Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5528

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,532,353	-		GFF5527	0.34	-1.3
2,532,454	+		GFF5527	0.41	-0.4
2,532,455	-		GFF5527	0.41	-0.5
2,532,997	+		GFF5527	0.82	-0.4
2,532,997	+		GFF5527	0.82	-0.3
2,532,997	+		GFF5527	0.82	+0.3
2,532,998	-		GFF5527	0.82	-0.2
2,533,367	-		GFF5528	0.14	+0.5
2,533,805	-		GFF5528	0.71	+0.2
2,533,807	+		GFF5528	0.71	+0.4
2,534,081	+				-1.2
2,534,081	+				-0.0
2,534,082	-				-0.5
2,534,250	+		GFF5529	0.16	+1.0
2,534,250	+		GFF5529	0.16	-0.9
2,534,250	+		GFF5529	0.16	-0.0
2,534,250	+		GFF5529	0.16	+0.0
2,534,251	-		GFF5529	0.16	+0.8
2,534,400	+		GFF5529	0.32	+0.1
2,534,457	+		GFF5529	0.39	-1.7
2,534,473	-		GFF5529	0.40	-0.0
2,534,473	-		GFF5529	0.40	-0.4
2,534,589	+		GFF5529	0.53	-1.2