Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4250

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,172,138	+				+0.0
1,172,139	-				-0.9
1,172,139	-				-0.2
1,172,186	+				-0.3
1,172,257	+				-2.7
1,172,258	-				+0.1
1,172,258	-				+0.7
1,172,263	+				+0.4
1,172,293	+				-0.5
1,172,293	+				+0.4
1,172,293	+				-0.3
1,172,294	-				+0.2
1,172,294	-				-0.7
1,172,294	-				-0.1
1,172,294	-				-0.8
1,172,294	-				-0.2
1,172,294	-				-0.2
1,172,294	-				+0.7
1,172,294	-				-1.3
1,172,294	-				-0.0
1,172,294	-				-1.2
1,172,294	-				-0.4
1,172,295	-				+0.0
1,172,326	+				+0.2
1,172,326	+				+0.2
1,172,332	+				+0.4
1,172,332	+				-0.8
1,172,443	+				+0.3
1,172,443	+				+0.7
1,172,444	-				-0.0
1,172,444	-				-0.7
1,172,445	+				+0.3
1,172,446	-				+0.0
1,172,446	-				+0.3
1,172,470	+				+0.6
1,172,477	+				+0.4
1,172,477	+				+0.0
1,172,477	+				-0.5
1,172,478	-				+0.1
1,172,551	+				-0.7
1,172,552	-				+0.4
1,172,609	+				-1.4
1,172,609	+				-0.1
1,172,609	+				+0.3
1,172,609	+				-0.2
1,172,609	+				+0.8
1,172,610	-				-0.2
1,172,610	-				+0.3
1,172,614	+				-0.4
1,172,617	-				+0.4
1,172,617	-				-0.1
1,172,640	+				-0.3
1,172,641	-				+0.1
1,172,647	+				-0.3
1,172,648	-				+0.1
1,172,650	+				+0.1
1,172,662	-				+0.2
1,172,723	+				+0.9
1,172,723	+				+0.4
1,172,724	-				-1.5
1,172,724	-				+0.0
1,172,724	-				-0.7
1,172,770	+				-0.1
1,172,771	-				+0.3
1,172,777	-				+0.0
1,172,777	-				-0.2
1,172,777	-				-0.9
1,172,777	-				+0.6
1,172,865	-				-0.2
1,172,865	-				-0.3
1,172,920	+				-0.1
1,172,921	+				+0.1
1,172,921	+				-0.0
1,172,922	-				+1.1
1,172,922	-				-0.8
1,172,966	+				+0.6
1,172,966	+				+0.3
1,172,967	-				-0.1
1,172,967	-				+0.1
1,172,967	-				-0.0
1,173,035	+				-0.6
1,173,035	+				-0.1
1,173,036	-				+0.1
1,173,036	-				-0.1
1,173,081	-				-0.4
1,173,086	+				-0.7
1,173,086	+				+0.3
1,173,086	+				-0.4
1,173,086	+				+0.4
1,173,087	-				-1.5
1,173,087	-				+1.1
1,173,162	+				-0.3
1,173,162	+				+1.0
1,173,163	-				-0.6
1,173,163	-				+1.1
1,173,163	-				+0.2
1,173,163	-				-0.2
1,173,172	+				-0.0
1,173,172	+				+1.2
1,173,173	-				-0.1
1,173,173	-				+0.3
1,173,173	-				-0.5
1,173,173	-				-0.1
1,173,179	-				-0.5
1,173,188	+				-0.9
1,173,188	+				-0.4
1,173,189	-				+0.1
1,173,189	-				+0.2
1,173,207	+				-0.9
1,173,208	-				+0.1
1,173,208	-				+0.6
1,173,208	-				+0.2
1,173,208	-				-0.2
1,173,208	-				-1.0
1,173,208	-				+0.2
1,173,208	-				-0.6
1,173,228	+				-0.2
1,173,229	-				-0.0
1,173,271	+		GFF4250	0.11	-0.5
1,173,271	+		GFF4250	0.11	-0.3
1,173,296	+		GFF4250	0.12	+1.3
1,173,296	+		GFF4250	0.12	-0.4
1,173,296	+		GFF4250	0.12	-0.5
1,173,296	+		GFF4250	0.12	+0.7
1,173,296	+		GFF4250	0.12	+0.4
1,173,297	-		GFF4250	0.12	-0.9
1,173,297	-		GFF4250	0.12	-0.6
1,173,297	-		GFF4250	0.12	-0.4
1,173,297	-		GFF4250	0.12	-0.1
1,173,297	-		GFF4250	0.12	+0.1
1,173,297	-		GFF4250	0.12	+0.6
1,173,368	+		GFF4250	0.17	-0.3
1,173,369	-		GFF4250	0.17	+0.6
1,173,369	-		GFF4250	0.17	+0.1
1,173,369	-		GFF4250	0.17	-0.3
1,173,409	+		GFF4250	0.19	-0.2
1,173,409	+		GFF4250	0.19	-0.9
1,173,410	-		GFF4250	0.19	+0.1
1,173,446	+		GFF4250	0.21	-0.2
1,173,447	-		GFF4250	0.21	-0.1
1,173,447	-		GFF4250	0.21	-0.8
1,173,525	+		GFF4250	0.26	+0.6
1,173,598	+		GFF4250	0.30	+1.0
1,173,598	+		GFF4250	0.30	-0.6
1,173,598	+		GFF4250	0.30	-0.2
1,173,598	+		GFF4250	0.30	+0.0
1,173,598	+		GFF4250	0.30	+0.2
1,173,598	+		GFF4250	0.30	-0.3
1,173,598	+		GFF4250	0.30	+0.1
1,173,598	+		GFF4250	0.30	-0.3
1,173,598	+		GFF4250	0.30	-0.1
1,173,598	+		GFF4250	0.30	-0.8
1,173,598	+		GFF4250	0.30	-0.9
1,173,598	+		GFF4250	0.30	-0.2
1,173,598	+		GFF4250	0.30	-0.3
1,173,598	+		GFF4250	0.30	+0.1
1,173,598	+		GFF4250	0.30	-0.2
1,173,598	+		GFF4250	0.30	+0.3
1,173,598	+		GFF4250	0.30	+0.3
1,173,599	-		GFF4250	0.30	+0.1
1,173,599	-		GFF4250	0.30	-0.5
1,173,599	-		GFF4250	0.30	+0.0
1,173,599	-		GFF4250	0.30	+0.4
1,173,599	-		GFF4250	0.30	+0.7
1,173,599	-		GFF4250	0.30	+0.4
1,173,599	-		GFF4250	0.30	-0.1
1,173,599	-		GFF4250	0.30	-0.2
1,173,599	-		GFF4250	0.30	+0.0
1,173,599	-		GFF4250	0.30	+0.3
1,173,599	-		GFF4250	0.30	-2.0
1,173,599	-		GFF4250	0.30	-0.0
1,173,599	-		GFF4250	0.30	-0.0
1,173,599	-		GFF4250	0.30	-0.7
1,173,599	-		GFF4250	0.30	-0.7
1,173,599	-		GFF4250	0.30	+0.0
1,173,599	-		GFF4250	0.30	-0.5
1,173,599	-		GFF4250	0.30	-0.6
1,173,599	-		GFF4250	0.30	-0.4
1,173,599	-		GFF4250	0.30	+0.0
1,173,621	+		GFF4250	0.31	+0.2
1,173,622	-		GFF4250	0.32	-0.7
1,173,647	+		GFF4250	0.33	-0.1
1,173,647	+		GFF4250	0.33	+0.3
1,173,689	+		GFF4250	0.35	-0.4
1,173,689	+		GFF4250	0.35	+0.7
1,173,689	+		GFF4250	0.35	-0.2
1,173,738	+		GFF4250	0.38	+0.4
1,173,738	+		GFF4250	0.38	-1.0
1,173,739	-		GFF4250	0.38	-0.2
1,173,739	-		GFF4250	0.38	-0.7
1,173,792	+		GFF4250	0.41	-1.1
1,173,792	+		GFF4250	0.41	-0.2
1,173,792	+		GFF4250	0.41	-0.2
1,173,792	+		GFF4250	0.41	+0.7
1,173,792	+		GFF4250	0.41	+0.2
1,173,792	+		GFF4250	0.41	-0.2
1,173,792	+		GFF4250	0.41	+0.4
1,173,792	+		GFF4250	0.41	-0.4
1,173,792	+		GFF4250	0.41	-0.6
1,173,792	+		GFF4250	0.41	-0.3
1,173,792	+		GFF4250	0.41	-0.5
1,173,792	+		GFF4250	0.41	-0.2
1,173,792	+		GFF4250	0.41	+1.0
1,173,792	+		GFF4250	0.41	+0.3
1,173,793	-		GFF4250	0.42	+0.5
1,173,793	-		GFF4250	0.42	-0.3
1,173,793	-		GFF4250	0.42	+0.2
1,173,793	-		GFF4250	0.42	-0.4
1,173,793	-		GFF4250	0.42	-0.0
1,173,793	-		GFF4250	0.42	+0.2
1,173,793	-		GFF4250	0.42	-0.2
1,173,793	-		GFF4250	0.42	+1.1
1,173,793	-		GFF4250	0.42	+0.2
1,173,793	-		GFF4250	0.42	-0.4
1,173,793	-		GFF4250	0.42	+0.2
1,173,793	-		GFF4250	0.42	-1.2
1,173,908	+		GFF4250	0.48	-0.6
1,173,908	+		GFF4250	0.48	-0.8
1,173,908	+		GFF4250	0.48	+0.5
1,173,908	+		GFF4250	0.48	-0.5
1,173,908	+		GFF4250	0.48	-0.5
1,173,908	+		GFF4250	0.48	-1.7
1,173,909	-		GFF4250	0.48	-1.2
1,173,909	-		GFF4250	0.48	+0.4
1,173,909	-		GFF4250	0.48	-0.2
1,173,909	-		GFF4250	0.48	-0.8
1,173,909	-		GFF4250	0.48	+0.6
1,173,909	-		GFF4250	0.48	+0.6
1,173,909	-		GFF4250	0.48	-0.9
1,173,909	-		GFF4250	0.48	-0.7
1,173,909	-		GFF4250	0.48	-0.6
1,174,149	+		GFF4250	0.62	-0.3
1,174,149	+		GFF4250	0.62	-0.4
1,174,149	+		GFF4250	0.62	+0.1
1,174,149	+		GFF4250	0.62	+0.2
1,174,149	+		GFF4250	0.62	-0.6
1,174,149	+		GFF4250	0.62	-0.2
1,174,150	-		GFF4250	0.62	-0.5
1,174,150	-		GFF4250	0.62	-1.6
1,174,150	-		GFF4250	0.62	-0.2
1,174,150	-		GFF4250	0.62	-0.5
1,174,150	-		GFF4250	0.62	+0.7
1,174,150	-		GFF4250	0.62	-1.4
1,174,150	-		GFF4250	0.62	+0.0
1,174,150	-		GFF4250	0.62	-1.2
1,174,150	-		GFF4250	0.62	-0.1
1,174,150	-		GFF4250	0.62	-0.2
1,174,150	-		GFF4250	0.62	-0.1
1,174,175	+		GFF4250	0.64	-0.5
1,174,175	+		GFF4250	0.64	-0.2
1,174,175	+		GFF4250	0.64	-1.4
1,174,325	+		GFF4250	0.73	-0.6
1,174,325	+		GFF4250	0.73	-0.0
1,174,325	+		GFF4250	0.73	+0.6
1,174,326	-		GFF4250	0.73	+0.3
1,174,326	-		GFF4250	0.73	+0.2
1,174,326	-		GFF4250	0.73	-1.1
1,174,326	-		GFF4250	0.73	-0.3
1,174,326	-		GFF4250	0.73	+0.2
1,174,326	-		GFF4250	0.73	+1.9
1,174,326	-		GFF4250	0.73	-0.0
1,174,398	+		GFF4250	0.77	+0.2
1,174,398	+		GFF4250	0.77	+0.2
1,174,399	-		GFF4250	0.77	-0.1
1,174,399	-		GFF4250	0.77	-0.5
1,174,420	+		GFF4250	0.78	+1.1
1,174,420	+		GFF4250	0.78	+0.1
1,174,420	+		GFF4250	0.78	-0.5
1,174,421	-		GFF4250	0.78	-0.0
1,174,421	-		GFF4250	0.78	+0.0
1,174,528	+		GFF4250	0.85	+0.7
1,174,528	+		GFF4250	0.85	-0.1
1,174,528	+		GFF4250	0.85	+0.2
1,174,528	+		GFF4250	0.85	-2.3
1,174,529	-		GFF4250	0.85	+0.2
1,174,564	+		GFF4250	0.87	+0.3
1,174,706	+				-0.7
1,174,706	+				+0.4
1,174,706	+				-0.1
1,174,706	+				-0.0
1,174,706	+				-0.0
1,174,706	+				+1.6
1,174,707	-				+0.6
1,174,707	-				+0.4
1,174,707	-				+0.0
1,174,707	-				-0.4
1,174,707	-				-0.5
1,174,707	-				+1.0
1,174,746	-				+0.1
1,174,836	-				-0.4
1,174,836	-				-0.4
1,174,851	+				+0.5
1,174,851	+				-0.7
1,174,851	+				+0.3
1,174,852	-				+0.6
1,174,852	-				-0.4
1,174,852	-				+0.3
1,174,852	-				-0.2
1,174,852	-				-0.2
1,174,896	+				-0.2
1,174,896	+				+1.1
1,174,896	+				-0.1
1,174,896	+				-0.6
1,174,897	-				-0.2
1,174,897	-				-0.2
1,175,012	+				-0.1
1,175,012	+				-0.1
1,175,012	+				+0.2
1,175,013	-				+0.1
1,175,013	-				+0.9
1,175,013	-				+0.0
1,175,051	-				+0.1
1,175,051	-				-0.8
1,175,062	+				+0.1
1,175,062	+				-1.0
1,175,063	-				+0.9