Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1229 and GFF1230 overlap by 4 nucleotides GFF1230 and GFF1231 are separated by 17 nucleotides
GFF1229 - Apulose-4-phosphate transketolase subunit B, at 583,210 to 584,238
GFF1229
GFF1230 - Apulose-4-phosphate transketolase subunit A, at 584,235 to 585,083
GFF1230
GFF1231 - Putative metabolite transport protein NicT, at 585,101 to 586,399
GFF1231
Position (kb) 584
585
586 Strain fitness (log2 ratio) -2
-1
0
1
2 at 583.259 kb on + strand at 583.570 kb on + strand, within GFF1229 at 583.570 kb on + strand, within GFF1229 at 583.570 kb on + strand, within GFF1229 at 583.570 kb on + strand, within GFF1229 at 583.571 kb on - strand, within GFF1229 at 583.571 kb on - strand, within GFF1229 at 583.625 kb on + strand, within GFF1229 at 583.626 kb on - strand, within GFF1229 at 583.670 kb on + strand, within GFF1229 at 583.670 kb on + strand, within GFF1229 at 583.671 kb on - strand, within GFF1229 at 583.671 kb on - strand, within GFF1229 at 583.671 kb on - strand, within GFF1229 at 583.887 kb on - strand, within GFF1229 at 583.913 kb on + strand, within GFF1229 at 583.913 kb on + strand, within GFF1229 at 583.914 kb on - strand, within GFF1229 at 583.914 kb on - strand, within GFF1229 at 583.917 kb on + strand, within GFF1229 at 583.918 kb on - strand, within GFF1229 at 583.918 kb on - strand, within GFF1229 at 584.043 kb on - strand, within GFF1229 at 584.043 kb on - strand, within GFF1229 at 584.043 kb on - strand, within GFF1229 at 584.043 kb on - strand, within GFF1229 at 584.203 kb on - strand at 584.203 kb on - strand at 584.641 kb on + strand, within GFF1230 at 584.747 kb on - strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.791 kb on + strand, within GFF1230 at 584.792 kb on - strand, within GFF1230 at 584.792 kb on - strand, within GFF1230 at 584.842 kb on + strand, within GFF1230 at 584.843 kb on - strand, within GFF1230 at 584.857 kb on + strand, within GFF1230 at 584.857 kb on + strand, within GFF1230 at 584.858 kb on - strand, within GFF1230 at 584.875 kb on + strand, within GFF1230 at 584.875 kb on + strand, within GFF1230 at 584.875 kb on + strand, within GFF1230 at 584.875 kb on + strand, within GFF1230 at 584.875 kb on + strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.876 kb on - strand, within GFF1230 at 584.935 kb on + strand, within GFF1230 at 584.936 kb on - strand, within GFF1230 at 584.936 kb on - strand, within GFF1230 at 584.980 kb on + strand, within GFF1230 at 584.980 kb on + strand, within GFF1230 at 584.981 kb on - strand, within GFF1230 at 585.075 kb on - strand at 585.075 kb on - strand at 585.128 kb on - strand at 585.158 kb on + strand at 585.158 kb on + strand at 585.159 kb on - strand at 585.159 kb on - strand at 585.174 kb on + strand at 585.174 kb on + strand at 585.174 kb on + strand at 585.174 kb on + strand at 585.174 kb on + strand at 585.175 kb on - strand at 585.175 kb on - strand at 585.175 kb on - strand at 585.225 kb on + strand at 585.522 kb on + strand, within GFF1231 at 585.522 kb on + strand, within GFF1231 at 585.634 kb on - strand, within GFF1231 at 585.634 kb on - strand, within GFF1231 at 585.634 kb on - strand, within GFF1231 at 585.790 kb on - strand, within GFF1231 at 585.790 kb on - strand, within GFF1231 at 585.790 kb on - strand, within GFF1231 at 585.940 kb on + strand, within GFF1231 at 585.941 kb on - strand, within GFF1231 at 585.987 kb on + strand, within GFF1231 at 585.988 kb on - strand, within GFF1231 at 585.988 kb on - strand, within GFF1231 at 585.988 kb on - strand, within GFF1231 at 585.988 kb on - strand, within GFF1231 at 585.996 kb on + strand, within GFF1231 at 585.996 kb on + strand, within GFF1231 at 585.997 kb on - strand, within GFF1231 at 585.997 kb on - strand, within GFF1231 at 585.997 kb on - strand, within GFF1231 at 585.997 kb on - strand, within GFF1231 at 586.056 kb on + strand, within GFF1231 at 586.056 kb on + strand, within GFF1231
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 583,259 + +0.3 583,570 + GFF1229 0.35 -0.2 583,570 + GFF1229 0.35 +0.0 583,570 + GFF1229 0.35 +0.3 583,570 + GFF1229 0.35 +0.2 583,571 - GFF1229 0.35 -1.8 583,571 - GFF1229 0.35 -0.5 583,625 + GFF1229 0.40 +0.6 583,626 - GFF1229 0.40 +0.7 583,670 + GFF1229 0.45 -0.1 583,670 + GFF1229 0.45 +0.0 583,671 - GFF1229 0.45 -0.8 583,671 - GFF1229 0.45 -0.3 583,671 - GFF1229 0.45 +0.5 583,887 - GFF1229 0.66 +0.7 583,913 + GFF1229 0.68 +1.7 583,913 + GFF1229 0.68 -0.1 583,914 - GFF1229 0.68 +0.4 583,914 - GFF1229 0.68 -0.0 583,917 + GFF1229 0.69 +1.1 583,918 - GFF1229 0.69 -1.0 583,918 - GFF1229 0.69 +0.6 584,043 - GFF1229 0.81 +0.7 584,043 - GFF1229 0.81 +0.6 584,043 - GFF1229 0.81 -2.6 584,043 - GFF1229 0.81 -1.6 584,203 - +1.0 584,203 - +0.3 584,641 + GFF1230 0.48 +1.0 584,747 - GFF1230 0.60 -0.7 584,791 + GFF1230 0.65 +0.0 584,791 + GFF1230 0.65 +0.4 584,791 + GFF1230 0.65 +0.1 584,791 + GFF1230 0.65 +2.3 584,791 + GFF1230 0.65 +0.4 584,791 + GFF1230 0.65 -1.0 584,792 - GFF1230 0.66 +0.2 584,792 - GFF1230 0.66 -0.3 584,842 + GFF1230 0.71 +0.2 584,843 - GFF1230 0.72 +0.2 584,857 + GFF1230 0.73 +0.1 584,857 + GFF1230 0.73 -0.3 584,858 - GFF1230 0.73 -0.5 584,875 + GFF1230 0.75 -0.2 584,875 + GFF1230 0.75 +0.6 584,875 + GFF1230 0.75 -0.3 584,875 + GFF1230 0.75 -0.7 584,875 + GFF1230 0.75 +1.2 584,876 - GFF1230 0.76 -0.7 584,876 - GFF1230 0.76 -1.2 584,876 - GFF1230 0.76 -0.7 584,876 - GFF1230 0.76 -1.0 584,876 - GFF1230 0.76 +0.5 584,876 - GFF1230 0.76 -0.1 584,876 - GFF1230 0.76 -0.4 584,935 + GFF1230 0.82 +0.2 584,936 - GFF1230 0.83 +0.2 584,936 - GFF1230 0.83 -1.0 584,980 + GFF1230 0.88 +0.3 584,980 + GFF1230 0.88 -1.0 584,981 - GFF1230 0.88 -0.1 585,075 - -0.6 585,075 - +0.4 585,128 - -0.9 585,158 + -0.2 585,158 + +1.3 585,159 - +0.5 585,159 - +0.4 585,174 + -0.1 585,174 + -0.2 585,174 + -0.1 585,174 + +0.2 585,174 + -0.9 585,175 - -0.7 585,175 - +0.2 585,175 - -0.2 585,225 + +0.0 585,522 + GFF1231 0.32 -1.2 585,522 + GFF1231 0.32 -0.1 585,634 - GFF1231 0.41 -0.1 585,634 - GFF1231 0.41 +0.1 585,634 - GFF1231 0.41 -0.1 585,790 - GFF1231 0.53 +0.4 585,790 - GFF1231 0.53 +0.2 585,790 - GFF1231 0.53 +0.4 585,940 + GFF1231 0.65 +1.0 585,941 - GFF1231 0.65 -1.1 585,987 + GFF1231 0.68 +0.5 585,988 - GFF1231 0.68 -1.7 585,988 - GFF1231 0.68 +0.1 585,988 - GFF1231 0.68 -0.8 585,988 - GFF1231 0.68 +0.0 585,996 + GFF1231 0.69 -0.2 585,996 + GFF1231 0.69 +1.7 585,997 - GFF1231 0.69 -0.4 585,997 - GFF1231 0.69 -0.1 585,997 - GFF1231 0.69 -0.1 585,997 - GFF1231 0.69 -1.3 586,056 + GFF1231 0.74 -0.4 586,056 + GFF1231 0.74 -0.3
Or see this region's nucleotide sequence