Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2730

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
323,565	+				-0.2
323,565	+				-0.7
323,565	+				+1.0
323,565	+				-0.5
323,565	+				-0.3
323,566	-				-0.2
323,566	-				-0.0
323,566	-				-1.0
323,566	-				-0.6
323,566	-				-0.3
323,603	+				-0.0
323,603	+				+0.1
323,603	+				+0.1
323,604	-				-0.1
323,604	-				+0.2
323,604	-				-2.0
323,640	-				+0.1
323,663	-				-0.3
323,687	+				-0.1
323,687	+				+0.5
323,687	+				+0.2
323,687	+				+0.1
323,688	-				+0.4
323,688	-				-0.1
323,695	+				+0.0
323,695	+				-0.3
323,695	+				+1.2
323,695	+				+2.0
323,695	+				-1.2
323,818	+				+0.5
323,818	+				-0.8
323,818	+				-0.6
323,819	-				+2.1
323,819	-				-0.1
323,819	-				+0.4
324,088	+				+0.9
324,088	+				-1.0
324,088	+				-0.2
324,088	+				-0.4
324,088	+				+0.1
324,088	+				+0.4
324,088	+				-0.1
324,089	-				+0.2
324,089	-				-0.4
324,089	-				+0.0
324,089	-				-0.1
324,089	-				+0.0
324,089	-				+0.3
324,089	-				-1.1
324,089	-				-1.0
324,638	+		GFF2730	0.24	-0.2
324,789	-		GFF2730	0.32	-0.2
325,238	+		GFF2730	0.56	-1.3
325,238	+		GFF2730	0.56	-0.5
325,238	+		GFF2730	0.56	-0.4
325,238	+		GFF2730	0.56	-0.6
325,238	+		GFF2730	0.56	-0.2
325,239	-		GFF2730	0.56	+0.0
325,239	-		GFF2730	0.56	-0.2
325,239	-		GFF2730	0.56	-0.6
325,331	+		GFF2730	0.61	+0.4
325,331	+		GFF2730	0.61	+0.1
325,331	+		GFF2730	0.61	+0.1
325,331	+		GFF2730	0.61	-0.0
325,332	-		GFF2730	0.62	-1.3
325,332	-		GFF2730	0.62	+0.2
325,886	+				-0.5
325,886	+				-1.9
325,886	+				+0.9
325,887	-				+0.1
325,887	-				-0.8
326,199	+		GFF2731	0.29	-0.0
326,199	+		GFF2731	0.29	-2.2
326,200	-		GFF2731	0.29	-1.4
326,200	-		GFF2731	0.29	-0.6
326,409	+		GFF2731	0.72	+1.1
326,409	+		GFF2731	0.72	-0.8
326,410	-		GFF2731	0.72	-0.7
326,410	-		GFF2731	0.72	+0.2
326,410	-		GFF2731	0.72	-0.1
326,410	-		GFF2731	0.72	-0.2
326,410	-		GFF2731	0.72	-0.2
326,772	-				-0.7
326,814	+				-0.3
326,814	+				+0.1
326,814	+				-0.2
326,814	+				-0.5
326,814	+				+0.8
326,814	+				+0.3
326,815	-				-0.2
326,815	-				-1.1
326,815	-				-0.1
326,815	-				-0.3
326,815	-				+0.1
326,816	+				-0.2
326,817	-				+0.1
326,817	-				-0.6
326,879	+				-1.1
326,879	+				-0.8
326,879	+				-0.4
326,879	+				+0.4
326,879	+				+0.7
326,879	+				-0.0
326,879	+				-0.3
326,879	+				+0.2
326,880	-				+0.2
326,880	-				-0.4
326,880	-				-0.4
326,880	-				+0.3
326,885	+				+0.6
326,885	+				+0.4
326,885	+				-0.0
326,885	+				+0.3
326,885	+				+1.2
326,885	+				-0.0
326,886	-				-0.2
326,886	-				-0.0
326,886	-				+0.2