Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4804

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,815,911	+		GFF4803	0.24	-0.8
1,816,082	+		GFF4803	0.48	-0.2
1,816,083	-		GFF4803	0.48	-0.5
1,816,268	+		GFF4803	0.74	+0.1
1,816,269	-		GFF4803	0.74	+0.1
1,816,488	+				+0.7
1,816,515	+				+0.6
1,816,515	+				+0.8
1,816,515	+				-0.2
1,816,515	+				+0.6
1,816,515	+				+0.1
1,816,515	+				+0.6
1,816,516	-				+0.7
1,816,919	-		GFF4804	0.28	-0.4
1,816,919	-		GFF4804	0.28	+0.9
1,817,017	+		GFF4804	0.35	+0.2
1,817,104	+		GFF4804	0.41	+0.1
1,817,104	+		GFF4804	0.41	-1.2
1,817,105	-		GFF4804	0.41	-0.1
1,817,146	+		GFF4804	0.44	+0.1
1,817,146	+		GFF4804	0.44	+0.4
1,817,413	+		GFF4804	0.63	+0.3
1,817,413	+		GFF4804	0.63	-1.4
1,817,413	+		GFF4804	0.63	-0.6
1,817,413	+		GFF4804	0.63	-0.8
1,817,413	+		GFF4804	0.63	+0.6
1,817,414	-		GFF4804	0.64	-0.4
1,817,414	-		GFF4804	0.64	-0.3
1,817,414	-		GFF4804	0.64	+0.5
1,817,414	-		GFF4804	0.64	-0.3
1,817,419	+		GFF4804	0.64	-0.4
1,817,420	-		GFF4804	0.64	-0.2
1,817,503	+		GFF4804	0.70	-0.3
1,817,503	+		GFF4804	0.70	-0.1
1,817,504	-		GFF4804	0.70	+0.1
1,817,504	-		GFF4804	0.70	-1.0
1,817,504	-		GFF4804	0.70	+0.2
1,817,504	-		GFF4804	0.70	-0.4
1,817,504	-		GFF4804	0.70	-0.3
1,817,569	+		GFF4804	0.75	+0.7
1,817,569	+		GFF4804	0.75	-0.0
1,818,370	-		GFF4805	0.31	+0.8
1,818,408	+		GFF4805	0.33	+0.5
1,818,408	+		GFF4805	0.33	-0.3
1,818,409	-		GFF4805	0.34	-0.1
1,818,499	-		GFF4805	0.40	-0.5