Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1591

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
445,246	+				-0.6
445,331	-		GFF1590	0.18	-0.1
445,331	-		GFF1590	0.18	+0.4
446,222	+				-1.0
446,222	+				+0.2
446,222	+				-0.0
446,223	-				-0.4
446,223	-				-0.0
446,223	-				+0.3
446,223	-				+0.0
446,223	-				-0.1
446,264	+				+1.2
446,265	-				-0.4
446,531	+		GFF1591	0.30	+1.3
446,730	-		GFF1591	0.49	+0.1
446,730	-		GFF1591	0.49	-1.3
446,772	+		GFF1591	0.53	-1.0
446,942	+		GFF1591	0.69	-0.9
446,943	-		GFF1591	0.70	+0.1
446,943	-		GFF1591	0.70	+0.0
447,029	+		GFF1591	0.78	-1.1
447,029	+		GFF1591	0.78	+0.4
447,030	-		GFF1591	0.78	+0.6
447,308	-				+1.4
447,354	+				+0.2
448,006	+		GFF1592	0.77	-0.3
448,121	+				-0.6
448,121	+				+0.2