Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5501

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,504,398	-		GFF5500	0.57	+1.3
2,504,460	+		GFF5500	0.64	-0.6
2,504,460	+		GFF5500	0.64	-0.2
2,504,460	+		GFF5500	0.64	-0.0
2,504,460	+		GFF5500	0.64	+0.1
2,504,461	-		GFF5500	0.64	-0.2
2,504,461	-		GFF5500	0.64	+0.7
2,504,569	-		GFF5500	0.76	+0.4
2,504,704	-				-0.5
2,504,792	+				+0.8
2,504,792	+				+0.6
2,504,945	-		GFF5501	0.38	-0.7
2,504,945	-		GFF5501	0.38	-1.2
2,505,512	+				-0.7
2,505,512	+				-0.2
2,505,513	-				+0.5
2,505,513	-				+0.4
2,505,513	-				-0.2