Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2092 and GFF2093 are separated by 66 nucleotides GFF2093 and GFF2094 overlap by 4 nucleotides GFF2094 and GFF2095 are separated by 130 nucleotides GFF2095 and GFF2096 overlap by 4 nucleotides
GFF2092 - hypothetical protein, at 341,192 to 342,688
GFF2092
GFF2093 - hypothetical protein, at 342,755 to 343,102
GFF2093
GFF2094 - hypothetical protein, at 343,099 to 343,395
GFF2094
GFF2095 - hypothetical protein, at 343,526 to 345,292
GFF2095
GFF2096 - hypothetical protein, at 345,289 to 346,524
GFF2096
Position (kb) 343
344
345
346 Strain fitness (log2 ratio) -1
0
1 at 342.620 kb on + strand at 342.620 kb on + strand at 342.621 kb on - strand at 342.671 kb on + strand at 342.735 kb on + strand at 342.782 kb on + strand at 342.782 kb on + strand at 342.782 kb on + strand at 342.782 kb on + strand at 342.783 kb on - strand at 342.875 kb on + strand, within GFF2093 at 342.875 kb on + strand, within GFF2093 at 342.875 kb on + strand, within GFF2093 at 342.876 kb on - strand, within GFF2093 at 342.964 kb on + strand, within GFF2093 at 342.965 kb on - strand, within GFF2093 at 343.001 kb on + strand, within GFF2093 at 343.001 kb on + strand, within GFF2093 at 343.002 kb on - strand, within GFF2093 at 343.124 kb on + strand at 343.124 kb on + strand at 343.124 kb on + strand at 343.125 kb on - strand at 343.125 kb on - strand at 343.213 kb on + strand, within GFF2094 at 343.267 kb on + strand, within GFF2094 at 343.267 kb on + strand, within GFF2094 at 343.267 kb on + strand, within GFF2094 at 343.268 kb on - strand, within GFF2094 at 343.268 kb on - strand, within GFF2094 at 343.268 kb on - strand, within GFF2094 at 343.408 kb on - strand at 343.408 kb on - strand at 343.627 kb on + strand at 343.808 kb on - strand, within GFF2095 at 344.205 kb on + strand, within GFF2095 at 344.206 kb on - strand, within GFF2095 at 344.479 kb on + strand, within GFF2095 at 344.480 kb on - strand, within GFF2095 at 344.545 kb on - strand, within GFF2095 at 345.148 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 342,620 + +0.5 342,620 + +0.5 342,621 - +0.6 342,671 + -0.7 342,735 + +0.2 342,782 + -0.3 342,782 + +0.1 342,782 + -0.6 342,782 + +1.2 342,783 - -0.7 342,875 + GFF2093 0.34 -0.1 342,875 + GFF2093 0.34 -0.0 342,875 + GFF2093 0.34 +1.4 342,876 - GFF2093 0.35 -0.6 342,964 + GFF2093 0.60 -0.2 342,965 - GFF2093 0.60 +0.3 343,001 + GFF2093 0.71 -0.9 343,001 + GFF2093 0.71 -0.9 343,002 - GFF2093 0.71 +0.1 343,124 + +0.8 343,124 + -0.2 343,124 + -1.0 343,125 - -0.7 343,125 - -0.6 343,213 + GFF2094 0.38 -0.2 343,267 + GFF2094 0.57 -1.1 343,267 + GFF2094 0.57 +0.7 343,267 + GFF2094 0.57 -0.1 343,268 - GFF2094 0.57 -0.1 343,268 - GFF2094 0.57 +0.6 343,268 - GFF2094 0.57 +0.5 343,408 - +0.5 343,408 - +1.6 343,627 + +0.1 343,808 - GFF2095 0.16 -0.4 344,205 + GFF2095 0.38 -0.5 344,206 - GFF2095 0.38 -0.4 344,479 + GFF2095 0.54 +0.3 344,480 - GFF2095 0.54 -1.6 344,545 - GFF2095 0.58 -0.8 345,148 + +0.4
Or see this region's nucleotide sequence