Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF960 and GFF961 overlap by 1 nucleotides GFF961 and GFF962 are separated by 14 nucleotides GFF962 and GFF963 overlap by 4 nucleotides
GFF960 - Putative tyrosine-protein kinase YveL, at 293,924 to 294,571
GFF960
GFF961 - hypothetical protein, at 294,571 to 295,317
GFF961
GFF962 - UDP-glucose 4-epimerase, at 295,332 to 296,366
GFF962
GFF963 - UDP-glucose 6-dehydrogenase, at 296,363 to 297,715
GFF963
Position (kb) 295
296
297 Strain fitness (log2 ratio) -2
-1
0
1 at 294.554 kb on - strand at 294.554 kb on - strand at 294.572 kb on + strand at 294.572 kb on + strand at 294.572 kb on + strand at 294.657 kb on - strand, within GFF961 at 294.737 kb on + strand, within GFF961 at 294.771 kb on - strand, within GFF961 at 294.771 kb on - strand, within GFF961 at 295.366 kb on + strand at 295.366 kb on - strand at 295.369 kb on + strand at 295.416 kb on + strand at 295.705 kb on + strand, within GFF962 at 295.706 kb on - strand, within GFF962 at 295.733 kb on - strand, within GFF962 at 295.868 kb on - strand, within GFF962 at 295.993 kb on + strand, within GFF962 at 295.994 kb on - strand, within GFF962 at 295.994 kb on - strand, within GFF962 at 296.257 kb on + strand, within GFF962 at 296.258 kb on - strand, within GFF962 at 296.260 kb on + strand, within GFF962 at 296.260 kb on + strand, within GFF962 at 296.412 kb on + strand at 296.412 kb on + strand at 296.413 kb on - strand at 296.449 kb on - strand at 296.613 kb on + strand, within GFF963 at 296.613 kb on + strand, within GFF963 at 296.614 kb on - strand, within GFF963 at 296.614 kb on - strand, within GFF963 at 296.649 kb on + strand, within GFF963 at 296.650 kb on - strand, within GFF963 at 297.081 kb on + strand, within GFF963 at 297.150 kb on + strand, within GFF963 at 297.151 kb on - strand, within GFF963
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 294,554 - -0.8 294,554 - +0.1 294,572 + +0.2 294,572 + -2.0 294,572 + -2.3 294,657 - GFF961 0.12 +0.9 294,737 + GFF961 0.22 -0.9 294,771 - GFF961 0.27 -0.2 294,771 - GFF961 0.27 +0.0 295,366 + -0.1 295,366 - -0.1 295,369 + +0.6 295,416 + -0.3 295,705 + GFF962 0.36 +0.0 295,706 - GFF962 0.36 +0.5 295,733 - GFF962 0.39 -1.1 295,868 - GFF962 0.52 +0.2 295,993 + GFF962 0.64 +0.6 295,994 - GFF962 0.64 -0.9 295,994 - GFF962 0.64 -0.2 296,257 + GFF962 0.89 -0.3 296,258 - GFF962 0.89 +0.7 296,260 + GFF962 0.90 -0.6 296,260 + GFF962 0.90 +0.4 296,412 + +1.7 296,412 + +0.3 296,413 - -1.0 296,449 - -0.3 296,613 + GFF963 0.18 +0.8 296,613 + GFF963 0.18 -0.6 296,614 - GFF963 0.19 -0.3 296,614 - GFF963 0.19 +0.5 296,649 + GFF963 0.21 -0.8 296,650 - GFF963 0.21 +0.1 297,081 + GFF963 0.53 -0.2 297,150 + GFF963 0.58 +0.6 297,151 - GFF963 0.58 -0.2
Or see this region's nucleotide sequence