Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3495

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
374,362	-		GFF3494	0.44	+0.6
374,683	-		GFF3494	0.83	+0.4
375,345	+				+0.0
375,346	-				+0.7
375,497	+		GFF3495	0.23	+0.8
375,497	+		GFF3495	0.23	-0.8
375,498	-		GFF3495	0.23	-1.2
375,624	+		GFF3495	0.44	-0.2
375,624	+		GFF3495	0.44	-1.2
375,624	+		GFF3495	0.44	-0.7
375,624	+		GFF3495	0.44	+0.4
375,624	+		GFF3495	0.44	-0.0
375,625	-		GFF3495	0.44	-0.0
375,625	-		GFF3495	0.44	-0.4
375,926	+				+1.0
376,194	+		GFF3496	0.38	+0.1