Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1781 and GFF1782 are separated by 140 nucleotides GFF1782 and GFF1783 are separated by 323 nucleotides
GFF1781 - Methyl-accepting chemotaxis protein McpA, at 581,137 to 583,083
GFF1781
GFF1782 - Flavin-dependent monooxygenase, reductase subunit HsaB, at 583,224 to 583,709
GFF1782
GFF1783 - hypothetical protein, at 584,033 to 585,439
GFF1783
Position (kb) 583
584 Strain fitness (log2 ratio) -2
-1
0
1 at 582.492 kb on + strand, within GFF1781 at 582.492 kb on + strand, within GFF1781 at 582.493 kb on - strand, within GFF1781 at 582.768 kb on + strand, within GFF1781 at 583.157 kb on + strand at 583.157 kb on + strand at 583.157 kb on + strand at 583.158 kb on - strand at 583.264 kb on + strand at 583.264 kb on + strand at 583.264 kb on + strand at 583.264 kb on + strand at 583.264 kb on + strand at 583.264 kb on + strand at 583.345 kb on + strand, within GFF1782 at 583.345 kb on + strand, within GFF1782 at 583.345 kb on + strand, within GFF1782 at 583.346 kb on - strand, within GFF1782 at 583.346 kb on - strand, within GFF1782 at 583.465 kb on + strand, within GFF1782 at 583.466 kb on - strand, within GFF1782 at 583.534 kb on + strand, within GFF1782 at 583.549 kb on + strand, within GFF1782 at 583.549 kb on + strand, within GFF1782 at 583.550 kb on - strand, within GFF1782 at 583.550 kb on - strand, within GFF1782 at 583.550 kb on - strand, within GFF1782 at 583.550 kb on - strand, within GFF1782 at 583.650 kb on - strand, within GFF1782 at 583.690 kb on + strand at 583.690 kb on + strand at 583.691 kb on - strand at 583.997 kb on - strand at 583.997 kb on - strand at 583.997 kb on - strand at 584.005 kb on - strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.032 kb on + strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.033 kb on - strand at 584.074 kb on + strand at 584.074 kb on + strand at 584.074 kb on + strand at 584.084 kb on + strand at 584.085 kb on - strand at 584.242 kb on + strand, within GFF1783 at 584.242 kb on + strand, within GFF1783 at 584.242 kb on + strand, within GFF1783 at 584.243 kb on - strand, within GFF1783 at 584.243 kb on - strand, within GFF1783 at 584.376 kb on - strand, within GFF1783 at 584.376 kb on - strand, within GFF1783 at 584.504 kb on + strand, within GFF1783 at 584.518 kb on + strand, within GFF1783 at 584.518 kb on + strand, within GFF1783 at 584.519 kb on - strand, within GFF1783 at 584.577 kb on - strand, within GFF1783 at 584.577 kb on - strand, within GFF1783 at 584.577 kb on - strand, within GFF1783 at 584.577 kb on - strand, within GFF1783 at 584.690 kb on + strand, within GFF1783 at 584.690 kb on + strand, within GFF1783 at 584.691 kb on - strand, within GFF1783 at 584.691 kb on - strand, within GFF1783 at 584.691 kb on - strand, within GFF1783 at 584.691 kb on - strand, within GFF1783 at 584.702 kb on + strand, within GFF1783
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 582,492 + GFF1781 0.70 -0.4 582,492 + GFF1781 0.70 +0.1 582,493 - GFF1781 0.70 -0.5 582,768 + GFF1781 0.84 -1.0 583,157 + -0.2 583,157 + -0.2 583,157 + -1.1 583,158 - +0.1 583,264 + -0.7 583,264 + -0.4 583,264 + -1.4 583,264 + +1.3 583,264 + -1.0 583,264 + +0.9 583,345 + GFF1782 0.25 -0.1 583,345 + GFF1782 0.25 +0.2 583,345 + GFF1782 0.25 +0.9 583,346 - GFF1782 0.25 -0.5 583,346 - GFF1782 0.25 +0.1 583,465 + GFF1782 0.50 -0.5 583,466 - GFF1782 0.50 +0.7 583,534 + GFF1782 0.64 -0.2 583,549 + GFF1782 0.67 +1.0 583,549 + GFF1782 0.67 -0.5 583,550 - GFF1782 0.67 -0.3 583,550 - GFF1782 0.67 -0.4 583,550 - GFF1782 0.67 +0.2 583,550 - GFF1782 0.67 +1.0 583,650 - GFF1782 0.88 +0.4 583,690 + +1.3 583,690 + -0.3 583,691 - +0.2 583,997 - -1.7 583,997 - -0.5 583,997 - -0.3 584,005 - +0.8 584,032 + -1.0 584,032 + +0.1 584,032 + -0.4 584,032 + -0.9 584,032 + -0.4 584,032 + -0.8 584,032 + +0.1 584,032 + +1.3 584,032 + +0.1 584,033 - -0.3 584,033 - +1.3 584,033 - +0.5 584,033 - -0.2 584,033 - +0.1 584,033 - -0.7 584,033 - -0.5 584,033 - -0.4 584,074 + +0.2 584,074 + -0.7 584,074 + +0.8 584,084 + -0.0 584,085 - +0.6 584,242 + GFF1783 0.15 +0.7 584,242 + GFF1783 0.15 -0.7 584,242 + GFF1783 0.15 -1.5 584,243 - GFF1783 0.15 -0.6 584,243 - GFF1783 0.15 +1.7 584,376 - GFF1783 0.24 -1.2 584,376 - GFF1783 0.24 -1.0 584,504 + GFF1783 0.33 -1.3 584,518 + GFF1783 0.34 +0.0 584,518 + GFF1783 0.34 +0.3 584,519 - GFF1783 0.35 -0.1 584,577 - GFF1783 0.39 +0.5 584,577 - GFF1783 0.39 +0.4 584,577 - GFF1783 0.39 -0.1 584,577 - GFF1783 0.39 +0.3 584,690 + GFF1783 0.47 +0.3 584,690 + GFF1783 0.47 -2.6 584,691 - GFF1783 0.47 +0.5 584,691 - GFF1783 0.47 -0.6 584,691 - GFF1783 0.47 -0.3 584,691 - GFF1783 0.47 -0.4 584,702 + GFF1783 0.48 -1.0
Or see this region's nucleotide sequence