Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4502

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
1,427,971	+				-0.7
1,428,052	-				-0.1
1,428,151	+		GFF4501	0.12	+1.1
1,428,151	+		GFF4501	0.12	+1.0
1,428,151	+		GFF4501	0.12	-0.9
1,428,152	-		GFF4501	0.13	-0.0
1,428,152	-		GFF4501	0.13	-1.6
1,428,341	-		GFF4501	0.40	+0.2
1,428,379	+		GFF4501	0.46	-2.2
1,428,379	+		GFF4501	0.46	-1.3
1,428,379	+		GFF4501	0.46	-0.1
1,428,379	+		GFF4501	0.46	+0.1
1,428,379	+		GFF4501	0.46	-0.5
1,428,379	+		GFF4501	0.46	+0.2
1,428,380	-		GFF4501	0.46	+0.3
1,428,380	-		GFF4501	0.46	-1.8
1,428,479	+		GFF4501	0.60	+0.3
1,428,479	+		GFF4501	0.60	+0.2
1,428,479	+		GFF4501	0.60	+0.6
1,428,480	-		GFF4501	0.60	-0.7
1,428,480	-		GFF4501	0.60	+0.2
1,428,480	-		GFF4501	0.60	+0.5
1,428,976	+				+0.6
1,428,976	+				-0.3
1,429,393	+		GFF4502	0.53	-1.5
1,429,393	+		GFF4502	0.53	+0.1
1,429,394	-		GFF4502	0.53	-0.6
1,429,881	-				+0.4
1,429,881	-				-0.9
1,429,881	-				+1.2
1,430,259	-				-0.4
1,430,394	+		GFF4504	0.23	-0.4
1,430,394	+		GFF4504	0.23	-0.7
1,430,394	+		GFF4504	0.23	-0.4
1,430,395	-		GFF4504	0.23	-0.3
1,430,395	-		GFF4504	0.23	+0.2
1,430,395	-		GFF4504	0.23	+0.1
1,430,395	-		GFF4504	0.23	+1.5
1,430,395	-		GFF4504	0.23	-0.1
1,430,712	+		GFF4504	0.89	+0.2
1,430,712	+		GFF4504	0.89	-0.2
1,430,712	+		GFF4504	0.89	+0.4
1,430,712	+		GFF4504	0.89	+0.2
1,430,712	+		GFF4504	0.89	-0.0
1,430,712	+		GFF4504	0.89	-0.1
1,430,712	-		GFF4504	0.89	-0.5
1,430,713	-		GFF4504	0.90	+0.0
1,430,713	-		GFF4504	0.90	+0.3
1,430,713	-		GFF4504	0.90	+0.2
1,430,713	-		GFF4504	0.90	-0.1
1,430,713	-		GFF4504	0.90	+0.0
1,430,713	-		GFF4504	0.90	-0.2
1,430,737	-				+0.1
1,430,827	+				+0.1
1,430,827	+				+0.2
1,430,828	-				-0.4
1,430,828	-				-0.5
1,430,828	-				+0.2