Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4144

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,053,569	-		GFF4143	0.31	-0.1
1,053,863	-		GFF4143	0.52	+0.2
1,053,868	+		GFF4143	0.53	+0.5
1,053,988	+		GFF4143	0.62	+0.7
1,053,994	+		GFF4143	0.62	+0.1
1,054,082	-		GFF4143	0.68	-0.4
1,054,082	-		GFF4143	0.68	+0.3
1,054,082	-		GFF4143	0.68	+0.1
1,054,082	-		GFF4143	0.68	-0.2
1,054,082	-		GFF4143	0.68	-0.3
1,054,150	+		GFF4143	0.73	+0.6
1,054,150	+		GFF4143	0.73	-0.5
1,054,151	-		GFF4143	0.73	-0.4
1,054,339	+		GFF4143	0.87	-0.9
1,054,340	-		GFF4143	0.87	-0.3
1,054,340	-		GFF4143	0.87	+0.4
1,054,682	+		GFF4144	0.22	+0.1
1,054,683	-		GFF4144	0.22	-0.6
1,054,956	-		GFF4144	0.64	-0.4
1,055,439	+		GFF4145	0.26	-0.2
1,055,440	-		GFF4145	0.26	-0.2
1,055,440	-		GFF4145	0.26	-1.0
1,055,440	-		GFF4145	0.26	-1.2
1,055,604	+		GFF4145	0.45	-0.0
1,055,604	+		GFF4145	0.45	-0.1
1,055,604	+		GFF4145	0.45	+0.6
1,055,604	+		GFF4145	0.45	-0.4
1,055,604	+		GFF4145	0.45	+0.9
1,055,605	-		GFF4145	0.45	-0.6
1,055,605	-		GFF4145	0.45	-0.5
1,055,605	-		GFF4145	0.45	-0.2
1,055,669	+		GFF4145	0.52	+0.3
1,055,976	+		GFF4145	0.87	+0.1
1,056,075	+				+0.4
1,056,075	+				+1.4
1,056,075	+				-1.6
1,056,076	-				+0.0
1,056,076	-				+1.6
1,056,076	-				-0.3
1,056,076	-				+0.8
1,056,076	-				-1.3
1,056,098	+				+1.3
1,056,098	+				-0.1
1,056,098	+				+0.6
1,056,114	+				-0.0
1,056,114	+				+0.5
1,056,114	+				+0.6