Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1646

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
500,949	-		GFF1645	0.30	+1.3
500,966	+		GFF1645	0.31	+0.1
500,966	+		GFF1645	0.31	+0.4
501,534	-		GFF1645	0.79	-0.6
501,811	+				-0.2
501,860	-				+1.0
502,340	-		GFF1646	0.46	-0.6
502,432	+		GFF1646	0.53	+0.4
502,432	+		GFF1646	0.53	-0.9
502,432	+		GFF1646	0.53	-0.3
502,433	-		GFF1646	0.53	-1.0
502,433	-		GFF1646	0.53	-0.1
502,433	-		GFF1646	0.53	+0.3
502,435	+		GFF1646	0.54	+0.8
502,492	+		GFF1646	0.58	+1.3
502,738	+		GFF1646	0.79	+0.4
502,738	+		GFF1646	0.79	+0.4
502,739	-		GFF1646	0.79	-0.3
503,026	+				-0.8
503,306	-		GFF1647	0.25	+0.2
503,347	+		GFF1647	0.28	-0.3
503,347	+		GFF1647	0.28	-1.1
503,989	+		GFF1647	0.84	-0.7
503,989	+		GFF1647	0.84	+0.7