Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5020

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,034,426	-		GFF5019	0.38	-0.4
2,034,590	+		GFF5019	0.51	+0.4
2,034,591	-		GFF5019	0.51	-0.3
2,034,999	-		GFF5019	0.83	-1.2
2,035,294	+				-0.0
2,035,295	-				+0.4
2,035,678	+		GFF5020	0.42	-1.4
2,035,678	+		GFF5020	0.42	-0.0
2,035,679	-		GFF5020	0.42	-0.5
2,035,679	-		GFF5020	0.42	-0.0
2,035,679	-		GFF5020	0.42	-0.1
2,035,679	-		GFF5020	0.42	-0.6
2,036,304	-				+0.6
2,036,330	-				-1.8
2,036,347	+				-0.3
2,036,347	+				+0.2
2,036,350	+				-0.8
2,036,351	-				-0.4
2,036,351	-				+0.4
2,036,362	-				+1.4
2,036,572	+		GFF5021	0.21	+0.4
2,036,593	+		GFF5021	0.23	-0.6
2,036,593	+		GFF5021	0.23	+0.7
2,036,746	+		GFF5021	0.40	-0.4
2,036,746	+		GFF5021	0.40	+0.5
2,037,178	+		GFF5021	0.87	-0.1
2,037,178	+		GFF5021	0.87	-0.5
2,037,178	+		GFF5021	0.87	-0.1
2,037,178	+		GFF5021	0.87	-0.4
2,037,178	+		GFF5021	0.87	-0.7
2,037,178	+		GFF5021	0.87	-0.5
2,037,178	+		GFF5021	0.87	-0.4
2,037,178	+		GFF5021	0.87	-0.1
2,037,178	+		GFF5021	0.87	+0.3
2,037,179	-		GFF5021	0.87	-0.2
2,037,179	-		GFF5021	0.87	-0.7