Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_10515

Experiment: Time0_primer_test

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_primer_test
2,210,225	-		HUW76_10510	0.88	-0.5
2,210,225	-		HUW76_10510	0.88	-0.4
2,210,242	-		HUW76_10510	0.88	+0.1
2,210,373	+				-0.4
2,210,373	+				+0.0
2,210,373	+				+0.1
2,210,373	+				+0.6
2,210,392	+				+0.4
2,210,402	+				-1.0
2,210,402	+				-0.1
2,210,402	+				-0.7
2,210,413	+				+0.1
2,210,421	-				-0.0
2,210,421	-				+0.9
2,210,435	+				-0.2
2,210,435	+				-0.6
2,210,513	+				-0.8
2,210,513	+				-0.5
2,210,513	-				+0.5
2,210,513	-				+1.9
2,210,521	-				+1.0
2,210,537	+				-0.2
2,210,537	+				-0.8
2,210,540	-				+1.0
2,210,651	-				+1.0
2,210,651	-				+0.4
2,210,695	-				+1.2
2,210,707	+				-0.2
2,210,729	-				-0.2
2,210,729	-				+0.1
2,210,742	+				+0.0
2,210,747	+				-0.6
2,210,750	+				-0.3
2,210,751	-				+1.1
2,210,755	-				+0.7
2,210,755	-				-0.3
2,210,755	-				+0.6
2,210,755	-				-0.0
2,210,755	-				+0.2
2,210,755	-				-0.2
2,210,781	+				-0.2
2,210,781	+				+0.0
2,210,789	-				-0.2
2,210,789	-				-0.2
2,210,789	-				+0.1
2,210,817	-				-0.1
2,210,842	-				-0.5
2,210,842	-				+0.0
2,210,843	-				+1.7
2,210,843	-				-0.7
2,210,907	-				+1.1
2,210,911	+				-0.4
2,211,212	-		HUW76_10515	0.14	-1.2
2,211,241	-		HUW76_10515	0.26	-0.7
2,211,256	-		HUW76_10515	0.33	-0.6
2,211,256	-		HUW76_10515	0.33	-0.5
2,211,256	-		HUW76_10515	0.33	-0.4
2,211,256	-		HUW76_10515	0.33	-0.4
2,211,269	-		HUW76_10515	0.38	-0.1
2,211,311	+		HUW76_10515	0.55	-0.4
2,211,336	+		HUW76_10515	0.65	+0.7
2,211,336	+		HUW76_10515	0.65	+0.9
2,211,354	-		HUW76_10515	0.73	-0.5
2,211,354	-		HUW76_10515	0.73	+0.1
2,211,400	+				+0.1
2,211,571	+				-0.2
2,211,669	-				-0.2
2,211,699	-				-0.2
2,211,761	+		HUW76_10520	0.14	-0.4
2,211,761	+		HUW76_10520	0.14	-1.6
2,211,761	+		HUW76_10520	0.14	-0.4
2,211,761	+		HUW76_10520	0.14	-0.2
2,211,769	-		HUW76_10520	0.15	-0.3
2,211,791	-		HUW76_10520	0.17	-2.1
2,211,798	+		HUW76_10520	0.18	-0.2
2,211,829	+		HUW76_10520	0.22	-0.3
2,211,829	+		HUW76_10520	0.22	-0.5
2,211,883	+		HUW76_10520	0.28	-0.3
2,211,883	+		HUW76_10520	0.28	-0.0
2,211,883	+		HUW76_10520	0.28	-0.1
2,211,883	+		HUW76_10520	0.28	-0.2
2,211,883	+		HUW76_10520	0.28	-0.0
2,211,883	+		HUW76_10520	0.28	-0.0
2,211,883	+		HUW76_10520	0.28	-0.3
2,211,883	+		HUW76_10520	0.28	-0.4
2,211,883	+		HUW76_10520	0.28	+0.0
2,211,883	+		HUW76_10520	0.28	+0.2
2,211,883	+		HUW76_10520	0.28	-0.1
2,211,883	+		HUW76_10520	0.28	-0.2
2,211,883	+		HUW76_10520	0.28	-0.2
2,211,883	+		HUW76_10520	0.28	-0.5
2,211,883	+		HUW76_10520	0.28	+0.1
2,211,883	+		HUW76_10520	0.28	-0.3
2,211,883	+		HUW76_10520	0.28	-0.1
2,211,883	+		HUW76_10520	0.28	+0.1
2,211,883	+		HUW76_10520	0.28	-1.1
2,211,883	+		HUW76_10520	0.28	+1.6
2,211,883	+		HUW76_10520	0.28	-0.4
2,211,891	-		HUW76_10520	0.29	-0.7
2,211,891	-		HUW76_10520	0.29	+0.9
2,211,891	-		HUW76_10520	0.29	+0.2
2,211,891	-		HUW76_10520	0.29	-1.3
2,211,891	-		HUW76_10520	0.29	-0.9
2,211,891	-		HUW76_10520	0.29	+0.1
2,211,891	-		HUW76_10520	0.29	-0.1
2,211,891	-		HUW76_10520	0.29	+0.2
2,211,891	-		HUW76_10520	0.29	-0.7
2,211,891	-		HUW76_10520	0.29	-1.5
2,211,891	-		HUW76_10520	0.29	+0.3
2,211,891	-		HUW76_10520	0.29	-0.9
2,211,891	-		HUW76_10520	0.29	-0.5
2,211,891	-		HUW76_10520	0.29	+0.2
2,211,891	-		HUW76_10520	0.29	+0.2
2,211,891	-		HUW76_10520	0.29	+0.8
2,211,891	-		HUW76_10520	0.29	+0.3
2,211,891	-		HUW76_10520	0.29	+1.2
2,211,891	-		HUW76_10520	0.29	+0.1
2,211,891	-		HUW76_10520	0.29	-0.3
2,211,891	-		HUW76_10520	0.29	+0.0
2,211,901	-		HUW76_10520	0.30	+0.4
2,211,901	-		HUW76_10520	0.30	-0.3
2,211,901	-		HUW76_10520	0.30	-0.4
2,211,901	-		HUW76_10520	0.30	+0.3
2,211,907	+		HUW76_10520	0.30	-0.4
2,211,914	-		HUW76_10520	0.31	+0.6
2,211,914	-		HUW76_10520	0.31	+0.1
2,211,915	-		HUW76_10520	0.31	-0.2
2,211,924	-		HUW76_10520	0.32	+0.6
2,211,948	+		HUW76_10520	0.35	+0.5
2,211,948	+		HUW76_10520	0.35	-0.4
2,211,948	+		HUW76_10520	0.35	-0.0
2,211,955	+		HUW76_10520	0.36	-0.7
2,211,963	-		HUW76_10520	0.37	-0.1
2,211,972	-		HUW76_10520	0.38	-0.2
2,211,972	-		HUW76_10520	0.38	+0.3
2,211,975	+		HUW76_10520	0.38	-0.7
2,211,975	+		HUW76_10520	0.38	-0.6
2,211,978	-		HUW76_10520	0.39	-0.6
2,211,978	-		HUW76_10520	0.39	+0.4
2,212,035	-		HUW76_10520	0.45	+0.5
2,212,035	-		HUW76_10520	0.45	-0.3
2,212,126	+		HUW76_10520	0.56	-0.6
2,212,134	-		HUW76_10520	0.56	-0.5
2,212,134	-		HUW76_10520	0.56	-0.2
2,212,139	-		HUW76_10520	0.57	+0.4
2,212,142	-		HUW76_10520	0.57	-0.1
2,212,162	-		HUW76_10520	0.60	-0.4
2,212,173	+		HUW76_10520	0.61	-0.6
2,212,181	+		HUW76_10520	0.62	-0.1
2,212,181	+		HUW76_10520	0.62	-0.3
2,212,196	-		HUW76_10520	0.64	-0.5
2,212,250	+		HUW76_10520	0.70	-0.0
2,212,250	+		HUW76_10520	0.70	-0.1
2,212,250	+		HUW76_10520	0.70	-0.1
2,212,250	+		HUW76_10520	0.70	-0.5
2,212,258	-		HUW76_10520	0.71	-0.5
2,212,258	-		HUW76_10520	0.71	-0.5
2,212,258	-		HUW76_10520	0.71	-0.1
2,212,319	-		HUW76_10520	0.78	+0.4
2,212,321	+		HUW76_10520	0.78	-0.1
2,212,321	+		HUW76_10520	0.78	-0.8
2,212,321	+		HUW76_10520	0.78	-0.2
2,212,321	+		HUW76_10520	0.78	-0.4
2,212,321	+		HUW76_10520	0.78	-0.8
2,212,321	+		HUW76_10520	0.78	+0.2
2,212,321	+		HUW76_10520	0.78	-0.1
2,212,329	-		HUW76_10520	0.79	-0.6
2,212,329	-		HUW76_10520	0.79	-0.5