Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_10840

Experiment: Time0_primer_test

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_primer_test
11,038	+		HUW76_10830	0.37	-0.4
11,038	+		HUW76_10830	0.37	+0.9
11,039	-		HUW76_10830	0.38	-0.5
11,047	-		HUW76_10830	0.41	-0.5
11,047	-		HUW76_10830	0.41	+0.7
11,047	-		HUW76_10830	0.41	+0.3
11,084	-		HUW76_10830	0.58	-0.8
11,085	+		HUW76_10830	0.59	+1.5
11,086	+		HUW76_10830	0.59	-0.2
11,093	-		HUW76_10830	0.62	+0.5
11,093	-		HUW76_10830	0.62	+0.2
11,105	-		HUW76_10830	0.68	+1.2
11,105	-		HUW76_10830	0.68	+0.3
11,115	-		HUW76_10830	0.72	+0.0
11,115	-		HUW76_10830	0.72	-0.3
11,116	+		HUW76_10830	0.73	+0.8
11,124	-		HUW76_10830	0.76	+1.9
11,124	-		HUW76_10830	0.76	-0.2
11,124	-		HUW76_10830	0.76	-0.5
11,144	-		HUW76_10830	0.85	+0.1
11,166	+				-0.4
11,166	-				-0.1
11,174	-				-0.4
11,220	-				-0.5
11,220	-				+0.3
11,220	-				-0.2
11,295	-				+0.1
11,295	-				-0.1
11,335	-				+0.4
11,337	-				-0.9
11,338	+				+1.4
11,348	-				-0.2
11,351	+				-0.7
11,356	+				-0.1
11,358	-				-0.6
11,358	-				+0.3
11,359	-				-0.5
11,359	-				-0.1
11,359	-				-0.3
11,364	-				+0.3
11,372	+				-0.6
11,372	+				-0.2
11,394	+		HUW76_10835	0.12	+1.6
11,418	+		HUW76_10835	0.16	-0.4
11,418	+		HUW76_10835	0.16	-0.7
11,420	+		HUW76_10835	0.16	+0.4
11,422	+		HUW76_10835	0.16	+0.8
11,426	-		HUW76_10835	0.17	-0.2
11,430	-		HUW76_10835	0.18	+0.1
11,446	-		HUW76_10835	0.20	+0.6
11,446	-		HUW76_10835	0.20	+0.4
11,446	-		HUW76_10835	0.20	+0.3
11,446	-		HUW76_10835	0.20	-0.4
11,446	-		HUW76_10835	0.20	+0.6
11,450	+		HUW76_10835	0.21	+2.4
11,450	+		HUW76_10835	0.21	-0.4
11,458	-		HUW76_10835	0.22	-0.1
11,458	-		HUW76_10835	0.22	+0.3
11,458	-		HUW76_10835	0.22	-0.2
11,465	-		HUW76_10835	0.23	+0.1
11,465	-		HUW76_10835	0.23	+1.3
11,485	-		HUW76_10835	0.26	+0.2
11,485	-		HUW76_10835	0.26	+0.0
11,490	+		HUW76_10835	0.27	+0.4
11,490	+		HUW76_10835	0.27	+0.0
11,490	+		HUW76_10835	0.27	-0.6
11,498	-		HUW76_10835	0.28	-0.7
11,498	-		HUW76_10835	0.28	-1.2
11,498	-		HUW76_10835	0.28	-0.1
11,498	-		HUW76_10835	0.28	+0.4
11,500	+		HUW76_10835	0.29	-0.1
11,508	-		HUW76_10835	0.30	+0.5
11,508	-		HUW76_10835	0.30	+0.6
11,510	+		HUW76_10835	0.30	+0.8
11,510	+		HUW76_10835	0.30	-0.8
11,510	+		HUW76_10835	0.30	-0.1
11,510	+		HUW76_10835	0.30	+1.8
11,511	+		HUW76_10835	0.30	+0.2
11,518	-		HUW76_10835	0.32	+0.3
11,518	-		HUW76_10835	0.32	-0.3
11,518	-		HUW76_10835	0.32	-1.0
11,518	-		HUW76_10835	0.32	+0.1
11,518	-		HUW76_10835	0.32	+0.0
11,518	-		HUW76_10835	0.32	-0.4
11,518	-		HUW76_10835	0.32	+0.3
11,518	-		HUW76_10835	0.32	-0.5
11,518	-		HUW76_10835	0.32	-0.7
11,518	-		HUW76_10835	0.32	-0.2
11,518	-		HUW76_10835	0.32	+1.2
11,529	-		HUW76_10835	0.33	-0.1
11,530	-		HUW76_10835	0.33	-0.6
11,530	-		HUW76_10835	0.33	+0.7
11,531	+		HUW76_10835	0.34	-0.0
11,531	+		HUW76_10835	0.34	+0.0
11,545	-		HUW76_10835	0.36	+0.3
11,582	-		HUW76_10835	0.42	+0.2
11,582	-		HUW76_10835	0.42	-0.0
11,585	+		HUW76_10835	0.42	-0.8
11,595	+		HUW76_10835	0.44	-1.2
11,609	+		HUW76_10835	0.46	-0.8
11,619	+		HUW76_10835	0.48	+0.3
11,648	-		HUW76_10835	0.52	-2.4
11,652	+		HUW76_10835	0.53	+0.8
11,661	-		HUW76_10835	0.54	-0.6
11,661	-		HUW76_10835	0.54	-0.7
11,690	+		HUW76_10835	0.59	-0.4
11,698	-		HUW76_10835	0.60	-0.3
11,698	-		HUW76_10835	0.60	+0.9
11,698	-		HUW76_10835	0.60	-1.0
11,698	-		HUW76_10835	0.60	+0.1
11,711	+		HUW76_10835	0.62	-0.1
11,711	+		HUW76_10835	0.62	-1.2
11,711	+		HUW76_10835	0.62	-1.9
11,711	+		HUW76_10835	0.62	-0.3
11,711	+		HUW76_10835	0.62	-0.6
11,711	+		HUW76_10835	0.62	+1.0
11,711	+		HUW76_10835	0.62	+0.7
11,711	+		HUW76_10835	0.62	+0.0
11,711	+		HUW76_10835	0.62	+1.4
11,711	+		HUW76_10835	0.62	-0.4
11,711	+		HUW76_10835	0.62	+0.5
11,711	+		HUW76_10835	0.62	+0.4
11,711	+		HUW76_10835	0.62	-0.2
11,711	+		HUW76_10835	0.62	+0.8
11,711	+		HUW76_10835	0.62	-0.2
11,711	+		HUW76_10835	0.62	+0.8
11,711	+		HUW76_10835	0.62	+0.8
11,714	-		HUW76_10835	0.63	+0.9
11,719	-		HUW76_10835	0.63	-0.5
11,719	-		HUW76_10835	0.63	-2.2
11,719	-		HUW76_10835	0.63	+0.2
11,719	-		HUW76_10835	0.63	+0.3
11,719	-		HUW76_10835	0.63	+0.3
11,719	-		HUW76_10835	0.63	-0.6
11,719	-		HUW76_10835	0.63	-0.0
11,719	-		HUW76_10835	0.63	+0.8
11,719	-		HUW76_10835	0.63	-0.2
11,719	-		HUW76_10835	0.63	+0.8
11,719	-		HUW76_10835	0.63	+1.0
11,719	-		HUW76_10835	0.63	+0.9
11,719	-		HUW76_10835	0.63	-0.5
11,719	-		HUW76_10835	0.63	+0.0
11,719	-		HUW76_10835	0.63	-0.2
11,719	-		HUW76_10835	0.63	+0.0
11,719	-		HUW76_10835	0.63	+2.6
11,719	-		HUW76_10835	0.63	+0.5
11,719	-		HUW76_10835	0.63	-1.2
11,719	-		HUW76_10835	0.63	+0.6
11,719	-		HUW76_10835	0.63	-0.2
11,719	-		HUW76_10835	0.63	-0.2
11,719	-		HUW76_10835	0.63	-1.2
11,719	-		HUW76_10835	0.63	+0.1
11,719	-		HUW76_10835	0.63	+0.3
11,719	-		HUW76_10835	0.63	+0.2
11,721	-		HUW76_10835	0.64	+1.0
11,721	-		HUW76_10835	0.64	-0.3
11,733	-		HUW76_10835	0.66	+0.6
11,733	-		HUW76_10835	0.66	-1.1
11,746	+		HUW76_10835	0.68	+1.8
11,754	+		HUW76_10835	0.69	-0.3
11,754	-		HUW76_10835	0.69	-0.1
11,754	-		HUW76_10835	0.69	+0.3
11,754	-		HUW76_10835	0.69	+0.5
11,754	-		HUW76_10835	0.69	+0.2
11,771	+		HUW76_10835	0.72	+3.2
11,774	-		HUW76_10835	0.72	-0.1
11,774	-		HUW76_10835	0.72	-0.0
11,777	-		HUW76_10835	0.73	+1.3
11,777	-		HUW76_10835	0.73	-1.0
11,777	-		HUW76_10835	0.73	+0.7
11,777	-		HUW76_10835	0.73	+1.1
11,779	-		HUW76_10835	0.73	-0.3
11,779	-		HUW76_10835	0.73	-0.5
11,779	-		HUW76_10835	0.73	+0.8
11,779	-		HUW76_10835	0.73	-0.1
11,779	-		HUW76_10835	0.73	-0.1
11,779	-		HUW76_10835	0.73	-0.5
11,779	-		HUW76_10835	0.73	+3.6
11,779	-		HUW76_10835	0.73	-0.2
11,785	-		HUW76_10835	0.74	+0.2
11,785	-		HUW76_10835	0.74	+0.3
11,790	-		HUW76_10835	0.75	-0.3
11,790	-		HUW76_10835	0.75	-0.2
11,813	+		HUW76_10835	0.78	+0.8
11,814	+		HUW76_10835	0.78	+1.4
11,814	+		HUW76_10835	0.78	-0.1
11,814	+		HUW76_10835	0.78	-0.2
11,814	+		HUW76_10835	0.78	-0.9
11,814	+		HUW76_10835	0.78	+0.4
11,821	-		HUW76_10835	0.79	+1.2
11,821	-		HUW76_10835	0.79	-0.1
11,821	-		HUW76_10835	0.79	-0.2
11,821	-		HUW76_10835	0.79	-0.8
11,821	-		HUW76_10835	0.79	+1.3
11,821	-		HUW76_10835	0.79	-0.4
11,822	-		HUW76_10835	0.80	-0.3
11,822	-		HUW76_10835	0.80	-0.5
11,822	-		HUW76_10835	0.80	+0.4
11,822	-		HUW76_10835	0.80	-0.6
11,822	-		HUW76_10835	0.80	-0.1
11,822	-		HUW76_10835	0.80	+0.1
11,822	-		HUW76_10835	0.80	+0.1
11,822	-		HUW76_10835	0.80	-0.3
11,822	-		HUW76_10835	0.80	+0.1
11,833	+		HUW76_10835	0.81	+1.1
11,833	+		HUW76_10835	0.81	+0.3
11,835	+		HUW76_10835	0.82	-0.4
11,835	+		HUW76_10835	0.82	-0.3
11,835	+		HUW76_10835	0.82	+1.2
11,835	+		HUW76_10835	0.82	+0.2
11,840	+		HUW76_10835	0.82	+0.8
11,840	+		HUW76_10835	0.82	-0.1
11,840	+		HUW76_10835	0.82	-0.2
11,841	-		HUW76_10835	0.83	-0.2
11,841	-		HUW76_10835	0.83	+0.1
11,848	-		HUW76_10835	0.84	-0.3
11,848	-		HUW76_10835	0.84	+0.5
11,855	-		HUW76_10835	0.85	-0.1
11,855	-		HUW76_10835	0.85	+0.8
11,862	-		HUW76_10835	0.86	+1.8
11,879	+		HUW76_10835	0.89	-0.5
11,879	+		HUW76_10835	0.89	+0.6
11,879	+		HUW76_10835	0.89	-2.4
11,879	+		HUW76_10835	0.89	-0.1
11,879	+		HUW76_10835	0.89	+0.2
11,879	+		HUW76_10835	0.89	-2.0
11,879	+		HUW76_10835	0.89	-0.2
11,879	+		HUW76_10835	0.89	-0.1
11,879	+		HUW76_10835	0.89	+0.8
11,879	+		HUW76_10835	0.89	+1.2
11,879	+		HUW76_10835	0.89	+0.2
11,879	+		HUW76_10835	0.89	-1.1
11,879	+		HUW76_10835	0.89	+0.3
11,879	+		HUW76_10835	0.89	-0.2
11,879	+		HUW76_10835	0.89	+0.1
11,879	+		HUW76_10835	0.89	+0.4
11,879	+		HUW76_10835	0.89	-0.0
11,879	+		HUW76_10835	0.89	-1.2
11,879	+		HUW76_10835	0.89	-0.4
11,879	+		HUW76_10835	0.89	+2.8
11,879	+		HUW76_10835	0.89	-1.2
11,879	+		HUW76_10835	0.89	+0.6
11,879	+		HUW76_10835	0.89	-0.1
11,879	+		HUW76_10835	0.89	-0.1
11,879	+		HUW76_10835	0.89	-0.1
11,880	+		HUW76_10835	0.89	+0.9
11,880	+		HUW76_10835	0.89	-1.4
11,880	+		HUW76_10835	0.89	+0.9
11,880	+		HUW76_10835	0.89	-1.7
11,887	-				-2.6
11,887	-				-0.4
11,887	-				-0.3
11,887	-				+0.3
11,887	-				-0.2
11,887	-				-0.4
11,887	-				+0.4
11,887	-				-0.2
11,887	-				+0.2
11,887	-				+0.4
11,887	-				-0.1
11,887	-				-0.2
11,887	-				-1.0
11,887	-				+0.6
11,887	-				+0.2
11,887	-				+0.3
11,887	-				+1.5
11,887	-				+0.5
11,887	-				+0.4
11,887	-				-0.1
11,887	-				-0.2
11,887	-				-0.1
11,887	-				+0.3
11,887	-				+0.1
11,887	-				+0.5
11,887	-				-0.4
11,887	-				+0.4
11,887	-				-0.5
11,887	-				-0.2
11,887	-				+0.4
11,887	-				-1.1
11,887	-				-0.5
11,887	-				+0.6
11,887	-				+0.4
11,887	-				+0.0
11,887	-				+0.3
11,887	-				-0.1
11,887	-				-0.6
11,887	-				+0.3
11,887	-				-0.2
11,887	-				-0.2
11,887	-				-0.2
11,887	-				+5.3
11,887	-				+0.0
11,888	-				+0.7
11,888	-				+0.3
11,888	-				+0.0
11,894	+				+0.4
11,897	-				+1.4
11,897	-				+0.3
11,900	+				+0.3
11,908	-				-0.6
11,908	-				-0.2
11,908	-				+1.8
11,908	-				+0.6
11,925	+				+0.4
11,926	+				+1.6
11,929	-				+0.9
11,929	-				-0.4
11,952	+				+0.4
11,953	+				+1.4
11,953	+				-0.5
12,029	+		HUW76_10840	0.25	-0.3
12,029	+		HUW76_10840	0.25	+0.1
12,029	+		HUW76_10840	0.25	+0.2
12,029	+		HUW76_10840	0.25	+0.5
12,037	-		HUW76_10840	0.27	+0.0
12,037	-		HUW76_10840	0.27	-0.1
12,037	-		HUW76_10840	0.27	+0.1
12,037	-		HUW76_10840	0.27	-0.6
12,038	-		HUW76_10840	0.28	+0.1
12,060	-		HUW76_10840	0.36	-0.6
12,060	-		HUW76_10840	0.36	-0.2
12,062	+		HUW76_10840	0.37	-0.4
12,106	-		HUW76_10840	0.53	-0.3
12,106	-		HUW76_10840	0.53	-0.5
12,136	-		HUW76_10840	0.64	-0.0
12,136	-		HUW76_10840	0.64	+0.1
12,136	-		HUW76_10840	0.64	-0.1
12,136	-		HUW76_10840	0.64	+0.3
12,154	+		HUW76_10840	0.70	-0.8
12,190	-		HUW76_10840	0.84	-0.4
12,190	-		HUW76_10840	0.84	-0.2
12,190	-		HUW76_10840	0.84	+0.0
12,193	+		HUW76_10840	0.85	-0.2
12,193	+		HUW76_10840	0.85	-0.7
12,201	-		HUW76_10840	0.88	-0.2
12,201	-		HUW76_10840	0.88	+0.0
12,202	-		HUW76_10840	0.88	-0.7
12,219	+				-2.1
12,219	+				-0.7
12,219	+				-0.6
12,219	+				+0.2
12,227	-				-1.3
12,227	-				-0.0
12,227	-				+0.9
12,227	-				-2.6
12,227	-				-0.3
12,227	-				-0.0
12,269	-				-0.6
12,272	-				-1.5
12,274	+				+0.6
12,279	-				+0.2
12,280	+				+0.7
12,288	-				-0.0
12,290	+				+1.0
12,297	+				-0.9
12,297	+				+0.9
12,297	+				-0.1
12,297	+				+0.2
12,297	+				+0.9
12,297	+				+0.8
12,297	+				+1.5
12,297	+				+2.0
12,297	+				+0.2
12,297	+				+0.7
12,297	+				+0.5
12,297	+				+1.0
12,297	+				+0.9
12,297	+				-0.8
12,297	+				+0.8
12,297	+				+0.1
12,297	+				-0.8
12,297	+				-0.3
12,297	+				+0.5
12,305	-				+1.8
12,305	-				+0.6
12,305	-				+1.8
12,305	-				+0.5
12,305	-				+0.8
12,305	-				+0.1
12,305	-				+1.3
12,305	-				-0.0
12,305	-				-0.0
12,305	-				+0.3
12,305	-				+0.4
12,305	-				-1.0
12,305	-				-0.2
12,305	-				-0.3
12,305	-				+0.4
12,305	-				-0.0
12,305	-				+0.8
12,305	-				-1.5
12,305	-				+0.4
12,305	-				-1.8
12,305	-				-0.6
12,310	-				+0.1
12,312	+				+0.6
12,315	+				-0.6
12,348	-				+0.3
12,348	-				+0.6
12,353	-				+1.3
12,355	-				+0.1
12,380	+		HUW76_10845	0.28	+0.3
12,399	+		HUW76_10845	0.51	+0.3
12,399	+		HUW76_10845	0.51	+0.9
12,399	+		HUW76_10845	0.51	-0.6
12,399	+		HUW76_10845	0.51	-0.1
12,417	+		HUW76_10845	0.72	-0.0
12,424	+		HUW76_10845	0.81	+1.0
12,424	+		HUW76_10845	0.81	+0.2
12,424	+		HUW76_10845	0.81	-0.8
12,424	+		HUW76_10845	0.81	-0.7
12,426	+		HUW76_10845	0.83	-0.1
12,426	+		HUW76_10845	0.83	-0.3
12,426	+		HUW76_10845	0.83	+0.3
12,426	+		HUW76_10845	0.83	+0.5
12,427	-		HUW76_10845	0.84	-0.4
12,429	+		HUW76_10845	0.87	-0.3
12,432	-				-0.2
12,432	-				+0.1
12,432	-				-0.2
12,432	-				+0.4
12,434	+				-0.1
12,439	-				-0.2
12,439	-				+0.1
12,489	-				+0.7
12,489	-				+0.2
12,511	-				+0.0
12,511	-				-0.1
12,513	-				-0.2
12,513	-				+0.6
12,571	+		HUW76_10850	0.19	+0.0
12,571	-		HUW76_10850	0.19	-0.5
12,572	-		HUW76_10850	0.19	+0.4
12,572	-		HUW76_10850	0.19	+0.1
12,572	-		HUW76_10850	0.19	-1.8
12,579	-		HUW76_10850	0.22	+0.5
12,579	-		HUW76_10850	0.22	+1.4
12,579	-		HUW76_10850	0.22	-0.7
12,579	-		HUW76_10850	0.22	+0.1
12,607	-		HUW76_10850	0.33	-0.3
12,677	+		HUW76_10850	0.59	-0.1
12,677	+		HUW76_10850	0.59	-0.1
12,706	+		HUW76_10850	0.70	+0.8
12,706	+		HUW76_10850	0.70	-0.3
12,714	-		HUW76_10850	0.74	-0.2
12,714	-		HUW76_10850	0.74	+0.1
12,716	+		HUW76_10850	0.74	-0.6
12,716	+		HUW76_10850	0.74	-0.2
12,716	+		HUW76_10850	0.74	+0.3
12,716	+		HUW76_10850	0.74	-0.5
12,716	+		HUW76_10850	0.74	+0.6
12,716	+		HUW76_10850	0.74	+0.3
12,716	+		HUW76_10850	0.74	-0.5
12,716	+		HUW76_10850	0.74	-0.7
12,716	+		HUW76_10850	0.74	+0.3
12,716	+		HUW76_10850	0.74	-0.0
12,716	+		HUW76_10850	0.74	+0.9
12,716	+		HUW76_10850	0.74	+0.2
12,716	+		HUW76_10850	0.74	-0.2
12,719	-		HUW76_10850	0.75	+0.2
12,719	-		HUW76_10850	0.75	-0.2
12,724	-		HUW76_10850	0.77	-0.1
12,724	-		HUW76_10850	0.77	-0.4
12,724	-		HUW76_10850	0.77	+0.0
12,724	-		HUW76_10850	0.77	-0.6
12,729	+		HUW76_10850	0.79	+0.0
12,729	+		HUW76_10850	0.79	-0.2
12,729	+		HUW76_10850	0.79	+0.2
12,735	-		HUW76_10850	0.82	-0.2
12,735	-		HUW76_10850	0.82	+0.5
12,735	-		HUW76_10850	0.82	+0.9
12,737	+		HUW76_10850	0.82	-0.2
12,737	+		HUW76_10850	0.82	+1.1
12,737	-		HUW76_10850	0.82	+0.8
12,737	-		HUW76_10850	0.82	+0.3
12,737	-		HUW76_10850	0.82	-0.3
12,737	-		HUW76_10850	0.82	+1.0
12,750	-		HUW76_10850	0.87	-0.2
12,781	-				-0.4
12,852	+				-0.1
12,852	+				-0.7
12,852	+				-0.6
12,852	+				-0.1
12,860	-				+0.0
12,860	-				+0.0
12,860	-				-1.3
12,868	-				+0.0
12,868	-				-0.0
12,868	-				-0.2
12,908	+		HUW76_10855	0.30	-1.3
12,918	-		HUW76_10855	0.36	+0.7
12,929	-		HUW76_10855	0.42	-0.0
12,929	-		HUW76_10855	0.42	+0.2
12,931	+		HUW76_10855	0.43	+1.8
12,939	-		HUW76_10855	0.48	-1.2
12,939	-		HUW76_10855	0.48	+0.6
12,939	-		HUW76_10855	0.48	-0.0
12,939	-		HUW76_10855	0.48	+0.6
12,939	-		HUW76_10855	0.48	+1.1
12,939	-		HUW76_10855	0.48	-0.3
12,966	+		HUW76_10855	0.64	+1.2
12,974	-		HUW76_10855	0.69	-0.3
12,978	+		HUW76_10855	0.71	+1.0
12,978	+		HUW76_10855	0.71	-0.6
13,019	+				+1.9
13,028	+				-0.4
13,028	+				-0.6
13,031	-				-0.3
13,031	-				-0.3
13,031	-				-0.5
13,033	+				+2.2
13,041	-				+0.3
13,041	-				-0.3
13,041	-				+0.4
13,043	-				+0.0
13,043	-				-0.2
13,051	+				+0.4
13,059	-				-0.2
13,059	-				+0.0
13,059	-				-1.1
13,063	-				+0.0
13,063	-				+0.3
13,064	-				-0.9
13,069	-				-0.1
13,074	-				-0.4
13,097	+				-0.5
13,115	+				+0.7
13,115	+				+0.3
13,115	+				+0.2
13,115	+				-2.2
13,115	+				-0.4
13,115	+				+0.2
13,123	+				-0.0
13,199	+				+0.1
13,204	+				-0.3
13,204	+				+0.5
13,204	+				-0.3
13,208	+				-0.0
13,213	+				+0.9