Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF145

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
159,997	+				+0.6
159,998	-				-0.3
160,173	-				+0.1
160,959	+				-2.4
160,959	+				-1.4
160,960	-				+0.0
161,616	+		GFF145	0.35	+0.1
161,617	-		GFF145	0.35	+0.1
161,823	+		GFF145	0.45	-0.3
161,823	+		GFF145	0.45	-1.2
162,952	-				+0.2
162,952	-				-0.2
162,954	+				+1.5
162,955	-				+0.7
162,955	-				-0.4
163,436	+		GFF146	0.56	+1.2
163,436	+		GFF146	0.56	-0.5
163,436	+		GFF146	0.56	+1.8
163,764	+				+1.1
163,764	+				+0.4
163,765	-				+0.2