Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4191

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,106,551	-				+0.2
1,106,633	-				-0.9
1,106,955	+		GFF4190	0.43	-0.1
1,106,955	+		GFF4190	0.43	+0.2
1,106,955	+		GFF4190	0.43	-1.4
1,106,955	+		GFF4190	0.43	+0.2
1,106,956	-		GFF4190	0.43	-0.1
1,106,956	-		GFF4190	0.43	-0.6
1,106,956	-		GFF4190	0.43	-2.4
1,107,166	+		GFF4190	0.82	-0.8
1,107,167	-		GFF4190	0.82	+0.6
1,107,167	-		GFF4190	0.82	+0.0
1,107,167	-		GFF4190	0.82	+0.5
1,107,167	-		GFF4190	0.82	-0.5
1,107,167	-		GFF4190	0.82	-0.1
1,107,201	+		GFF4190	0.88	-1.4
1,107,201	+		GFF4190	0.88	-0.7
1,107,201	+		GFF4190	0.88	-0.1
1,107,201	+		GFF4190	0.88	+0.2
1,107,201	+		GFF4190	0.88	-0.4
1,107,202	-		GFF4190	0.89	+0.1
1,107,202	-		GFF4190	0.89	+0.4
1,107,202	-		GFF4190	0.89	+0.2
1,107,202	-		GFF4190	0.89	+0.2
1,107,202	-		GFF4190	0.89	+0.5
1,107,202	-		GFF4190	0.89	-0.1
1,107,323	+				+0.1
1,107,323	+				+0.2
1,107,323	+				+0.1
1,107,324	-				+0.2
1,107,324	-				-0.2
1,107,324	-				-1.0
1,107,461	+		GFF4191	0.28	+1.4
1,107,461	+		GFF4191	0.28	-0.7
1,107,461	+		GFF4191	0.28	+0.4
1,107,461	+		GFF4191	0.28	+0.7
1,107,461	+		GFF4191	0.28	+0.4
1,107,462	-		GFF4191	0.28	+0.9
1,107,462	-		GFF4191	0.28	+1.3
1,107,462	-		GFF4191	0.28	+0.1
1,107,462	-		GFF4191	0.28	-1.1
1,107,462	-		GFF4191	0.28	+0.9
1,107,462	-		GFF4191	0.28	-0.2
1,107,728	+		GFF4191	0.65	+0.2
1,107,728	+		GFF4191	0.65	+0.9
1,107,728	+		GFF4191	0.65	+1.0
1,107,728	+		GFF4191	0.65	-0.4
1,107,728	+		GFF4191	0.65	-0.1
1,107,729	-		GFF4191	0.65	-1.0
1,107,729	-		GFF4191	0.65	-0.3
1,107,729	-		GFF4191	0.65	+0.5
1,107,729	-		GFF4191	0.65	+1.0
1,107,974	+				+0.4
1,107,974	+				-0.2
1,107,975	-				-0.1
1,107,975	-				-0.0
1,107,975	-				-0.4
1,107,975	-				+0.2
1,107,975	-				+0.2
1,107,975	-				+0.4
1,107,975	-				+0.5
1,107,988	+				-0.3
1,107,988	+				-0.3
1,107,989	-				-0.3
1,107,989	-				-0.9
1,107,989	-				-0.1
1,107,989	-				-0.1
1,108,076	+		GFF4192	0.44	+0.3
1,108,076	+		GFF4192	0.44	-1.1
1,108,076	+		GFF4192	0.44	+0.4
1,108,076	+		GFF4192	0.44	-1.0
1,108,077	-		GFF4192	0.44	-0.9
1,108,077	-		GFF4192	0.44	-0.4
1,108,082	+		GFF4192	0.47	-0.8
1,108,082	+		GFF4192	0.47	-0.5
1,108,082	+		GFF4192	0.47	-0.1
1,108,082	+		GFF4192	0.47	-0.3
1,108,082	+		GFF4192	0.47	+0.1
1,108,082	+		GFF4192	0.47	+0.4
1,108,082	+		GFF4192	0.47	-0.0
1,108,083	-		GFF4192	0.47	+0.8
1,108,083	-		GFF4192	0.47	+0.7
1,108,083	-		GFF4192	0.47	-0.8
1,108,157	+		GFF4192	0.79	-0.1
1,108,157	+		GFF4192	0.79	-0.1
1,108,157	+		GFF4192	0.79	-1.6
1,108,158	-		GFF4192	0.79	-0.4
1,108,158	-		GFF4192	0.79	+0.5
1,108,252	+				-0.7
1,108,252	+				-0.5
1,108,252	+				+0.1
1,108,252	+				-0.0
1,108,252	+				-0.8
1,108,252	+				-1.1
1,108,252	+				+0.0
1,108,252	+				+1.1
1,108,252	+				-0.3
1,108,253	-				+0.3
1,108,253	-				+0.8
1,108,253	-				-0.5
1,108,253	-				-0.2
1,108,253	-				-0.2
1,108,253	-				+0.8
1,108,253	-				-0.5
1,108,321	+				-0.5
1,108,324	+				+0.2
1,108,325	-				-0.4
1,108,325	-				+0.2
1,108,341	+				+0.8
1,108,441	-		GFF4193	0.60	-1.1
1,108,441	-		GFF4193	0.60	+0.0
1,108,526	+				-1.6
1,108,527	+				+0.4
1,108,528	-				-0.4
1,108,581	+		GFF4194	0.42	+0.5
1,108,581	+		GFF4194	0.42	+0.4
1,108,581	+		GFF4194	0.42	+0.1
1,108,581	+		GFF4194	0.42	+0.2
1,108,581	+		GFF4194	0.42	+0.4
1,108,581	+		GFF4194	0.42	+0.2
1,108,582	-		GFF4194	0.43	-0.6
1,108,582	-		GFF4194	0.43	-0.1
1,108,589	+		GFF4194	0.47	-0.4
1,108,590	-		GFF4194	0.48	+1.1
1,108,833	+		GFF4195	0.10	-0.8
1,108,842	+		GFF4195	0.11	-1.2
1,108,842	+		GFF4195	0.11	+0.1
1,108,842	+		GFF4195	0.11	-0.4
1,108,842	+		GFF4195	0.11	-0.9
1,108,842	+		GFF4195	0.11	+0.1
1,108,842	+		GFF4195	0.11	-0.1
1,108,843	-		GFF4195	0.11	-0.5
1,108,843	-		GFF4195	0.11	+1.0
1,108,843	-		GFF4195	0.11	-0.8
1,108,843	-		GFF4195	0.11	-0.4
1,108,843	-		GFF4195	0.11	+0.3
1,108,843	-		GFF4195	0.11	+0.1
1,108,843	-		GFF4195	0.11	-0.1
1,108,909	+		GFF4195	0.17	+0.6
1,108,909	+		GFF4195	0.17	-0.2
1,108,909	+		GFF4195	0.17	+0.0
1,108,909	+		GFF4195	0.17	+0.5
1,108,910	-		GFF4195	0.17	-0.5
1,108,910	-		GFF4195	0.17	-0.1