Strain Fitness in Escherichia fergusonii Becca around EFB2_01247

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
1,295,014	+		EFB2_01245	0.64	-0.4
1,295,014	+		EFB2_01245	0.64	-0.3
1,295,014	+		EFB2_01245	0.64	+1.8
1,295,015	-		EFB2_01245	0.64	+0.4
1,295,015	-		EFB2_01245	0.64	-0.2
1,295,015	-		EFB2_01245	0.64	+0.5
1,295,015	-		EFB2_01245	0.64	+0.3
1,295,015	-		EFB2_01245	0.64	-0.3
1,295,015	-		EFB2_01245	0.64	+0.1
1,295,019	-		EFB2_01245	0.65	+0.6
1,295,019	-		EFB2_01245	0.65	-0.3
1,295,019	-		EFB2_01245	0.65	+0.7
1,295,074	-		EFB2_01245	0.82	+0.5
1,295,085	+		EFB2_01245	0.85	-0.4
1,295,085	+		EFB2_01245	0.85	-2.7
1,295,086	-		EFB2_01245	0.85	-0.1
1,295,086	-		EFB2_01245	0.85	+1.4
1,295,127	+				-1.4
1,295,127	+				-0.0
1,295,127	+				-0.0
1,295,127	+				+0.8
1,295,127	+				-1.4
1,295,127	+				+1.2
1,295,127	+				-1.4
1,295,127	+				-0.9
1,295,127	+				+1.2
1,295,127	+				+1.1
1,295,127	+				+0.2
1,295,127	+				-0.1
1,295,128	-				-0.1
1,295,128	-				+0.3
1,295,128	-				+2.2
1,295,128	-				-0.4
1,295,128	-				+0.3
1,295,128	-				-1.3
1,295,128	-				-1.7
1,295,128	-				+0.7
1,295,128	-				+0.1
1,295,128	-				-0.9
1,295,128	-				-0.8
1,295,128	-				+1.8
1,295,128	-				-0.3
1,295,128	-				-0.2
1,295,128	-				+0.3
1,295,128	-				+0.9
1,295,163	+				-0.6
1,295,220	+		EFB2_01246	0.13	-0.5
1,295,220	+		EFB2_01246	0.13	+0.8
1,295,220	+		EFB2_01246	0.13	-0.2
1,295,221	-		EFB2_01246	0.13	+1.1
1,295,247	+		EFB2_01246	0.17	+1.0
1,295,247	+		EFB2_01246	0.17	+0.3
1,295,247	+		EFB2_01246	0.17	+0.3
1,295,248	-		EFB2_01246	0.17	-1.3
1,295,248	-		EFB2_01246	0.17	+2.1
1,295,248	-		EFB2_01246	0.17	-0.6
1,295,248	-		EFB2_01246	0.17	+0.4
1,295,306	+		EFB2_01246	0.25	+1.2
1,295,306	+		EFB2_01246	0.25	+0.6
1,295,306	+		EFB2_01246	0.25	+0.1
1,295,306	+		EFB2_01246	0.25	-2.0
1,295,306	+		EFB2_01246	0.25	-0.7
1,295,307	-		EFB2_01246	0.25	-1.2
1,295,307	-		EFB2_01246	0.25	+0.4
1,295,324	+		EFB2_01246	0.27	+0.2
1,295,324	+		EFB2_01246	0.27	-1.8
1,295,324	+		EFB2_01246	0.27	-1.0
1,295,324	+		EFB2_01246	0.27	-1.6
1,295,324	+		EFB2_01246	0.27	-2.1
1,295,324	+		EFB2_01246	0.27	-0.2
1,295,324	+		EFB2_01246	0.27	-0.5
1,295,324	+		EFB2_01246	0.27	+4.1
1,295,325	-		EFB2_01246	0.27	+0.3
1,295,325	-		EFB2_01246	0.27	+0.1
1,295,325	-		EFB2_01246	0.27	-0.3
1,295,325	-		EFB2_01246	0.27	+0.4
1,295,331	+		EFB2_01246	0.28	+0.8
1,295,331	+		EFB2_01246	0.28	+0.8
1,295,331	+		EFB2_01246	0.28	-0.9
1,295,331	+		EFB2_01246	0.28	-1.1
1,295,331	+		EFB2_01246	0.28	-0.0
1,295,331	+		EFB2_01246	0.28	+0.5
1,295,331	+		EFB2_01246	0.28	-0.1
1,295,331	+		EFB2_01246	0.28	+0.3
1,295,332	-		EFB2_01246	0.28	+1.4
1,295,332	-		EFB2_01246	0.28	+0.6
1,295,332	-		EFB2_01246	0.28	-2.4
1,295,332	-		EFB2_01246	0.28	-0.6
1,295,389	-		EFB2_01246	0.36	+0.2
1,295,389	-		EFB2_01246	0.36	-0.6
1,295,389	-		EFB2_01246	0.36	-0.4
1,295,391	+		EFB2_01246	0.36	-0.6
1,295,391	+		EFB2_01246	0.36	+0.7
1,295,391	+		EFB2_01246	0.36	-1.3
1,295,392	-		EFB2_01246	0.36	+0.8
1,295,396	+		EFB2_01246	0.37	+0.2
1,295,465	+		EFB2_01246	0.46	+0.6
1,295,465	+		EFB2_01246	0.46	-0.1
1,295,465	+		EFB2_01246	0.46	+0.8
1,295,466	-		EFB2_01246	0.46	-0.9
1,295,466	-		EFB2_01246	0.46	-0.7
1,295,473	-		EFB2_01246	0.47	-0.3
1,295,558	+		EFB2_01246	0.59	+0.1
1,295,558	+		EFB2_01246	0.59	+0.7
1,295,559	-		EFB2_01246	0.59	+0.2
1,295,559	-		EFB2_01246	0.59	+0.2
1,295,561	+		EFB2_01246	0.59	+0.0
1,295,567	+		EFB2_01246	0.60	-0.4
1,295,584	+		EFB2_01246	0.62	+0.7
1,295,584	+		EFB2_01246	0.62	+0.8
1,295,585	-		EFB2_01246	0.62	+0.7
1,295,585	-		EFB2_01246	0.62	-0.7
1,295,585	-		EFB2_01246	0.62	-1.2
1,295,585	-		EFB2_01246	0.62	+1.0
1,295,639	+		EFB2_01246	0.70	-0.9
1,295,639	+		EFB2_01246	0.70	+0.7
1,295,639	+		EFB2_01246	0.70	+1.9
1,295,639	+		EFB2_01246	0.70	-0.3
1,295,640	-		EFB2_01246	0.70	+0.7
1,295,640	-		EFB2_01246	0.70	-1.5
1,295,640	-		EFB2_01246	0.70	+0.7
1,295,640	-		EFB2_01246	0.70	-0.7
1,295,640	-		EFB2_01246	0.70	-0.2
1,295,640	-		EFB2_01246	0.70	+0.1
1,295,664	-		EFB2_01246	0.73	+0.4
1,295,689	+		EFB2_01246	0.77	-2.0
1,295,689	+		EFB2_01246	0.77	-0.1
1,295,689	+		EFB2_01246	0.77	-1.1
1,295,689	+		EFB2_01246	0.77	-0.5
1,295,689	+		EFB2_01246	0.77	+1.2
1,295,689	+		EFB2_01246	0.77	+0.1
1,295,690	-		EFB2_01246	0.77	-2.2
1,295,690	-		EFB2_01246	0.77	+1.0
1,295,690	-		EFB2_01246	0.77	-0.6
1,295,690	-		EFB2_01246	0.77	+2.4
1,295,690	-		EFB2_01246	0.77	-0.1
1,295,690	-		EFB2_01246	0.77	+0.3
1,295,690	-		EFB2_01246	0.77	+0.1
1,295,690	-		EFB2_01246	0.77	+0.3
1,295,774	+		EFB2_01246	0.88	+0.3
1,295,775	-		EFB2_01246	0.88	+1.3
1,295,775	-		EFB2_01246	0.88	+1.3
1,295,775	-		EFB2_01246	0.88	+0.9
1,295,775	-		EFB2_01246	0.88	+0.5
1,295,776	+		EFB2_01246	0.88	-0.6
1,295,776	+		EFB2_01246	0.88	-0.3
1,295,776	+		EFB2_01246	0.88	+0.4
1,295,776	+		EFB2_01246	0.88	-0.5
1,295,776	+		EFB2_01246	0.88	-0.3
1,295,776	+		EFB2_01246	0.88	+0.1
1,295,776	+		EFB2_01246	0.88	-1.0
1,295,776	+		EFB2_01246	0.88	+0.0
1,295,776	+		EFB2_01246	0.88	+0.6
1,295,777	-		EFB2_01246	0.88	+0.4
1,295,777	-		EFB2_01246	0.88	-1.3
1,295,777	-		EFB2_01246	0.88	-0.4
1,295,777	-		EFB2_01246	0.88	+1.3
1,295,777	-		EFB2_01246	0.88	+1.5
1,295,777	-		EFB2_01246	0.88	+0.3
1,295,777	-		EFB2_01246	0.88	-0.4
1,295,777	-		EFB2_01246	0.88	+0.1
1,295,777	-		EFB2_01246	0.88	-0.0
1,295,777	-		EFB2_01246	0.88	-0.1
1,295,780	+		EFB2_01246	0.89	-0.7
1,295,780	+		EFB2_01246	0.89	-2.4
1,295,780	+		EFB2_01246	0.89	-1.1
1,295,780	+		EFB2_01246	0.89	-0.4
1,295,780	+		EFB2_01246	0.89	+0.8
1,295,780	+		EFB2_01246	0.89	-0.5
1,295,780	+		EFB2_01246	0.89	-0.7
1,295,780	+		EFB2_01246	0.89	-0.7
1,295,780	+		EFB2_01246	0.89	-0.7
1,295,780	+		EFB2_01246	0.89	+1.7
1,295,780	+		EFB2_01246	0.89	-2.6
1,295,780	+		EFB2_01246	0.89	-0.7
1,295,780	+		EFB2_01246	0.89	-1.0
1,295,780	+		EFB2_01246	0.89	-1.1
1,295,780	+		EFB2_01246	0.89	-0.1
1,295,780	+		EFB2_01246	0.89	+0.4
1,295,780	+		EFB2_01246	0.89	-1.4
1,295,780	+		EFB2_01246	0.89	+1.1
1,295,780	+		EFB2_01246	0.89	+2.3
1,295,780	+		EFB2_01246	0.89	+0.2
1,295,780	+		EFB2_01246	0.89	+0.9
1,295,780	+		EFB2_01246	0.89	-0.2
1,295,780	+		EFB2_01246	0.89	-0.3
1,295,780	+		EFB2_01246	0.89	-0.6
1,295,781	-		EFB2_01246	0.89	+0.2
1,295,781	-		EFB2_01246	0.89	-2.6
1,295,781	-		EFB2_01246	0.89	+0.4
1,295,781	-		EFB2_01246	0.89	-0.7
1,295,781	-		EFB2_01246	0.89	+0.3
1,295,781	-		EFB2_01246	0.89	+1.0
1,295,781	-		EFB2_01246	0.89	+0.7
1,295,781	-		EFB2_01246	0.89	-0.4
1,295,781	-		EFB2_01246	0.89	+0.9
1,295,781	-		EFB2_01246	0.89	-0.9
1,295,781	-		EFB2_01246	0.89	-0.6
1,295,781	-		EFB2_01246	0.89	-0.6
1,295,781	-		EFB2_01246	0.89	-2.6
1,295,781	-		EFB2_01246	0.89	+0.4
1,295,781	-		EFB2_01246	0.89	+0.4
1,295,781	-		EFB2_01246	0.89	+0.5
1,295,781	-		EFB2_01246	0.89	+0.4
1,295,781	-		EFB2_01246	0.89	+0.3
1,295,781	-		EFB2_01246	0.89	+3.4
1,295,783	+		EFB2_01246	0.89	+0.4
1,295,783	+		EFB2_01246	0.89	+0.1
1,295,783	+		EFB2_01246	0.89	+0.1
1,295,783	+		EFB2_01246	0.89	-1.4
1,295,784	-		EFB2_01246	0.89	+0.3
1,295,849	+				+0.5
1,295,849	+				-0.6
1,295,850	-				-1.0
1,295,861	+				-0.9
1,295,861	+				+0.8
1,295,861	+				+0.7
1,295,861	+				-0.1
1,295,861	+				-2.0
1,295,862	-				+0.1
1,295,868	+				-0.9
1,295,868	+				+0.6
1,295,868	+				+1.0
1,295,868	+				+1.7
1,295,868	+				+0.3
1,295,868	+				-0.4
1,295,869	-				-0.8
1,295,885	-				-0.0
1,295,885	-				+0.9
1,295,885	-				+0.5
1,295,887	+				-0.5
1,295,887	+				-0.6
1,295,887	+				+0.5
1,295,887	+				+0.5
1,295,888	-				+0.9
1,295,888	-				+0.6
1,295,888	-				+0.5
1,295,888	-				+0.9
1,295,888	-				-0.2
1,295,890	+				-1.1
1,295,891	-				-0.4
1,295,891	-				-0.3
1,295,892	+				+0.1
1,295,893	-				+1.5
1,295,893	-				-1.2
1,295,896	+				+0.3
1,295,897	-				-0.2
1,295,897	-				-0.6
1,295,909	+				+0.5
1,295,909	+				-0.6
1,295,909	+				-0.0
1,295,909	+				+1.4
1,295,920	+				-2.3
1,295,920	+				+0.0
1,295,941	-				-0.1
1,295,949	+				+1.3
1,295,949	+				+0.5
1,295,949	+				-0.4
1,295,949	+				+0.1
1,295,949	+				+0.4
1,295,949	+				+0.9
1,295,950	-				+0.7
1,295,950	-				+0.2
1,295,950	-				-0.2
1,295,950	-				+1.1
1,295,951	+				-0.3
1,295,951	+				+0.0
1,295,951	+				+2.1
1,295,951	+				+0.8
1,295,951	+				+0.0
1,295,951	+				+1.0
1,295,951	+				+0.6
1,295,951	+				-0.1
1,295,951	+				-1.4
1,295,951	+				+0.9
1,295,951	+				+0.3
1,295,951	+				+0.3
1,295,951	+				-0.1
1,295,951	+				+1.3
1,295,951	+				+0.3
1,295,951	+				+0.9
1,295,951	+				+2.0
1,295,951	+				-1.8
1,295,951	+				-0.3
1,295,951	+				+0.8
1,295,951	+				+1.2
1,295,951	+				+0.6
1,295,951	+				-1.2
1,295,951	+				+0.6
1,295,951	+				+0.4
1,295,951	+				+0.0
1,295,951	+				-0.7
1,295,951	+				-0.8
1,295,952	-				+1.0
1,295,952	-				+0.2
1,295,952	-				+0.2
1,295,952	-				+0.6
1,295,952	-				+1.3
1,295,952	-				-1.5
1,295,952	-				+0.4
1,295,952	-				-1.4
1,295,952	-				-1.1
1,295,952	-				+0.6
1,295,952	-				+1.6
1,295,952	-				-1.9
1,295,952	-				-0.9
1,295,952	-				+0.3
1,295,952	-				-0.1
1,295,952	-				+0.3
1,295,952	-				-0.1
1,295,952	-				+0.1
1,295,952	-				+0.5
1,295,952	-				-0.3
1,295,952	-				+0.2
1,295,952	-				+1.2
1,295,952	-				+0.8
1,295,952	-				-0.5
1,295,952	-				+0.4
1,295,952	-				+0.5
1,295,952	-				-1.9
1,295,952	-				+0.7
1,295,957	+				-0.6
1,295,957	+				+0.5
1,295,958	-				-1.2
1,295,958	-				-1.7
1,295,958	-				+1.4
1,295,987	-				+1.0
1,296,030	+				-1.7
1,296,030	+				+0.1
1,296,030	+				+0.4
1,296,030	+				+0.7
1,296,030	+				-0.5
1,296,030	+				+0.4
1,296,030	+				-0.1
1,296,030	+				-0.4
1,296,031	-				-0.0
1,296,031	-				-1.7
1,296,031	-				-1.0
1,296,035	+				-0.6
1,296,036	-				-1.2
1,296,132	-		EFB2_01247	0.12	+0.3
1,296,132	-		EFB2_01247	0.12	+1.4
1,296,136	+		EFB2_01247	0.13	-0.1
1,296,136	+		EFB2_01247	0.13	-0.3
1,296,136	+		EFB2_01247	0.13	-0.3
1,296,136	+		EFB2_01247	0.13	-0.7
1,296,136	+		EFB2_01247	0.13	-2.2
1,296,136	+		EFB2_01247	0.13	+0.2
1,296,136	+		EFB2_01247	0.13	+0.6
1,296,136	+		EFB2_01247	0.13	-2.3
1,296,136	+		EFB2_01247	0.13	+0.6
1,296,137	-		EFB2_01247	0.13	+0.1
1,296,137	-		EFB2_01247	0.13	-2.0
1,296,137	-		EFB2_01247	0.13	+3.1
1,296,137	-		EFB2_01247	0.13	-0.1
1,296,137	-		EFB2_01247	0.13	-0.2
1,296,137	-		EFB2_01247	0.13	+0.6
1,296,137	-		EFB2_01247	0.13	-0.9
1,296,137	-		EFB2_01247	0.13	-0.7
1,296,137	-		EFB2_01247	0.13	-0.0
1,296,137	-		EFB2_01247	0.13	-1.1
1,296,137	-		EFB2_01247	0.13	+0.8
1,296,137	-		EFB2_01247	0.13	+1.0
1,296,148	+		EFB2_01247	0.14	+0.6
1,296,148	+		EFB2_01247	0.14	+1.7
1,296,148	+		EFB2_01247	0.14	+2.1
1,296,148	+		EFB2_01247	0.14	-0.0
1,296,148	+		EFB2_01247	0.14	-0.4
1,296,148	+		EFB2_01247	0.14	-0.4
1,296,148	+		EFB2_01247	0.14	-0.0
1,296,148	+		EFB2_01247	0.14	-1.0
1,296,148	+		EFB2_01247	0.14	+1.1
1,296,148	+		EFB2_01247	0.14	+1.3
1,296,148	+		EFB2_01247	0.14	+1.5
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