Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3270

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
153,371	+				-0.1
153,633	+		GFF3270	0.13	-0.1
154,338	+		GFF3270	0.82	+0.3
154,339	-		GFF3270	0.82	+0.3
154,683	-				-0.1
154,703	+				-0.0
154,703	+				+0.8
154,736	+		GFF3271	0.12	-0.0
154,736	+		GFF3271	0.12	-0.6
154,773	-		GFF3271	0.15	-0.7
154,838	+		GFF3271	0.20	-0.4
154,853	+		GFF3271	0.21	+0.4
154,865	+		GFF3271	0.22	-0.6
155,009	+		GFF3271	0.33	+0.2
155,009	+		GFF3271	0.33	+0.0
155,058	-		GFF3271	0.37	-0.7
155,069	+		GFF3271	0.38	+0.4