Strain Fitness in Escherichia fergusonii Becca around EFB2_02960

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
3,089,698	+				-0.5
3,089,698	+				-0.4
3,089,714	-				+0.6
3,089,769	+				-2.4
3,089,802	+				-1.2
3,089,854	-				-0.2
3,089,866	-				-1.1
3,089,866	-				+0.4
3,089,907	-				-1.6
3,089,994	-				+1.6
3,090,000	-				+1.1
3,090,072	-				+1.1
3,090,206	+		EFB2_02959	0.22	-2.4
3,090,248	-		EFB2_02959	0.29	+4.6
3,090,333	-		EFB2_02959	0.45	+2.0
3,090,333	-		EFB2_02959	0.45	+1.1
3,090,341	+		EFB2_02959	0.46	-0.6
3,090,471	-		EFB2_02959	0.70	-0.1
3,090,471	-		EFB2_02959	0.70	+1.4
3,090,471	-		EFB2_02959	0.70	+1.0
3,090,474	-		EFB2_02959	0.71	-1.5
3,090,474	-		EFB2_02959	0.71	-0.8
3,090,536	-		EFB2_02959	0.82	+1.8
3,090,536	-		EFB2_02959	0.82	+1.8
3,090,536	-		EFB2_02959	0.82	-0.4
3,090,539	+		EFB2_02959	0.83	+3.2
3,090,540	-		EFB2_02959	0.83	+1.5
3,090,540	-		EFB2_02959	0.83	-1.6
3,090,540	-		EFB2_02959	0.83	+1.4
3,090,540	-		EFB2_02959	0.83	+1.7
3,090,540	-		EFB2_02959	0.83	-1.7
3,090,540	-		EFB2_02959	0.83	+1.2
3,090,540	-		EFB2_02959	0.83	-1.4
3,090,540	-		EFB2_02959	0.83	-0.8
3,090,542	-		EFB2_02959	0.83	-1.3
3,090,542	-		EFB2_02959	0.83	+0.2
3,090,542	-		EFB2_02959	0.83	-0.5
3,090,614	-				+3.2
3,090,656	+				+0.6
3,090,662	-				-1.5
3,090,675	-				+0.1
3,090,720	+				-0.7
3,090,721	-				+0.3
3,090,721	-				-1.0
3,090,721	-				-0.4
3,090,721	-				+0.6
3,090,721	-				-2.2
3,090,721	-				-0.4
3,090,721	-				+0.4
3,090,721	-				-0.5
3,090,735	-				+0.6
3,090,737	+				+2.0
3,090,738	-				+0.7
3,090,738	-				+0.9
3,090,761	-				+1.6
3,090,790	-		EFB2_02960	0.11	-1.7
3,090,864	-		EFB2_02960	0.17	-1.5
3,090,864	-		EFB2_02960	0.17	+1.6
3,090,864	-		EFB2_02960	0.17	-0.6
3,090,864	-		EFB2_02960	0.17	-1.0
3,090,893	+		EFB2_02960	0.20	-0.9
3,090,894	-		EFB2_02960	0.20	+1.2
3,090,894	-		EFB2_02960	0.20	+0.5
3,090,895	+		EFB2_02960	0.20	-0.8
3,090,896	-		EFB2_02960	0.20	-0.2
3,090,899	-		EFB2_02960	0.20	+0.8
3,090,899	-		EFB2_02960	0.20	-2.4
3,090,899	-		EFB2_02960	0.20	+0.3
3,090,909	+		EFB2_02960	0.21	+1.2
3,090,909	+		EFB2_02960	0.21	+0.6
3,090,909	+		EFB2_02960	0.21	-1.1
3,090,910	-		EFB2_02960	0.21	+1.6
3,090,910	-		EFB2_02960	0.21	-0.4
3,090,912	-		EFB2_02960	0.22	+0.9
3,090,912	-		EFB2_02960	0.22	-0.4
3,090,995	+		EFB2_02960	0.29	-3.1
3,090,995	+		EFB2_02960	0.29	+0.4
3,090,996	-		EFB2_02960	0.29	+0.0
3,090,996	-		EFB2_02960	0.29	+2.0
3,090,996	-		EFB2_02960	0.29	+1.2
3,090,996	-		EFB2_02960	0.29	+1.4
3,090,999	-		EFB2_02960	0.29	+0.8
3,090,999	-		EFB2_02960	0.29	-0.4
3,091,001	+		EFB2_02960	0.29	-0.6
3,091,002	-		EFB2_02960	0.29	+1.3
3,091,002	-		EFB2_02960	0.29	-0.5
3,091,002	-		EFB2_02960	0.29	-2.2
3,091,012	+		EFB2_02960	0.30	-0.7
3,091,013	-		EFB2_02960	0.30	+2.2
3,091,018	-		EFB2_02960	0.31	+0.6
3,091,018	-		EFB2_02960	0.31	+3.2
3,091,018	-		EFB2_02960	0.31	+0.1
3,091,018	-		EFB2_02960	0.31	-2.0
3,091,018	-		EFB2_02960	0.31	+0.5
3,091,020	-		EFB2_02960	0.31	+0.2
3,091,020	-		EFB2_02960	0.31	-3.4
3,091,090	-		EFB2_02960	0.37	+0.3
3,091,106	+		EFB2_02960	0.39	+2.2
3,091,106	+		EFB2_02960	0.39	+0.6
3,091,106	+		EFB2_02960	0.39	+0.9
3,091,107	-		EFB2_02960	0.39	+1.2
3,091,107	-		EFB2_02960	0.39	+0.0
3,091,107	-		EFB2_02960	0.39	-0.1
3,091,107	-		EFB2_02960	0.39	+0.6
3,091,110	-		EFB2_02960	0.39	-1.5
3,091,110	-		EFB2_02960	0.39	+0.3
3,091,110	-		EFB2_02960	0.39	+1.2
3,091,110	-		EFB2_02960	0.39	+1.4
3,091,110	-		EFB2_02960	0.39	+0.7
3,091,116	+		EFB2_02960	0.39	-0.4
3,091,116	+		EFB2_02960	0.39	+0.5
3,091,117	-		EFB2_02960	0.40	-0.9
3,091,117	-		EFB2_02960	0.40	+0.5
3,091,117	-		EFB2_02960	0.40	+2.5
3,091,117	-		EFB2_02960	0.40	+0.4
3,091,117	-		EFB2_02960	0.40	+1.2
3,091,126	-		EFB2_02960	0.40	-0.7
3,091,166	+		EFB2_02960	0.44	-0.5
3,091,166	+		EFB2_02960	0.44	+1.2
3,091,167	-		EFB2_02960	0.44	+1.1
3,091,167	-		EFB2_02960	0.44	+0.6
3,091,167	-		EFB2_02960	0.44	+2.8
3,091,187	+		EFB2_02960	0.46	+0.0
3,091,187	+		EFB2_02960	0.46	+1.6
3,091,188	-		EFB2_02960	0.46	-0.9
3,091,188	-		EFB2_02960	0.46	-1.0
3,091,188	-		EFB2_02960	0.46	-1.8
3,091,188	-		EFB2_02960	0.46	-1.7
3,091,188	-		EFB2_02960	0.46	-2.3
3,091,198	+		EFB2_02960	0.47	-1.4
3,091,198	+		EFB2_02960	0.47	-0.6
3,091,199	-		EFB2_02960	0.47	-2.4
3,091,199	-		EFB2_02960	0.47	-0.2
3,091,199	-		EFB2_02960	0.47	-0.8
3,091,199	-		EFB2_02960	0.47	-0.4
3,091,199	-		EFB2_02960	0.47	+1.0
3,091,206	+		EFB2_02960	0.47	-1.4
3,091,206	+		EFB2_02960	0.47	+0.2
3,091,206	+		EFB2_02960	0.47	-0.4
3,091,207	-		EFB2_02960	0.47	+1.6
3,091,207	-		EFB2_02960	0.47	-1.2
3,091,207	-		EFB2_02960	0.47	-0.9
3,091,218	-		EFB2_02960	0.48	+0.3
3,091,251	+		EFB2_02960	0.51	+1.9
3,091,251	+		EFB2_02960	0.51	-1.1
3,091,252	-		EFB2_02960	0.51	-0.1
3,091,252	-		EFB2_02960	0.51	+1.2
3,091,252	-		EFB2_02960	0.51	+0.6
3,091,274	+		EFB2_02960	0.53	+0.6
3,091,274	+		EFB2_02960	0.53	-1.9
3,091,274	+		EFB2_02960	0.53	+0.4
3,091,275	-		EFB2_02960	0.53	+0.1
3,091,275	-		EFB2_02960	0.53	-0.2
3,091,315	-		EFB2_02960	0.57	-1.2
3,091,325	+		EFB2_02960	0.58	+0.6
3,091,326	-		EFB2_02960	0.58	-0.8
3,091,326	-		EFB2_02960	0.58	-0.6
3,091,326	-		EFB2_02960	0.58	-0.1
3,091,326	-		EFB2_02960	0.58	-0.9
3,091,326	-		EFB2_02960	0.58	+1.2
3,091,327	+		EFB2_02960	0.58	-0.5
3,091,327	+		EFB2_02960	0.58	+2.2
3,091,327	+		EFB2_02960	0.58	-0.6
3,091,327	+		EFB2_02960	0.58	-1.9
3,091,328	-		EFB2_02960	0.58	+2.1
3,091,328	-		EFB2_02960	0.58	-0.9
3,091,328	-		EFB2_02960	0.58	+1.2
3,091,328	-		EFB2_02960	0.58	-0.4
3,091,328	-		EFB2_02960	0.58	-1.4
3,091,328	-		EFB2_02960	0.58	-0.6
3,091,328	-		EFB2_02960	0.58	-1.1
3,091,328	-		EFB2_02960	0.58	-0.1
3,091,382	+		EFB2_02960	0.63	-0.4
3,091,404	-		EFB2_02960	0.65	+0.2
3,091,433	+		EFB2_02960	0.67	+0.6
3,091,433	+		EFB2_02960	0.67	+0.6
3,091,433	+		EFB2_02960	0.67	-0.8
3,091,433	+		EFB2_02960	0.67	+0.4
3,091,433	+		EFB2_02960	0.67	-1.5
3,091,433	+		EFB2_02960	0.67	-1.3
3,091,433	+		EFB2_02960	0.67	+1.5
3,091,433	+		EFB2_02960	0.67	+2.2
3,091,433	+		EFB2_02960	0.67	+0.2
3,091,433	+		EFB2_02960	0.67	+1.9
3,091,433	+		EFB2_02960	0.67	+0.2
3,091,433	+		EFB2_02960	0.67	+1.0
3,091,433	+		EFB2_02960	0.67	+0.2
3,091,434	-		EFB2_02960	0.67	-0.9
3,091,434	-		EFB2_02960	0.67	+0.7
3,091,434	-		EFB2_02960	0.67	-0.6
3,091,434	-		EFB2_02960	0.67	+0.2
3,091,434	-		EFB2_02960	0.67	+2.1
3,091,434	-		EFB2_02960	0.67	-2.0
3,091,434	-		EFB2_02960	0.67	-0.0
3,091,434	-		EFB2_02960	0.67	-1.4
3,091,434	-		EFB2_02960	0.67	-0.5
3,091,434	-		EFB2_02960	0.67	-0.0
3,091,434	-		EFB2_02960	0.67	+0.6
3,091,434	-		EFB2_02960	0.67	-1.4
3,091,434	-		EFB2_02960	0.67	-0.6
3,091,434	-		EFB2_02960	0.67	+0.5
3,091,434	-		EFB2_02960	0.67	-0.7
3,091,434	-		EFB2_02960	0.67	+0.7
3,091,434	-		EFB2_02960	0.67	+1.6
3,091,434	-		EFB2_02960	0.67	+0.8
3,091,434	-		EFB2_02960	0.67	-0.8
3,091,490	+		EFB2_02960	0.72	+1.2
3,091,490	+		EFB2_02960	0.72	-2.5
3,091,491	-		EFB2_02960	0.72	+0.1
3,091,491	-		EFB2_02960	0.72	+0.8
3,091,496	-		EFB2_02960	0.73	-0.6
3,091,512	-		EFB2_02960	0.74	+0.6
3,091,512	-		EFB2_02960	0.74	-1.4
3,091,523	-		EFB2_02960	0.75	-1.3
3,091,523	-		EFB2_02960	0.75	-0.5
3,091,523	-		EFB2_02960	0.75	-0.0
3,091,541	+		EFB2_02960	0.77	+0.8
3,091,541	+		EFB2_02960	0.77	+1.9
3,091,541	+		EFB2_02960	0.77	+0.9
3,091,541	+		EFB2_02960	0.77	+0.4
3,091,541	+		EFB2_02960	0.77	+1.7
3,091,541	+		EFB2_02960	0.77	+2.2
3,091,541	+		EFB2_02960	0.77	+0.1
3,091,541	+		EFB2_02960	0.77	-0.5
3,091,541	+		EFB2_02960	0.77	-0.7
3,091,541	+		EFB2_02960	0.77	-0.4
3,091,541	+		EFB2_02960	0.77	-0.4
3,091,542	-		EFB2_02960	0.77	+1.2
3,091,542	-		EFB2_02960	0.77	+0.5
3,091,542	-		EFB2_02960	0.77	-1.8
3,091,542	-		EFB2_02960	0.77	-2.9
3,091,542	-		EFB2_02960	0.77	+0.5
3,091,542	-		EFB2_02960	0.77	-1.8
3,091,542	-		EFB2_02960	0.77	-0.2
3,091,542	-		EFB2_02960	0.77	+0.8
3,091,542	-		EFB2_02960	0.77	-2.0
3,091,542	-		EFB2_02960	0.77	-2.3
3,091,542	-		EFB2_02960	0.77	-0.4
3,091,542	-		EFB2_02960	0.77	+0.4
3,091,542	-		EFB2_02960	0.77	-1.2
3,091,542	-		EFB2_02960	0.77	+1.8
3,091,542	-		EFB2_02960	0.77	+0.1
3,091,598	+		EFB2_02960	0.82	-1.2
3,091,649	+		EFB2_02960	0.86	-1.8
3,091,649	+		EFB2_02960	0.86	-0.8
3,091,649	+		EFB2_02960	0.86	+1.0
3,091,649	+		EFB2_02960	0.86	+1.1
3,091,649	+		EFB2_02960	0.86	-1.0
3,091,649	+		EFB2_02960	0.86	-1.1
3,091,649	+		EFB2_02960	0.86	+0.5
3,091,650	-		EFB2_02960	0.86	+0.3
3,091,650	-		EFB2_02960	0.86	+1.9
3,091,650	-		EFB2_02960	0.86	-1.1
3,091,650	-		EFB2_02960	0.86	+0.9
3,091,650	-		EFB2_02960	0.86	-3.1
3,091,650	-		EFB2_02960	0.86	-0.4
3,091,650	-		EFB2_02960	0.86	-1.5
3,091,650	-		EFB2_02960	0.86	+0.9
3,091,650	-		EFB2_02960	0.86	+1.6
3,091,667	+		EFB2_02960	0.88	-1.1
3,091,668	-		EFB2_02960	0.88	+0.8
3,091,678	+		EFB2_02960	0.89	-0.1
3,091,678	+		EFB2_02960	0.89	-0.6
3,091,678	+		EFB2_02960	0.89	+0.2
3,091,679	-		EFB2_02960	0.89	+0.1
3,091,679	-		EFB2_02960	0.89	+0.0
3,091,679	-		EFB2_02960	0.89	+0.5
3,091,679	-		EFB2_02960	0.89	+1.1
3,091,679	-		EFB2_02960	0.89	+0.2
3,091,679	-		EFB2_02960	0.89	+0.8
3,091,679	-		EFB2_02960	0.89	+0.5
3,091,679	-		EFB2_02960	0.89	-0.9
3,091,679	-		EFB2_02960	0.89	-0.0
3,091,710	+				+0.7
3,091,711	-				+0.7
3,091,711	-				+0.4
3,091,711	-				-0.5
3,091,711	-				-0.9
3,091,720	-				-0.9
3,091,735	-				+0.3
3,091,737	+				-0.6
3,091,737	+				+1.9
3,091,738	-				+0.1
3,091,738	-				+2.2
3,091,763	-				-0.9
3,091,767	+				+0.4
3,091,768	-				-1.0
3,091,768	-				+1.3
3,091,777	+				+0.9
3,091,778	-				+0.4
3,091,778	-				-2.4
3,091,778	-				+1.9
3,091,778	-				+0.0
3,091,778	-				-0.2
3,091,781	-				-0.6
3,091,822	-				-1.8
3,091,828	+				+0.6
3,091,828	+				+0.1
3,091,828	+				-1.1
3,091,828	+				+0.6
3,091,829	-				-0.2
3,091,829	-				-0.5
3,091,829	-				+3.8
3,091,829	-				+0.6
3,091,829	-				+3.0
3,091,831	-				-0.9
3,091,831	-				+3.6
3,091,832	+				-0.5
3,091,832	+				-0.0
3,091,832	+				-0.1
3,091,832	+				+0.5
3,091,832	+				-1.0
3,091,832	+				-0.2
3,091,832	+				-0.5
3,091,832	+				+0.5
3,091,832	+				+1.3
3,091,832	+				-1.2
3,091,832	+				-1.6
3,091,832	+				-1.3
3,091,832	+				+0.2
3,091,832	+				+0.8
3,091,832	+				+0.6
3,091,832	+				+1.2
3,091,833	-				-2.3
3,091,833	-				+2.8
3,091,833	-				+0.5
3,091,833	-				+1.5
3,091,833	-				+0.6
3,091,833	-				-0.9
3,091,833	-				+0.8
3,091,833	-				+0.6
3,091,833	-				+0.1
3,091,833	-				-1.2
3,091,833	-				+1.1
3,091,833	-				+1.2
3,091,839	+				+1.0
3,091,839	+				-1.4
3,091,840	-				+0.9
3,091,840	-				-0.1
3,091,840	-				-0.5
3,091,840	-				+0.3
3,091,852	-				-0.0
3,091,852	-				+1.6
3,091,852	-				+0.4
3,091,882	+				+1.5
3,091,883	-				-1.4
3,091,883	-				-0.4
3,091,883	-				+1.7
3,091,883	-				+0.4
3,091,883	-				-0.2
3,091,886	+				+0.2
3,091,887	-				+0.5
3,091,887	-				+0.5
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