Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4617

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
1,564,006	+				+0.2
1,564,006	+				-0.2
1,564,007	-				+0.5
1,564,039	+				+0.1
1,564,087	-				-0.1
1,564,383	+		GFF4616	0.35	+0.4
1,564,384	-		GFF4616	0.35	+0.1
1,564,384	-		GFF4616	0.35	+0.4
1,564,773	+		GFF4616	0.77	+0.3
1,564,773	+		GFF4616	0.77	-0.3
1,564,773	+		GFF4616	0.77	+1.0
1,564,773	+		GFF4616	0.77	-0.4
1,564,773	+		GFF4616	0.77	-0.2
1,564,774	-		GFF4616	0.77	-0.0
1,564,774	-		GFF4616	0.77	+0.5
1,564,774	-		GFF4616	0.77	+0.2
1,564,887	+		GFF4616	0.89	+0.3
1,564,888	-		GFF4616	0.89	+0.0
1,565,055	+		GFF4617	0.13	-0.4
1,565,067	+		GFF4617	0.15	+0.0
1,565,067	+		GFF4617	0.15	-0.1
1,565,139	+		GFF4617	0.31	-0.1
1,565,305	-		GFF4617	0.68	+0.3
1,565,359	-		GFF4617	0.79	-0.7
1,565,359	-		GFF4617	0.79	-0.3
1,565,359	-		GFF4617	0.79	-0.3
1,565,558	-		GFF4618	0.12	+0.2
1,565,594	+		GFF4618	0.16	-0.2
1,565,594	+		GFF4618	0.16	-0.3
1,565,594	+		GFF4618	0.16	-0.2
1,565,594	+		GFF4618	0.16	-0.2
1,565,595	-		GFF4618	0.16	+0.3
1,565,599	+		GFF4618	0.16	-0.2
1,565,599	+		GFF4618	0.16	-0.0
1,565,599	+		GFF4618	0.16	+0.7
1,565,801	+		GFF4618	0.38	+0.1
1,565,801	+		GFF4618	0.38	+0.5
1,565,843	+		GFF4618	0.43	+0.2
1,565,844	-		GFF4618	0.43	+1.8
1,565,844	-		GFF4618	0.43	-0.4
1,565,877	-		GFF4618	0.46	+0.1
1,565,877	-		GFF4618	0.46	-0.2
1,565,888	+		GFF4618	0.48	+0.6
1,565,888	+		GFF4618	0.48	+1.1
1,565,888	+		GFF4618	0.48	-0.8
1,565,889	-		GFF4618	0.48	-0.1
1,565,889	-		GFF4618	0.48	+0.2
1,565,889	-		GFF4618	0.48	-0.7
1,565,889	-		GFF4618	0.48	+0.4
1,565,889	-		GFF4618	0.48	+0.2
1,565,889	-		GFF4618	0.48	-0.2
1,565,889	-		GFF4618	0.48	+0.5
1,565,889	-		GFF4618	0.48	+0.2
1,565,889	-		GFF4618	0.48	+0.3
1,566,064	-		GFF4618	0.67	+0.0
1,566,135	-		GFF4618	0.74	+0.4
1,566,246	+		GFF4618	0.87	-0.4
1,566,247	-		GFF4618	0.87	-0.1
1,566,275	+		GFF4618	0.90	+0.1
1,566,275	+		GFF4618	0.90	+0.2
1,566,275	+		GFF4618	0.90	+0.1
1,566,275	+		GFF4618	0.90	-0.2
1,566,276	-		GFF4618	0.90	+0.2
1,566,276	-		GFF4618	0.90	+0.2
1,566,323	-				+1.5