Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03152

Experiment: Wheat Arabinoxylan 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03151 and BACOVA_03152 are separated by 56 nucleotidesBACOVA_03152 and BACOVA_03153 are separated by 346 nucleotides BACOVA_03151: BACOVA_03151 - peptidase, M28 family, at 239,172 to 240,173 _03151 BACOVA_03152: BACOVA_03152 - acetyltransferase, GNAT family, at 240,230 to 240,979 _03152 BACOVA_03153: BACOVA_03153 - SusD family protein, at 241,326 to 243,338 _03153 Position (kb) 240 241Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 239.262 kb on - strandat 239.285 kb on + strand, within BACOVA_03151at 239.288 kb on + strand, within BACOVA_03151at 239.361 kb on + strand, within BACOVA_03151at 239.362 kb on - strand, within BACOVA_03151at 239.362 kb on - strand, within BACOVA_03151at 239.363 kb on + strand, within BACOVA_03151at 239.364 kb on - strand, within BACOVA_03151at 239.378 kb on - strand, within BACOVA_03151at 239.392 kb on + strand, within BACOVA_03151at 239.392 kb on + strand, within BACOVA_03151at 239.412 kb on + strand, within BACOVA_03151at 239.433 kb on + strand, within BACOVA_03151at 239.434 kb on - strand, within BACOVA_03151at 239.485 kb on + strand, within BACOVA_03151at 239.490 kb on - strand, within BACOVA_03151at 239.558 kb on + strand, within BACOVA_03151at 239.568 kb on + strand, within BACOVA_03151at 239.568 kb on + strand, within BACOVA_03151at 239.599 kb on + strand, within BACOVA_03151at 239.600 kb on - strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.633 kb on - strand, within BACOVA_03151at 239.634 kb on + strand, within BACOVA_03151at 239.684 kb on - strand, within BACOVA_03151at 239.775 kb on - strand, within BACOVA_03151at 239.803 kb on + strand, within BACOVA_03151at 239.846 kb on + strand, within BACOVA_03151at 239.886 kb on + strand, within BACOVA_03151at 240.024 kb on - strand, within BACOVA_03151at 240.040 kb on - strand, within BACOVA_03151at 240.044 kb on + strand, within BACOVA_03151at 240.045 kb on - strand, within BACOVA_03151at 240.045 kb on - strand, within BACOVA_03151at 240.113 kb on - strandat 240.122 kb on + strandat 240.263 kb on - strandat 240.298 kb on - strandat 240.302 kb on + strandat 240.353 kb on - strand, within BACOVA_03152at 240.357 kb on - strand, within BACOVA_03152at 240.365 kb on - strand, within BACOVA_03152at 240.396 kb on + strand, within BACOVA_03152at 240.396 kb on + strand, within BACOVA_03152at 240.418 kb on - strand, within BACOVA_03152at 240.421 kb on + strand, within BACOVA_03152at 240.424 kb on - strand, within BACOVA_03152at 240.429 kb on + strand, within BACOVA_03152at 240.429 kb on + strand, within BACOVA_03152at 240.442 kb on + strand, within BACOVA_03152at 240.443 kb on - strand, within BACOVA_03152at 240.443 kb on - strand, within BACOVA_03152at 240.450 kb on + strand, within BACOVA_03152at 240.451 kb on - strand, within BACOVA_03152at 240.637 kb on + strand, within BACOVA_03152at 240.637 kb on + strand, within BACOVA_03152at 240.638 kb on - strand, within BACOVA_03152at 240.638 kb on - strand, within BACOVA_03152at 240.674 kb on + strand, within BACOVA_03152at 240.676 kb on + strand, within BACOVA_03152at 240.676 kb on + strand, within BACOVA_03152at 240.677 kb on - strand, within BACOVA_03152at 240.681 kb on + strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.687 kb on - strand, within BACOVA_03152at 240.687 kb on - strand, within BACOVA_03152at 240.722 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.741 kb on + strand, within BACOVA_03152at 240.741 kb on + strand, within BACOVA_03152at 240.742 kb on - strand, within BACOVA_03152at 240.742 kb on - strand, within BACOVA_03152at 240.747 kb on + strand, within BACOVA_03152at 240.751 kb on - strand, within BACOVA_03152at 240.753 kb on + strand, within BACOVA_03152at 240.754 kb on - strand, within BACOVA_03152at 240.754 kb on - strand, within BACOVA_03152at 240.799 kb on - strand, within BACOVA_03152at 240.799 kb on - strand, within BACOVA_03152at 240.890 kb on - strand, within BACOVA_03152at 240.916 kb on + strandat 240.917 kb on - strandat 240.926 kb on + strandat 240.926 kb on + strandat 240.938 kb on - strandat 240.956 kb on + strandat 240.957 kb on - strandat 240.964 kb on + strandat 240.979 kb on + strandat 240.980 kb on - strandat 240.981 kb on + strandat 240.981 kb on + strandat 240.981 kb on + strandat 240.982 kb on - strandat 240.999 kb on + strandat 241.003 kb on + strandat 241.004 kb on - strandat 241.023 kb on - strandat 241.025 kb on + strandat 241.035 kb on - strandat 241.035 kb on - strandat 241.035 kb on - strandat 241.055 kb on - strandat 241.058 kb on + strandat 241.192 kb on + strandat 241.199 kb on - strandat 241.199 kb on - strandat 241.215 kb on + strandat 241.267 kb on + strandat 241.267 kb on + strandat 241.268 kb on - strandat 241.269 kb on + strandat 241.269 kb on + strandat 241.269 kb on + strandat 241.270 kb on - strandat 241.270 kb on - strandat 241.271 kb on + strandat 241.272 kb on - strandat 241.272 kb on - strandat 241.277 kb on + strandat 241.278 kb on - strandat 241.288 kb on + strandat 241.289 kb on - strandat 241.324 kb on + strandat 241.332 kb on + strandat 241.432 kb on - strandat 241.439 kb on + strandat 241.439 kb on + strandat 241.440 kb on - strandat 241.440 kb on - strandat 241.440 kb on - strandat 241.440 kb on - strandat 241.440 kb on - strandat 241.440 kb on - strandat 241.456 kb on + strandat 241.457 kb on - strandat 241.523 kb on - strandat 241.532 kb on + strand, within BACOVA_03153at 241.532 kb on + strand, within BACOVA_03153at 241.534 kb on + strand, within BACOVA_03153at 241.538 kb on + strand, within BACOVA_03153at 241.538 kb on + strand, within BACOVA_03153at 241.542 kb on + strand, within BACOVA_03153at 241.559 kb on + strand, within BACOVA_03153at 241.559 kb on + strand, within BACOVA_03153at 241.560 kb on - strand, within BACOVA_03153at 241.562 kb on + strand, within BACOVA_03153at 241.563 kb on - strand, within BACOVA_03153at 241.563 kb on - strand, within BACOVA_03153at 241.563 kb on - strand, within BACOVA_03153at 241.588 kb on - strand, within BACOVA_03153at 241.588 kb on - strand, within BACOVA_03153at 241.624 kb on + strand, within BACOVA_03153at 241.625 kb on - strand, within BACOVA_03153at 241.626 kb on + strand, within BACOVA_03153at 241.627 kb on - strand, within BACOVA_03153at 241.627 kb on - strand, within BACOVA_03153at 241.627 kb on - strand, within BACOVA_03153at 241.631 kb on + strand, within BACOVA_03153at 241.632 kb on - strand, within BACOVA_03153at 241.632 kb on - strand, within BACOVA_03153at 241.632 kb on - strand, within BACOVA_03153at 241.632 kb on - strand, within BACOVA_03153at 241.638 kb on + strand, within BACOVA_03153at 241.639 kb on - strand, within BACOVA_03153at 241.745 kb on + strand, within BACOVA_03153at 241.746 kb on - strand, within BACOVA_03153at 241.747 kb on + strand, within BACOVA_03153at 241.747 kb on + strand, within BACOVA_03153at 241.748 kb on - strand, within BACOVA_03153at 241.748 kb on - strand, within BACOVA_03153at 241.780 kb on + strand, within BACOVA_03153at 241.780 kb on + strand, within BACOVA_03153at 241.780 kb on + strand, within BACOVA_03153at 241.781 kb on - strand, within BACOVA_03153at 241.799 kb on + strand, within BACOVA_03153at 241.799 kb on + strand, within BACOVA_03153at 241.835 kb on + strand, within BACOVA_03153at 241.835 kb on + strand, within BACOVA_03153at 241.835 kb on + strand, within BACOVA_03153at 241.836 kb on - strand, within BACOVA_03153at 241.838 kb on + strand, within BACOVA_03153at 241.838 kb on + strand, within BACOVA_03153at 241.921 kb on + strand, within BACOVA_03153

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Per-strain Table

Position Strand Gene LocusTag Fraction Wheat Arabinoxylan 2.5 mg/mL (C)
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239,262 - +0.4
239,285 + BACOVA_03151 0.11 -0.0
239,288 + BACOVA_03151 0.12 +1.8
239,361 + BACOVA_03151 0.19 -2.5
239,362 - BACOVA_03151 0.19 -1.9
239,362 - BACOVA_03151 0.19 +1.3
239,363 + BACOVA_03151 0.19 -0.6
239,364 - BACOVA_03151 0.19 -0.8
239,378 - BACOVA_03151 0.21 +0.5
239,392 + BACOVA_03151 0.22 +0.3
239,392 + BACOVA_03151 0.22 +0.1
239,412 + BACOVA_03151 0.24 +0.4
239,433 + BACOVA_03151 0.26 +0.4
239,434 - BACOVA_03151 0.26 +0.5
239,485 + BACOVA_03151 0.31 +0.1
239,490 - BACOVA_03151 0.32 -0.2
239,558 + BACOVA_03151 0.39 +0.2
239,568 + BACOVA_03151 0.40 +0.3
239,568 + BACOVA_03151 0.40 -0.2
239,599 + BACOVA_03151 0.43 -1.3
239,600 - BACOVA_03151 0.43 -0.5
239,632 + BACOVA_03151 0.46 +0.4
239,632 + BACOVA_03151 0.46 +0.8
239,632 + BACOVA_03151 0.46 -1.1
239,633 - BACOVA_03151 0.46 -1.9
239,634 + BACOVA_03151 0.46 -0.4
239,684 - BACOVA_03151 0.51 -0.2
239,775 - BACOVA_03151 0.60 -0.3
239,803 + BACOVA_03151 0.63 +0.5
239,846 + BACOVA_03151 0.67 -0.4
239,886 + BACOVA_03151 0.71 -0.5
240,024 - BACOVA_03151 0.85 +2.0
240,040 - BACOVA_03151 0.87 -0.3
240,044 + BACOVA_03151 0.87 +1.2
240,045 - BACOVA_03151 0.87 -0.5
240,045 - BACOVA_03151 0.87 +0.5
240,113 - -2.3
240,122 + +1.1
240,263 - +1.2
240,298 - -0.2
240,302 + -1.3
240,353 - BACOVA_03152 0.16 -1.2
240,357 - BACOVA_03152 0.17 +0.5
240,365 - BACOVA_03152 0.18 -0.8
240,396 + BACOVA_03152 0.22 +0.7
240,396 + BACOVA_03152 0.22 -0.2
240,418 - BACOVA_03152 0.25 +2.0
240,421 + BACOVA_03152 0.25 +1.8
240,424 - BACOVA_03152 0.26 +0.3
240,429 + BACOVA_03152 0.27 +0.8
240,429 + BACOVA_03152 0.27 +0.6
240,442 + BACOVA_03152 0.28 +0.2
240,443 - BACOVA_03152 0.28 +1.8
240,443 - BACOVA_03152 0.28 -0.5
240,450 + BACOVA_03152 0.29 +0.4
240,451 - BACOVA_03152 0.29 +1.8
240,637 + BACOVA_03152 0.54 -1.8
240,637 + BACOVA_03152 0.54 +0.9
240,638 - BACOVA_03152 0.54 +0.9
240,638 - BACOVA_03152 0.54 -0.5
240,674 + BACOVA_03152 0.59 -0.0
240,676 + BACOVA_03152 0.59 -1.6
240,676 + BACOVA_03152 0.59 +0.3
240,677 - BACOVA_03152 0.60 +0.1
240,681 + BACOVA_03152 0.60 +1.4
240,682 - BACOVA_03152 0.60 -1.3
240,682 - BACOVA_03152 0.60 -0.5
240,682 - BACOVA_03152 0.60 -0.2
240,687 - BACOVA_03152 0.61 +0.3
240,687 - BACOVA_03152 0.61 -0.0
240,722 - BACOVA_03152 0.66 +0.3
240,726 - BACOVA_03152 0.66 -0.8
240,726 - BACOVA_03152 0.66 +0.4
240,726 - BACOVA_03152 0.66 -2.8
240,741 + BACOVA_03152 0.68 -1.0
240,741 + BACOVA_03152 0.68 +0.4
240,742 - BACOVA_03152 0.68 +0.7
240,742 - BACOVA_03152 0.68 +0.1
240,747 + BACOVA_03152 0.69 -0.6
240,751 - BACOVA_03152 0.69 +0.0
240,753 + BACOVA_03152 0.70 -0.9
240,754 - BACOVA_03152 0.70 -1.1
240,754 - BACOVA_03152 0.70 +0.7
240,799 - BACOVA_03152 0.76 -0.0
240,799 - BACOVA_03152 0.76 -0.9
240,890 - BACOVA_03152 0.88 -0.0
240,916 + -3.2
240,917 - +0.2
240,926 + -1.8
240,926 + -0.9
240,938 - +0.8
240,956 + +0.6
240,957 - +0.6
240,964 + +1.3
240,979 + -1.4
240,980 - +2.0
240,981 + -0.2
240,981 + -0.5
240,981 + -1.8
240,982 - -0.4
240,999 + -1.6
241,003 + -0.2
241,004 - +0.0
241,023 - -1.6
241,025 + +0.1
241,035 - -0.1
241,035 - -0.7
241,035 - -0.6
241,055 - -0.3
241,058 + +0.7
241,192 + -0.6
241,199 - +2.8
241,199 - +0.3
241,215 + -2.5
241,267 + +0.5
241,267 + -0.1
241,268 - +0.2
241,269 + -1.5
241,269 + +0.0
241,269 + -1.9
241,270 - -1.0
241,270 - +0.8
241,271 + -0.8
241,272 - -1.5
241,272 - -0.6
241,277 + -1.1
241,278 - +0.5
241,288 + +0.7
241,289 - +0.6
241,324 + +1.3
241,332 + +0.3
241,432 - +1.0
241,439 + -0.9
241,439 + +0.7
241,440 - +0.7
241,440 - +0.6
241,440 - -1.2
241,440 - -0.0
241,440 - -1.8
241,440 - +1.4
241,456 + -0.0
241,457 - -0.5
241,523 - +2.8
241,532 + BACOVA_03153 0.10 +0.0
241,532 + BACOVA_03153 0.10 -1.0
241,534 + BACOVA_03153 0.10 -0.5
241,538 + BACOVA_03153 0.11 -0.2
241,538 + BACOVA_03153 0.11 -0.3
241,542 + BACOVA_03153 0.11 -0.2
241,559 + BACOVA_03153 0.12 -0.0
241,559 + BACOVA_03153 0.12 +1.0
241,560 - BACOVA_03153 0.12 +0.1
241,562 + BACOVA_03153 0.12 -0.6
241,563 - BACOVA_03153 0.12 -0.0
241,563 - BACOVA_03153 0.12 -0.7
241,563 - BACOVA_03153 0.12 +0.6
241,588 - BACOVA_03153 0.13 +0.8
241,588 - BACOVA_03153 0.13 -0.5
241,624 + BACOVA_03153 0.15 +1.7
241,625 - BACOVA_03153 0.15 +0.3
241,626 + BACOVA_03153 0.15 +0.6
241,627 - BACOVA_03153 0.15 +1.5
241,627 - BACOVA_03153 0.15 +0.7
241,627 - BACOVA_03153 0.15 +0.7
241,631 + BACOVA_03153 0.15 +0.0
241,632 - BACOVA_03153 0.15 -0.7
241,632 - BACOVA_03153 0.15 -2.8
241,632 - BACOVA_03153 0.15 +1.0
241,632 - BACOVA_03153 0.15 +0.9
241,638 + BACOVA_03153 0.15 -0.1
241,639 - BACOVA_03153 0.16 +1.6
241,745 + BACOVA_03153 0.21 -1.2
241,746 - BACOVA_03153 0.21 -1.0
241,747 + BACOVA_03153 0.21 -0.2
241,747 + BACOVA_03153 0.21 -1.3
241,748 - BACOVA_03153 0.21 +1.1
241,748 - BACOVA_03153 0.21 +0.2
241,780 + BACOVA_03153 0.23 +1.0
241,780 + BACOVA_03153 0.23 -0.0
241,780 + BACOVA_03153 0.23 +0.6
241,781 - BACOVA_03153 0.23 +0.3
241,799 + BACOVA_03153 0.23 +0.3
241,799 + BACOVA_03153 0.23 -0.6
241,835 + BACOVA_03153 0.25 +1.2
241,835 + BACOVA_03153 0.25 +0.2
241,835 + BACOVA_03153 0.25 +1.1
241,836 - BACOVA_03153 0.25 +0.7
241,838 + BACOVA_03153 0.25 -1.0
241,838 + BACOVA_03153 0.25 -1.9
241,921 + BACOVA_03153 0.30 +0.2

Or see this region's nucleotide sequence