Experiment: Wheat Arabinoxylan 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02607 and BACOVA_02608 are separated by 172 nucleotides BACOVA_02608 and BACOVA_02609 are separated by 63 nucleotides BACOVA_02609 and BACOVA_02610 are separated by 23 nucleotides
BACOVA_02607: BACOVA_02607 - RND transporter, HAE1 family, at 375,070 to 378,219
_02607
BACOVA_02608: BACOVA_02608 - hypothetical protein, at 378,392 to 378,841
_02608
BACOVA_02609: BACOVA_02609 - putative AMP nucleosidase, at 378,905 to 379,681
_02609
BACOVA_02610: BACOVA_02610 - DNA polymerase III, delta subunit, at 379,705 to 380,724
_02610
Position (kb) 378
379 Strain fitness (log2 ratio) -2
-1
0
1 at 377.429 kb on + strand, within BACOVA_02607 at 377.429 kb on + strand, within BACOVA_02607 at 377.523 kb on + strand, within BACOVA_02607 at 377.523 kb on + strand, within BACOVA_02607 at 377.523 kb on + strand, within BACOVA_02607 at 377.527 kb on + strand, within BACOVA_02607 at 377.571 kb on + strand, within BACOVA_02607 at 377.679 kb on + strand, within BACOVA_02607 at 377.679 kb on + strand, within BACOVA_02607 at 377.740 kb on + strand, within BACOVA_02607 at 377.792 kb on + strand, within BACOVA_02607 at 377.795 kb on + strand, within BACOVA_02607 at 377.856 kb on + strand, within BACOVA_02607 at 377.856 kb on + strand, within BACOVA_02607 at 377.934 kb on + strand at 377.943 kb on + strand at 378.011 kb on + strand at 378.032 kb on + strand at 378.065 kb on + strand at 378.065 kb on + strand at 378.263 kb on + strand at 378.296 kb on + strand at 378.299 kb on + strand at 378.316 kb on + strand at 378.343 kb on + strand at 378.343 kb on + strand at 378.355 kb on + strand at 378.432 kb on + strand at 378.500 kb on + strand, within BACOVA_02608 at 378.509 kb on + strand, within BACOVA_02608 at 378.559 kb on + strand, within BACOVA_02608 at 378.634 kb on + strand, within BACOVA_02608 at 378.753 kb on + strand, within BACOVA_02608 at 378.818 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Wheat Arabinoxylan 2.5 mg/mL (C) remove 377,429 + BACOVA_02607 0.75 -0.2 377,429 + BACOVA_02607 0.75 +0.3 377,523 + BACOVA_02607 0.78 +0.1 377,523 + BACOVA_02607 0.78 +0.5 377,523 + BACOVA_02607 0.78 -0.7 377,527 + BACOVA_02607 0.78 +0.8 377,571 + BACOVA_02607 0.79 -0.5 377,679 + BACOVA_02607 0.83 +0.6 377,679 + BACOVA_02607 0.83 -0.5 377,740 + BACOVA_02607 0.85 +0.0 377,792 + BACOVA_02607 0.86 +0.1 377,795 + BACOVA_02607 0.87 -1.3 377,856 + BACOVA_02607 0.88 -0.1 377,856 + BACOVA_02607 0.88 +0.5 377,934 + +0.3 377,943 + -0.1 378,011 + -0.7 378,032 + -0.8 378,065 + -2.1 378,065 + -0.7 378,263 + -0.2 378,296 + -0.2 378,299 + -0.4 378,316 + -0.9 378,343 + -1.2 378,343 + -1.5 378,355 + -1.0 378,432 + -0.1 378,500 + BACOVA_02608 0.24 -0.2 378,509 + BACOVA_02608 0.26 -1.9 378,559 + BACOVA_02608 0.37 -0.7 378,634 + BACOVA_02608 0.54 -2.3 378,753 + BACOVA_02608 0.80 -1.1 378,818 + -0.8
Or see this region's nucleotide sequence