Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02182

Experiment: D-Glucose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02180 and MPMX26_02181 are separated by 227 nucleotidesMPMX26_02181 and MPMX26_02182 are separated by 118 nucleotidesMPMX26_02182 and MPMX26_02183 are separated by 56 nucleotides MPMX26_02180: MPMX26_02180 - malonic semialdehyde reductase RutE, at 2,233,468 to 2,234,250 _02180 MPMX26_02181: MPMX26_02181 - GTP cyclohydrolase 1 type 2, at 2,234,478 to 2,234,792 _02181 MPMX26_02182: MPMX26_02182 - hypothetical protein, at 2,234,911 to 2,235,762 _02182 MPMX26_02183: MPMX26_02183 - Phosphoribosylformylglycinamidine synthase, at 2,235,819 to 2,239,652 _02183 Position (kb) 2234 2235 2236Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2233.964 kb on + strand, within MPMX26_02180at 2234.013 kb on + strand, within MPMX26_02180at 2234.023 kb on + strand, within MPMX26_02180at 2234.061 kb on + strand, within MPMX26_02180at 2234.061 kb on + strand, within MPMX26_02180at 2234.094 kb on + strand, within MPMX26_02180at 2234.112 kb on + strand, within MPMX26_02180at 2234.184 kb on + strandat 2234.184 kb on + strandat 2234.184 kb on + strandat 2234.194 kb on + strandat 2234.211 kb on + strandat 2234.211 kb on + strandat 2235.717 kb on + strandat 2235.819 kb on - strandat 2235.865 kb on - strandat 2235.865 kb on - strandat 2235.879 kb on - strandat 2235.971 kb on - strandat 2235.993 kb on - strandat 2236.014 kb on - strandat 2236.014 kb on - strandat 2236.034 kb on - strandat 2236.040 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.047 kb on - strandat 2236.062 kb on - strandat 2236.115 kb on - strandat 2236.115 kb on - strandat 2236.115 kb on - strandat 2236.115 kb on - strandat 2236.161 kb on - strandat 2236.163 kb on - strandat 2236.206 kb on - strand, within MPMX26_02183at 2236.230 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.266 kb on - strand, within MPMX26_02183at 2236.371 kb on - strand, within MPMX26_02183at 2236.371 kb on - strand, within MPMX26_02183at 2236.371 kb on - strand, within MPMX26_02183at 2236.371 kb on - strand, within MPMX26_02183at 2236.371 kb on - strand, within MPMX26_02183at 2236.386 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.397 kb on - strand, within MPMX26_02183at 2236.407 kb on - strand, within MPMX26_02183at 2236.407 kb on - strand, within MPMX26_02183at 2236.407 kb on - strand, within MPMX26_02183at 2236.407 kb on - strand, within MPMX26_02183at 2236.407 kb on - strand, within MPMX26_02183at 2236.422 kb on - strand, within MPMX26_02183at 2236.437 kb on - strand, within MPMX26_02183at 2236.442 kb on - strand, within MPMX26_02183at 2236.444 kb on - strand, within MPMX26_02183at 2236.463 kb on - strand, within MPMX26_02183at 2236.463 kb on - strand, within MPMX26_02183at 2236.482 kb on - strand, within MPMX26_02183at 2236.482 kb on - strand, within MPMX26_02183at 2236.494 kb on - strand, within MPMX26_02183at 2236.496 kb on - strand, within MPMX26_02183at 2236.514 kb on - strand, within MPMX26_02183at 2236.560 kb on - strand, within MPMX26_02183at 2236.728 kb on - strand, within MPMX26_02183at 2236.752 kb on - strand, within MPMX26_02183at 2236.752 kb on - strand, within MPMX26_02183at 2236.757 kb on - strand, within MPMX26_02183

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
remove
2,233,964 + MPMX26_02180 0.63 -0.7
2,234,013 + MPMX26_02180 0.70 +0.0
2,234,023 + MPMX26_02180 0.71 +0.3
2,234,061 + MPMX26_02180 0.76 -0.1
2,234,061 + MPMX26_02180 0.76 -0.2
2,234,094 + MPMX26_02180 0.80 +0.1
2,234,112 + MPMX26_02180 0.82 -0.0
2,234,184 + +0.5
2,234,184 + +1.0
2,234,184 + -1.0
2,234,194 + +0.9
2,234,211 + +1.9
2,234,211 + -0.4
2,235,717 + +2.0
2,235,819 - +0.6
2,235,865 - +1.0
2,235,865 - -0.6
2,235,879 - -1.1
2,235,971 - -2.0
2,235,993 - -1.1
2,236,014 - -1.2
2,236,014 - -1.6
2,236,034 - +1.0
2,236,040 - -2.9
2,236,047 - -1.6
2,236,047 - +0.2
2,236,047 - +0.8
2,236,047 - +0.4
2,236,047 - +1.7
2,236,047 - +1.1
2,236,047 - -0.1
2,236,062 - +1.1
2,236,115 - -0.0
2,236,115 - -1.3
2,236,115 - +0.5
2,236,115 - -0.4
2,236,161 - -0.1
2,236,163 - -0.4
2,236,206 - MPMX26_02183 0.10 -0.3
2,236,230 - MPMX26_02183 0.11 -0.8
2,236,266 - MPMX26_02183 0.12 +1.0
2,236,266 - MPMX26_02183 0.12 +0.5
2,236,266 - MPMX26_02183 0.12 -1.1
2,236,266 - MPMX26_02183 0.12 -0.6
2,236,266 - MPMX26_02183 0.12 +1.4
2,236,266 - MPMX26_02183 0.12 +0.6
2,236,371 - MPMX26_02183 0.14 +1.4
2,236,371 - MPMX26_02183 0.14 +0.4
2,236,371 - MPMX26_02183 0.14 -1.1
2,236,371 - MPMX26_02183 0.14 +0.5
2,236,371 - MPMX26_02183 0.14 +1.4
2,236,386 - MPMX26_02183 0.15 +0.1
2,236,397 - MPMX26_02183 0.15 -1.3
2,236,397 - MPMX26_02183 0.15 -1.1
2,236,397 - MPMX26_02183 0.15 -2.1
2,236,397 - MPMX26_02183 0.15 -2.4
2,236,397 - MPMX26_02183 0.15 -0.7
2,236,397 - MPMX26_02183 0.15 +0.8
2,236,397 - MPMX26_02183 0.15 -0.7
2,236,397 - MPMX26_02183 0.15 +0.7
2,236,397 - MPMX26_02183 0.15 -0.3
2,236,397 - MPMX26_02183 0.15 -2.0
2,236,397 - MPMX26_02183 0.15 -1.9
2,236,397 - MPMX26_02183 0.15 +0.6
2,236,397 - MPMX26_02183 0.15 -0.6
2,236,397 - MPMX26_02183 0.15 +0.6
2,236,397 - MPMX26_02183 0.15 +0.3
2,236,397 - MPMX26_02183 0.15 +0.5
2,236,397 - MPMX26_02183 0.15 +0.3
2,236,397 - MPMX26_02183 0.15 +1.2
2,236,397 - MPMX26_02183 0.15 -0.7
2,236,397 - MPMX26_02183 0.15 +0.3
2,236,397 - MPMX26_02183 0.15 +0.4
2,236,397 - MPMX26_02183 0.15 +0.0
2,236,397 - MPMX26_02183 0.15 -0.6
2,236,397 - MPMX26_02183 0.15 -1.5
2,236,397 - MPMX26_02183 0.15 +2.2
2,236,397 - MPMX26_02183 0.15 -0.6
2,236,397 - MPMX26_02183 0.15 +0.2
2,236,397 - MPMX26_02183 0.15 +0.8
2,236,407 - MPMX26_02183 0.15 -2.2
2,236,407 - MPMX26_02183 0.15 +0.3
2,236,407 - MPMX26_02183 0.15 +0.5
2,236,407 - MPMX26_02183 0.15 -1.0
2,236,407 - MPMX26_02183 0.15 -1.1
2,236,422 - MPMX26_02183 0.16 -1.2
2,236,437 - MPMX26_02183 0.16 -2.0
2,236,442 - MPMX26_02183 0.16 -1.5
2,236,444 - MPMX26_02183 0.16 +1.5
2,236,463 - MPMX26_02183 0.17 +1.1
2,236,463 - MPMX26_02183 0.17 +0.2
2,236,482 - MPMX26_02183 0.17 +0.2
2,236,482 - MPMX26_02183 0.17 -2.5
2,236,494 - MPMX26_02183 0.18 +0.5
2,236,496 - MPMX26_02183 0.18 -3.1
2,236,514 - MPMX26_02183 0.18 -0.5
2,236,560 - MPMX26_02183 0.19 +0.0
2,236,728 - MPMX26_02183 0.24 +0.3
2,236,752 - MPMX26_02183 0.24 +0.3
2,236,752 - MPMX26_02183 0.24 -0.6
2,236,757 - MPMX26_02183 0.24 -0.9

Or see this region's nucleotide sequence