Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5397

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,400,922	-		GFF5396	0.28	+0.1
2,401,143	+		GFF5396	0.53	+0.8
2,401,144	-		GFF5396	0.54	+0.4
2,401,186	-		GFF5396	0.58	-0.0
2,401,644	-		GFF5397	0.17	-0.2
2,401,688	+		GFF5397	0.26	-0.3
2,401,689	-		GFF5397	0.27	-1.4
2,402,304	+				+0.4
2,402,330	+				+1.1
2,402,567	+				-1.4
2,402,567	+				-1.0
2,402,687	+		GFF5398	0.12	+0.3
2,402,901	-		GFF5398	0.22	+0.1
2,402,901	-		GFF5398	0.22	-0.7
2,403,002	+		GFF5398	0.27	-0.1