Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01879

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01878 and MPMX26_01879 are separated by 102 nucleotidesMPMX26_01879 and MPMX26_01880 are separated by 57 nucleotides MPMX26_01878: MPMX26_01878 - hypothetical protein, at 1,919,787 to 1,920,761 _01878 MPMX26_01879: MPMX26_01879 - hypothetical protein, at 1,920,864 to 1,922,915 _01879 MPMX26_01880: MPMX26_01880 - hypothetical protein, at 1,922,973 to 1,923,776 _01880 Position (kb) 1920 1921 1922 1923Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1919.868 kb on + strandat 1920.003 kb on + strand, within MPMX26_01878at 1920.010 kb on + strand, within MPMX26_01878at 1920.015 kb on + strand, within MPMX26_01878at 1920.017 kb on + strand, within MPMX26_01878at 1920.017 kb on + strand, within MPMX26_01878at 1920.017 kb on + strand, within MPMX26_01878at 1920.032 kb on + strand, within MPMX26_01878at 1920.032 kb on + strand, within MPMX26_01878at 1920.032 kb on + strand, within MPMX26_01878at 1920.032 kb on + strand, within MPMX26_01878at 1920.042 kb on + strand, within MPMX26_01878at 1920.179 kb on + strand, within MPMX26_01878at 1920.179 kb on + strand, within MPMX26_01878at 1920.193 kb on + strand, within MPMX26_01878at 1920.254 kb on + strand, within MPMX26_01878at 1920.294 kb on + strand, within MPMX26_01878at 1920.294 kb on + strand, within MPMX26_01878at 1920.294 kb on + strand, within MPMX26_01878at 1920.319 kb on + strand, within MPMX26_01878at 1920.319 kb on + strand, within MPMX26_01878at 1920.319 kb on + strand, within MPMX26_01878at 1920.319 kb on + strand, within MPMX26_01878at 1920.334 kb on + strand, within MPMX26_01878at 1920.334 kb on + strand, within MPMX26_01878at 1920.334 kb on + strand, within MPMX26_01878at 1920.334 kb on + strand, within MPMX26_01878at 1920.433 kb on + strand, within MPMX26_01878at 1920.433 kb on + strand, within MPMX26_01878at 1920.433 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.443 kb on + strand, within MPMX26_01878at 1920.451 kb on + strand, within MPMX26_01878at 1920.482 kb on + strand, within MPMX26_01878at 1920.615 kb on + strand, within MPMX26_01878at 1920.623 kb on + strand, within MPMX26_01878at 1920.701 kb on + strandat 1920.701 kb on + strandat 1920.708 kb on + strandat 1920.708 kb on + strandat 1920.708 kb on + strandat 1920.708 kb on + strandat 1920.713 kb on + strandat 1920.713 kb on + strandat 1920.713 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.723 kb on + strandat 1920.733 kb on + strandat 1920.733 kb on + strandat 1920.733 kb on + strandat 1920.739 kb on + strandat 1920.739 kb on + strandat 1920.739 kb on + strandat 1920.739 kb on + strandat 1920.739 kb on + strandat 1920.936 kb on - strandat 1920.961 kb on + strandat 1923.044 kb on - strandat 1923.059 kb on - strand, within MPMX26_01880at 1923.059 kb on - strand, within MPMX26_01880at 1923.210 kb on - strand, within MPMX26_01880at 1923.501 kb on - strand, within MPMX26_01880

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,919,868 + +0.3
1,920,003 + MPMX26_01878 0.22 +0.2
1,920,010 + MPMX26_01878 0.23 +0.5
1,920,015 + MPMX26_01878 0.23 +0.8
1,920,017 + MPMX26_01878 0.24 +0.1
1,920,017 + MPMX26_01878 0.24 +0.4
1,920,017 + MPMX26_01878 0.24 +0.5
1,920,032 + MPMX26_01878 0.25 -0.3
1,920,032 + MPMX26_01878 0.25 +0.4
1,920,032 + MPMX26_01878 0.25 -0.5
1,920,032 + MPMX26_01878 0.25 +0.7
1,920,042 + MPMX26_01878 0.26 +0.1
1,920,179 + MPMX26_01878 0.40 +0.3
1,920,179 + MPMX26_01878 0.40 +0.2
1,920,193 + MPMX26_01878 0.42 +0.5
1,920,254 + MPMX26_01878 0.48 -0.7
1,920,294 + MPMX26_01878 0.52 -0.3
1,920,294 + MPMX26_01878 0.52 +0.2
1,920,294 + MPMX26_01878 0.52 +0.8
1,920,319 + MPMX26_01878 0.55 -0.8
1,920,319 + MPMX26_01878 0.55 +1.0
1,920,319 + MPMX26_01878 0.55 -0.7
1,920,319 + MPMX26_01878 0.55 +0.1
1,920,334 + MPMX26_01878 0.56 +1.6
1,920,334 + MPMX26_01878 0.56 +0.0
1,920,334 + MPMX26_01878 0.56 -2.0
1,920,334 + MPMX26_01878 0.56 +1.9
1,920,433 + MPMX26_01878 0.66 +1.2
1,920,433 + MPMX26_01878 0.66 +0.7
1,920,433 + MPMX26_01878 0.66 -1.8
1,920,443 + MPMX26_01878 0.67 +0.3
1,920,443 + MPMX26_01878 0.67 -0.5
1,920,443 + MPMX26_01878 0.67 -0.2
1,920,443 + MPMX26_01878 0.67 -0.8
1,920,443 + MPMX26_01878 0.67 +0.7
1,920,443 + MPMX26_01878 0.67 +0.5
1,920,443 + MPMX26_01878 0.67 +1.0
1,920,443 + MPMX26_01878 0.67 -0.1
1,920,443 + MPMX26_01878 0.67 +0.6
1,920,443 + MPMX26_01878 0.67 +0.7
1,920,443 + MPMX26_01878 0.67 -0.1
1,920,443 + MPMX26_01878 0.67 +0.3
1,920,443 + MPMX26_01878 0.67 +0.8
1,920,443 + MPMX26_01878 0.67 -0.6
1,920,443 + MPMX26_01878 0.67 +0.3
1,920,443 + MPMX26_01878 0.67 +0.1
1,920,443 + MPMX26_01878 0.67 +0.0
1,920,443 + MPMX26_01878 0.67 +0.9
1,920,443 + MPMX26_01878 0.67 +0.4
1,920,443 + MPMX26_01878 0.67 +0.1
1,920,443 + MPMX26_01878 0.67 +0.3
1,920,443 + MPMX26_01878 0.67 +1.3
1,920,443 + MPMX26_01878 0.67 +0.4
1,920,443 + MPMX26_01878 0.67 -0.6
1,920,443 + MPMX26_01878 0.67 -1.3
1,920,443 + MPMX26_01878 0.67 +0.2
1,920,443 + MPMX26_01878 0.67 +0.4
1,920,443 + MPMX26_01878 0.67 +0.1
1,920,443 + MPMX26_01878 0.67 +0.8
1,920,443 + MPMX26_01878 0.67 -0.7
1,920,443 + MPMX26_01878 0.67 +1.3
1,920,443 + MPMX26_01878 0.67 -0.2
1,920,451 + MPMX26_01878 0.68 -0.9
1,920,482 + MPMX26_01878 0.71 -0.4
1,920,615 + MPMX26_01878 0.85 +0.7
1,920,623 + MPMX26_01878 0.86 +0.2
1,920,701 + +0.2
1,920,701 + +1.1
1,920,708 + +1.2
1,920,708 + +0.4
1,920,708 + -0.1
1,920,708 + +0.7
1,920,713 + -0.0
1,920,713 + -0.6
1,920,713 + +0.3
1,920,723 + -0.3
1,920,723 + +0.4
1,920,723 + -0.8
1,920,723 + +0.2
1,920,723 + -0.5
1,920,723 + +0.8
1,920,723 + -0.2
1,920,723 + -0.3
1,920,733 + +0.5
1,920,733 + -0.5
1,920,733 + -1.1
1,920,739 + -2.7
1,920,739 + +0.8
1,920,739 + -0.8
1,920,739 + -0.3
1,920,739 + -1.6
1,920,936 - -3.2
1,920,961 + +0.1
1,923,044 - +0.1
1,923,059 - MPMX26_01880 0.11 +1.3
1,923,059 - MPMX26_01880 0.11 +2.4
1,923,210 - MPMX26_01880 0.29 -0.1
1,923,501 - MPMX26_01880 0.66 -0.1

Or see this region's nucleotide sequence