.86 -1.6
2,410,742 - MPMX26_02335 0.90 -1.7
2,410,824 - -0.5
2,410,873 - -1.7
2,410,894 - -0.6
2,410,913 - -2.7
2,411,073 - +0.1
2,411,177 - MPMX26_02336 0.17 +0.6
2,411,194 - MPMX26_02336 0.20 -0.3
2,411,194 - MPMX26_02336 0.20 -1.3
2,411,200 - MPMX26_02336 0.21 -1.0
2,411,200 - MPMX26_02336 0.21 +0.0
2,411,226 - MPMX26_02336 0.24 -0.2
2,411,226 - MPMX26_02336 0.24 -1.3
2,411,308 - MPMX26_02336 0.37 -2.0
2,411,316 - MPMX26_02336 0.38 +0.4
2,411,336 - MPMX26_02336 0.41 +0.1
2,411,348 - MPMX26_02336 0.43 +0.1
2,411,348 - MPMX26_02336 0.43 -1.4
2,411,348 - MPMX26_02336 0.43 +1.1
2,411,348 - MPMX26_02336 0.43 -0.7
2,411,348 - MPMX26_02336 0.43 -0.2
2,411,348 - MPMX26_02336 0.43 +1.0
2,411,348 - MPMX26_02336 0.43 -1.2
2,411,348 - MPMX26_02336 0.43 -0.3
2,411,348 - MPMX26_02336 0.43 -0.3
2,411,348 - MPMX26_02336 0.43 -0.6
2,411,348 - MPMX26_02336 0.43 +0.3
2,411,348 - MPMX26_02336 0.43 +0.2
2,411,348 - MPMX26_02336 0.43 -0.6
2,411,451 - MPMX26_02336 0.58 -0.3
2,411,458 - MPMX26_02336 0.59 +0.6
2,411,458 - MPMX26_02336 0.59 -0.6
2,411,518 - MPMX26_02336 0.68 -1.1
2,411,589 - MPMX26_02336 0.78 -0.7
2,411,633 - MPMX26_02336 0.85 +0.4
2,411,647 - MPMX26_02336 0.87 +0.6
2,411,691 - +0.2

Or see this region's nucleotide sequence