Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2260

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
1,143,138	-		GFF2259	0.46	+0.5
1,143,149	+		GFF2259	0.47	-1.9
1,143,239	+		GFF2259	0.53	-0.1
1,143,239	+		GFF2259	0.53	-0.1
1,143,239	+		GFF2259	0.53	-0.1
1,143,239	+		GFF2259	0.53	+0.6
1,143,239	+		GFF2259	0.53	+0.5
1,143,240	-		GFF2259	0.53	+0.0
1,143,240	-		GFF2259	0.53	-0.3
1,143,240	-		GFF2259	0.53	+0.1
1,143,240	-		GFF2259	0.53	+1.0
1,143,269	+		GFF2259	0.55	+0.6
1,143,270	-		GFF2259	0.55	+0.3
1,143,270	-		GFF2259	0.55	+0.4
1,143,270	-		GFF2259	0.55	+0.7
1,143,486	-		GFF2259	0.70	+0.2
1,143,521	+		GFF2259	0.72	+0.4
1,143,584	+		GFF2259	0.76	-1.9
1,143,584	+		GFF2259	0.76	-0.3
1,143,585	-		GFF2259	0.77	-0.2
1,143,585	-		GFF2259	0.77	-0.7
1,143,585	-		GFF2259	0.77	-1.1
1,143,585	-		GFF2259	0.77	-0.5
1,143,740	+		GFF2259	0.87	-0.0
1,143,740	+		GFF2259	0.87	-0.1
1,143,741	-		GFF2259	0.87	-0.1
1,143,935	+				-0.5
1,144,201	+		GFF2260	0.19	-1.0
1,144,633	+		GFF2260	0.49	-1.3
1,144,943	-		GFF2260	0.71	-0.1
1,144,943	-		GFF2260	0.71	-0.0
1,144,984	+		GFF2260	0.74	+0.1
1,144,984	+		GFF2260	0.74	-0.2
1,144,984	+		GFF2260	0.74	-0.8
1,144,985	-		GFF2260	0.74	+0.1
1,144,985	-		GFF2260	0.74	+0.5
1,144,985	-		GFF2260	0.74	+1.1
1,145,152	+		GFF2260	0.85	-0.3
1,145,153	-		GFF2260	0.85	-0.1
1,145,168	-		GFF2260	0.86	+0.7
1,145,168	-		GFF2260	0.86	-0.8
1,145,260	+				+0.6
1,145,579	+		GFF2261	0.13	+0.0
1,145,579	+		GFF2261	0.13	-0.8
1,145,579	+		GFF2261	0.13	+0.3
1,145,579	+		GFF2261	0.13	+0.2
1,145,580	-		GFF2261	0.13	+0.0
1,145,580	-		GFF2261	0.13	-1.2
1,145,660	+		GFF2261	0.18	+0.5
1,145,715	-		GFF2261	0.21	+0.0
1,145,715	-		GFF2261	0.21	+0.2
1,145,926	-		GFF2261	0.34	+0.4