Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5226

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,242,012	+				-1.0
2,242,012	+				-0.2
2,242,045	+				+0.2
2,242,046	-				-0.3
2,242,046	-				-0.0
2,242,046	-				-0.2
2,242,046	-				-0.2
2,242,100	-				+0.4
2,242,100	-				+0.0
2,242,100	-				+0.2
2,242,100	-				+0.9
2,242,100	-				-0.2
2,242,100	-				+0.2
2,242,115	+				-0.1
2,242,115	+				+0.2
2,242,232	+		GFF5225	0.18	+0.2
2,242,233	-		GFF5225	0.18	-0.3
2,242,571	+		GFF5225	0.69	-0.7
2,242,571	+		GFF5225	0.69	+1.2
2,242,572	-		GFF5225	0.69	-0.6
2,242,572	-		GFF5225	0.69	-0.9
2,242,782	+				-0.7
2,242,869	+				-2.2
2,242,870	-				-0.4
2,242,956	+		GFF5226	0.12	-1.2
2,242,956	+		GFF5226	0.12	+0.4
2,242,957	-		GFF5226	0.12	-2.3
2,242,957	-		GFF5226	0.12	-0.7
2,242,957	-		GFF5226	0.12	-1.4
2,242,957	-		GFF5226	0.12	-0.7
2,242,957	-		GFF5226	0.12	-0.2
2,243,379	+		GFF5226	0.64	-1.4
2,243,494	-		GFF5226	0.77	-3.2
2,243,494	-		GFF5226	0.77	-1.2
2,243,506	-		GFF5226	0.79	-2.2
2,243,506	-		GFF5226	0.79	-0.0
2,243,506	-		GFF5226	0.79	-1.8
2,243,506	-		GFF5226	0.79	-2.1
2,243,763	+				+0.3
2,243,763	+				+0.5
2,243,764	-		GFF5227	0.10	+0.3
2,243,764	-		GFF5227	0.10	-0.1
2,243,916	-		GFF5227	0.27	-0.7
2,243,949	-		GFF5227	0.31	-0.8
2,244,153	-		GFF5227	0.54	+0.9
2,244,344	+		GFF5227	0.76	+0.8
2,244,344	+		GFF5227	0.76	+0.2
2,244,344	+		GFF5227	0.76	-0.2
2,244,344	+		GFF5227	0.76	+0.2
2,244,582	+				-1.4
2,244,583	-				-0.7
2,244,584	+				-0.5
2,244,584	+				+0.1
2,244,584	+				-0.8
2,244,585	-				-0.1