Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01203 and MPMX26_01204 are separated by 61 nucleotides MPMX26_01204 and MPMX26_01205 are separated by 108 nucleotides MPMX26_01205 and MPMX26_01206 are separated by 136 nucleotides MPMX26_01206 and MPMX26_01207 overlap by 11 nucleotides
MPMX26_01203: MPMX26_01203 - Ribosomal small subunit pseudouridine synthase A, at 1,278,123 to 1,278,830
_01203
MPMX26_01204: MPMX26_01204 - hypothetical protein, at 1,278,892 to 1,279,206
_01204
MPMX26_01205: MPMX26_01205 - hypothetical protein, at 1,279,315 to 1,280,226
_01205
MPMX26_01206: MPMX26_01206 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 1,280,363 to 1,280,848
_01206
MPMX26_01207: MPMX26_01207 - DNA mismatch repair protein MutL, at 1,280,838 to 1,282,802
_01207
Position (kb)
1279
1280
1281 Strain fitness (log2 ratio)
-1
0
1 at 1278.434 kb on + strand, within MPMX26_01203 at 1278.434 kb on + strand, within MPMX26_01203 at 1278.434 kb on + strand, within MPMX26_01203 at 1278.452 kb on + strand, within MPMX26_01203 at 1278.452 kb on + strand, within MPMX26_01203 at 1278.482 kb on + strand, within MPMX26_01203 at 1278.542 kb on + strand, within MPMX26_01203 at 1278.641 kb on + strand, within MPMX26_01203 at 1278.785 kb on + strand at 1278.805 kb on - strand at 1278.928 kb on - strand, within MPMX26_01204 at 1278.982 kb on - strand, within MPMX26_01204 at 1278.989 kb on - strand, within MPMX26_01204 at 1278.990 kb on - strand, within MPMX26_01204 at 1279.009 kb on - strand, within MPMX26_01204 at 1279.113 kb on - strand, within MPMX26_01204 at 1279.121 kb on - strand, within MPMX26_01204 at 1279.151 kb on - strand, within MPMX26_01204 at 1279.183 kb on - strand at 1279.885 kb on - strand, within MPMX26_01205 at 1280.085 kb on - strand, within MPMX26_01205 at 1280.121 kb on - strand, within MPMX26_01205 at 1280.804 kb on + strand at 1280.847 kb on + strand at 1280.927 kb on + strand at 1280.940 kb on + strand at 1280.940 kb on + strand at 1280.940 kb on + strand at 1280.940 kb on + strand at 1281.061 kb on + strand, within MPMX26_01207 at 1281.108 kb on + strand, within MPMX26_01207 at 1281.108 kb on + strand, within MPMX26_01207 at 1281.108 kb on + strand, within MPMX26_01207 at 1281.116 kb on + strand, within MPMX26_01207 at 1281.147 kb on + strand, within MPMX26_01207 at 1281.147 kb on + strand, within MPMX26_01207 at 1281.186 kb on + strand, within MPMX26_01207 at 1281.186 kb on + strand, within MPMX26_01207 at 1281.198 kb on + strand, within MPMX26_01207 at 1281.198 kb on + strand, within MPMX26_01207 at 1281.213 kb on + strand, within MPMX26_01207
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,278,434 + MPMX26_01203 0.44 +1.1 1,278,434 + MPMX26_01203 0.44 +0.6 1,278,434 + MPMX26_01203 0.44 -0.2 1,278,452 + MPMX26_01203 0.46 -0.4 1,278,452 + MPMX26_01203 0.46 +0.4 1,278,482 + MPMX26_01203 0.51 +0.1 1,278,542 + MPMX26_01203 0.59 -0.4 1,278,641 + MPMX26_01203 0.73 +1.6 1,278,785 + -0.6 1,278,805 - +0.4 1,278,928 - MPMX26_01204 0.11 +0.3 1,278,982 - MPMX26_01204 0.29 -0.3 1,278,989 - MPMX26_01204 0.31 +0.3 1,278,990 - MPMX26_01204 0.31 +0.3 1,279,009 - MPMX26_01204 0.37 +0.7 1,279,113 - MPMX26_01204 0.70 -0.1 1,279,121 - MPMX26_01204 0.73 -0.3 1,279,151 - MPMX26_01204 0.82 +0.2 1,279,183 - -0.8 1,279,885 - MPMX26_01205 0.62 -0.4 1,280,085 - MPMX26_01205 0.84 +0.9 1,280,121 - MPMX26_01205 0.88 +1.2 1,280,804 + +0.5 1,280,847 + -0.1 1,280,927 + +0.4 1,280,940 + -1.7 1,280,940 + +0.8 1,280,940 + +1.4 1,280,940 + -0.0 1,281,061 + MPMX26_01207 0.11 -0.9 1,281,108 + MPMX26_01207 0.14 -0.8 1,281,108 + MPMX26_01207 0.14 +1.3 1,281,108 + MPMX26_01207 0.14 +0.2 1,281,116 + MPMX26_01207 0.14 -0.0 1,281,147 + MPMX26_01207 0.16 +0.5 1,281,147 + MPMX26_01207 0.16 +0.3 1,281,186 + MPMX26_01207 0.18 +0.1 1,281,186 + MPMX26_01207 0.18 +0.1 1,281,198 + MPMX26_01207 0.18 +0.5 1,281,198 + MPMX26_01207 0.18 +1.1 1,281,213 + MPMX26_01207 0.19 -0.1
Or see this region's nucleotide sequence