Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4933

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,947,714	+		GFF4931	0.72	-1.1
1,947,714	+		GFF4931	0.72	-0.9
1,947,714	+		GFF4931	0.72	-1.1
1,947,714	+		GFF4931	0.72	-0.5
1,947,714	+		GFF4931	0.72	+0.6
1,947,714	+		GFF4931	0.72	+0.4
1,947,715	-		GFF4931	0.72	-0.3
1,947,715	-		GFF4931	0.72	-0.0
1,947,715	-		GFF4931	0.72	-0.2
1,947,715	-		GFF4931	0.72	-1.4
1,947,715	-		GFF4931	0.72	-0.2
1,947,715	-		GFF4931	0.72	-0.2
1,947,949	-		GFF4931	0.89	-0.2
1,949,326	-				+0.4
1,949,658	+				-0.5
1,949,658	+				-0.4
1,949,658	+				+0.9
1,949,782	-		GFF4934	0.10	-0.1
1,949,815	-		GFF4934	0.11	-0.6
1,950,171	+		GFF4934	0.21	-0.6
1,950,171	+		GFF4934	0.21	-0.5
1,950,172	-		GFF4934	0.21	-0.0
1,950,213	+		GFF4934	0.22	-0.6
1,950,217	-		GFF4934	0.23	-0.9
1,950,233	-		GFF4934	0.23	-0.6