Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5527

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,531,034	+		GFF5526	0.31	+0.1
2,531,119	-		GFF5526	0.37	+0.2
2,531,214	+		GFF5526	0.45	+0.3
2,531,214	+		GFF5526	0.45	+0.0
2,531,214	+		GFF5526	0.45	-0.6
2,531,214	+		GFF5526	0.45	+0.0
2,531,215	-		GFF5526	0.45	+0.3
2,531,215	-		GFF5526	0.45	+0.3
2,531,215	-		GFF5526	0.45	+0.3
2,531,340	+		GFF5526	0.54	+0.6
2,531,444	+		GFF5526	0.62	+0.2
2,531,445	-		GFF5526	0.62	+0.3
2,531,613	+		GFF5526	0.75	+1.0
2,531,614	-		GFF5526	0.76	+0.9
2,532,088	+		GFF5527	0.14	+0.3
2,532,353	-		GFF5527	0.34	-1.3
2,532,454	+		GFF5527	0.41	-0.4
2,532,455	-		GFF5527	0.41	-0.5
2,532,997	+		GFF5527	0.82	-0.4
2,532,997	+		GFF5527	0.82	-0.3
2,532,997	+		GFF5527	0.82	+0.3
2,532,998	-		GFF5527	0.82	-0.2
2,533,367	-		GFF5528	0.14	+0.5
2,533,805	-		GFF5528	0.71	+0.2
2,533,807	+		GFF5528	0.71	+0.4
2,534,081	+				-1.2
2,534,081	+				-0.0
2,534,082	-				-0.5