Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3498

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
377,003	+				+0.1
377,276	+				-1.2
377,276	+				+0.2
377,277	-				-0.2
377,690	+		GFF3498	0.50	+1.3
377,690	+		GFF3498	0.50	+0.2
377,691	-		GFF3498	0.50	+0.1
377,876	+		GFF3498	0.85	+0.4
378,106	+				-0.1
378,106	+				-0.4
378,107	-				-0.0
378,331	+				+2.5
378,332	-				-0.4
378,548	+		GFF3499	0.21	+0.7
378,549	-		GFF3499	0.21	-0.2
378,645	+		GFF3499	0.33	-0.9
378,720	+		GFF3499	0.42	-0.2
378,721	-		GFF3499	0.42	+0.3