Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2683

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
274,202	+		GFF2682	0.85	+1.5
274,269	-		GFF2682	0.89	-0.2
274,269	-		GFF2682	0.89	-0.5
274,274	+		GFF2682	0.90	-2.0
274,275	-		GFF2682	0.90	+0.8
274,275	-		GFF2682	0.90	-0.5
274,283	-				+0.3
274,364	+				-0.3
274,364	+				+1.1
274,365	-				+0.1
274,365	-				+0.7
274,365	-				-0.4
274,365	-				+0.2
274,397	+				-0.6
274,398	-				+0.3
274,398	-				-0.1
274,973	-		GFF2683	0.18	+0.5
275,036	+		GFF2683	0.57	+0.5
275,219	-				-0.5
275,219	-				-0.5
275,868	+		GFF2684	0.83	+0.1
275,869	-		GFF2684	0.83	+0.5
275,989	-				+0.3