Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2294

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,179,586	+		GFF2293	0.59	+0.7
1,179,587	-		GFF2293	0.59	+0.1
1,179,757	+		GFF2293	0.83	-0.5
1,179,998	+		GFF2294	0.14	+0.1
1,180,166	+		GFF2294	0.36	-0.7
1,180,166	+		GFF2294	0.36	-0.1
1,180,499	+		GFF2294	0.79	-0.3
1,180,556	+		GFF2294	0.86	+0.5
1,180,557	-		GFF2294	0.87	-0.1
1,180,557	-		GFF2294	0.87	-0.8
1,181,580	+				+0.1
1,181,581	-				-0.3
1,181,624	+				-0.2
1,181,624	+				+0.0