Strain Fitness in Escherichia fergusonii Becca around EFB2_04127

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
4,333,577	+		EFB2_04125	0.12	+1.0
4,333,577	+		EFB2_04125	0.12	-2.6
4,333,577	+		EFB2_04125	0.12	-2.6
4,333,578	-		EFB2_04125	0.13	-0.9
4,333,616	+		EFB2_04125	0.20	+1.0
4,333,616	+		EFB2_04125	0.20	+0.1
4,333,616	+		EFB2_04125	0.20	+0.7
4,333,617	-		EFB2_04125	0.20	+0.2
4,333,617	-		EFB2_04125	0.20	-0.8
4,333,657	+		EFB2_04125	0.28	-0.1
4,333,658	-		EFB2_04125	0.29	-0.3
4,333,685	+		EFB2_04125	0.34	+1.4
4,333,685	+		EFB2_04125	0.34	+1.0
4,333,685	+		EFB2_04125	0.34	+0.2
4,333,685	+		EFB2_04125	0.34	+0.4
4,333,685	+		EFB2_04125	0.34	+0.2
4,333,686	-		EFB2_04125	0.34	+0.4
4,333,686	-		EFB2_04125	0.34	+1.4
4,333,686	-		EFB2_04125	0.34	-0.3
4,333,691	+		EFB2_04125	0.35	-0.8
4,333,691	+		EFB2_04125	0.35	-0.6
4,333,691	+		EFB2_04125	0.35	+0.3
4,333,692	-		EFB2_04125	0.35	-0.2
4,333,692	-		EFB2_04125	0.35	+0.9
4,333,692	-		EFB2_04125	0.35	-0.0
4,333,692	-		EFB2_04125	0.35	+0.2
4,333,692	-		EFB2_04125	0.35	+0.5
4,333,723	+		EFB2_04125	0.41	-0.2
4,333,723	+		EFB2_04125	0.41	-0.3
4,333,723	+		EFB2_04125	0.41	+1.9
4,333,723	+		EFB2_04125	0.41	-0.9
4,333,723	+		EFB2_04125	0.41	-0.9
4,333,724	-		EFB2_04125	0.42	-0.2
4,333,724	-		EFB2_04125	0.42	-0.5
4,333,725	+		EFB2_04125	0.42	+0.2
4,333,725	+		EFB2_04125	0.42	+1.7
4,333,725	+		EFB2_04125	0.42	-0.2
4,333,725	+		EFB2_04125	0.42	-0.4
4,333,725	+		EFB2_04125	0.42	-0.5
4,333,726	-		EFB2_04125	0.42	+0.6
4,333,726	-		EFB2_04125	0.42	-1.4
4,333,726	-		EFB2_04125	0.42	-1.8
4,333,726	-		EFB2_04125	0.42	-1.3
4,333,726	-		EFB2_04125	0.42	-1.3
4,333,729	-		EFB2_04125	0.43	+0.9
4,333,736	-		EFB2_04125	0.44	-1.1
4,333,736	-		EFB2_04125	0.44	-0.0
4,333,792	+		EFB2_04125	0.55	-2.5
4,333,792	+		EFB2_04125	0.55	-0.5
4,333,792	+		EFB2_04125	0.55	-2.9
4,333,792	+		EFB2_04125	0.55	+1.5
4,333,792	+		EFB2_04125	0.55	-0.0
4,333,792	+		EFB2_04125	0.55	-1.3
4,333,792	+		EFB2_04125	0.55	+0.5
4,333,792	+		EFB2_04125	0.55	+0.1
4,333,792	+		EFB2_04125	0.55	-2.3
4,333,792	+		EFB2_04125	0.55	-0.3
4,333,793	-		EFB2_04125	0.55	+0.5
4,333,793	-		EFB2_04125	0.55	-0.9
4,333,793	-		EFB2_04125	0.55	-1.9
4,333,793	-		EFB2_04125	0.55	-0.6
4,333,793	-		EFB2_04125	0.55	-1.2
4,333,793	-		EFB2_04125	0.55	+4.3
4,333,793	-		EFB2_04125	0.55	+0.7
4,333,843	+		EFB2_04125	0.65	+0.3
4,333,843	+		EFB2_04125	0.65	-3.2
4,333,843	+		EFB2_04125	0.65	+0.6
4,333,843	+		EFB2_04125	0.65	-0.1
4,333,843	+		EFB2_04125	0.65	-0.7
4,333,843	+		EFB2_04125	0.65	-1.5
4,333,843	+		EFB2_04125	0.65	+1.3
4,333,843	+		EFB2_04125	0.65	-1.5
4,333,843	+		EFB2_04125	0.65	+0.9
4,333,843	+		EFB2_04125	0.65	-0.4
4,333,843	+		EFB2_04125	0.65	-1.4
4,333,843	+		EFB2_04125	0.65	-2.8
4,333,843	+		EFB2_04125	0.65	+0.4
4,333,843	+		EFB2_04125	0.65	-1.8
4,333,843	+		EFB2_04125	0.65	-1.1
4,333,843	+		EFB2_04125	0.65	+2.3
4,333,843	+		EFB2_04125	0.65	+0.6
4,333,843	+		EFB2_04125	0.65	-1.9
4,333,843	+		EFB2_04125	0.65	+0.6
4,333,844	-		EFB2_04125	0.65	+0.3
4,333,844	-		EFB2_04125	0.65	-1.4
4,333,844	-		EFB2_04125	0.65	+2.4
4,333,844	-		EFB2_04125	0.65	-1.9
4,333,844	-		EFB2_04125	0.65	+0.9
4,333,844	-		EFB2_04125	0.65	-0.3
4,333,844	-		EFB2_04125	0.65	+0.2
4,333,844	-		EFB2_04125	0.65	+0.6
4,333,844	-		EFB2_04125	0.65	-0.9
4,333,844	-		EFB2_04125	0.65	+1.0
4,333,844	-		EFB2_04125	0.65	+2.1
4,333,857	+		EFB2_04125	0.68	-0.0
4,333,858	-		EFB2_04125	0.68	-0.4
4,333,858	-		EFB2_04125	0.68	+0.6
4,333,874	+		EFB2_04125	0.71	-0.3
4,333,874	+		EFB2_04125	0.71	-2.3
4,333,874	+		EFB2_04125	0.71	+0.3
4,333,874	+		EFB2_04125	0.71	-0.9
4,333,874	+		EFB2_04125	0.71	+1.2
4,333,875	-		EFB2_04125	0.72	+0.4
4,333,875	-		EFB2_04125	0.72	-0.9
4,333,875	-		EFB2_04125	0.72	+1.4
4,333,875	-		EFB2_04125	0.72	-1.1
4,333,875	-		EFB2_04125	0.72	-0.7
4,333,875	-		EFB2_04125	0.72	-0.0
4,333,956	-		EFB2_04125	0.88	+0.5
4,333,956	-		EFB2_04125	0.88	+0.6
4,333,991	+				+0.5
4,333,991	+				-0.6
4,333,991	+				-3.7
4,333,992	-				+0.4
4,333,992	-				+0.3
4,333,992	-				-0.0
4,333,992	-				-0.2
4,333,992	-				+0.4
4,333,996	-				+0.9
4,334,031	+				-2.6
4,334,031	+				-0.8
4,334,032	-				+0.2
4,334,032	-				-1.0
4,334,032	-				-0.8
4,334,037	+				-1.6
4,334,037	+				-0.7
4,334,037	+				-0.0
4,334,038	-				+0.4
4,334,038	-				-2.3
4,334,038	-				+1.1
4,334,053	+				-3.1
4,334,065	+				-0.3
4,334,065	+				-1.2
4,334,065	+				+0.8
4,334,065	+				+1.2
4,334,065	+				-1.0
4,334,066	-				+0.4
4,334,066	-				-1.6
4,334,068	+				-1.9
4,334,068	+				+2.1
4,334,068	+				-1.9
4,334,068	+				+1.1
4,334,068	+				+0.0
4,334,068	+				-0.0
4,334,068	+				+1.6
4,334,068	+				+1.5
4,334,069	-				+1.6
4,334,069	-				-2.2
4,334,069	-				-0.0
4,334,069	-				-2.6
4,334,069	-				+0.3
4,334,113	-		EFB2_04126	0.16	-1.4
4,334,125	+		EFB2_04126	0.18	+0.8
4,334,125	+		EFB2_04126	0.18	+0.6
4,334,125	+		EFB2_04126	0.18	+0.3
4,334,125	+		EFB2_04126	0.18	+1.1
4,334,125	+		EFB2_04126	0.18	-0.0
4,334,125	+		EFB2_04126	0.18	+0.9
4,334,125	+		EFB2_04126	0.18	+1.5
4,334,125	+		EFB2_04126	0.18	-0.1
4,334,125	+		EFB2_04126	0.18	-1.9
4,334,125	+		EFB2_04126	0.18	-0.8
4,334,125	+		EFB2_04126	0.18	-1.0
4,334,125	+		EFB2_04126	0.18	-1.2
4,334,125	+		EFB2_04126	0.18	+1.7
4,334,125	+		EFB2_04126	0.18	+0.6
4,334,126	-		EFB2_04126	0.18	+0.6
4,334,126	-		EFB2_04126	0.18	-1.2
4,334,126	-		EFB2_04126	0.18	+0.5
4,334,126	-		EFB2_04126	0.18	+0.4
4,334,126	-		EFB2_04126	0.18	-0.9
4,334,126	-		EFB2_04126	0.18	-1.2
4,334,126	-		EFB2_04126	0.18	+2.0
4,334,126	-		EFB2_04126	0.18	-0.8
4,334,126	-		EFB2_04126	0.18	+0.6
4,334,126	-		EFB2_04126	0.18	+1.4
4,334,126	-		EFB2_04126	0.18	-1.9
4,334,126	-		EFB2_04126	0.18	+1.5
4,334,126	-		EFB2_04126	0.18	+1.1
4,334,126	-		EFB2_04126	0.18	-0.6
4,334,126	-		EFB2_04126	0.18	-0.7
4,334,180	-		EFB2_04126	0.28	-0.9
4,334,186	+		EFB2_04126	0.29	-0.2
4,334,187	-		EFB2_04126	0.30	-0.4
4,334,216	+		EFB2_04126	0.35	-1.1
4,334,216	+		EFB2_04126	0.35	+1.1
4,334,216	+		EFB2_04126	0.35	+1.1
4,334,216	+		EFB2_04126	0.35	+1.0
4,334,217	-		EFB2_04126	0.35	-0.3
4,334,217	-		EFB2_04126	0.35	+0.3
4,334,217	-		EFB2_04126	0.35	-0.2
4,334,217	-		EFB2_04126	0.35	+1.3
4,334,217	-		EFB2_04126	0.35	-0.4
4,334,245	+		EFB2_04126	0.40	-2.5
4,334,245	+		EFB2_04126	0.40	+0.6
4,334,246	-		EFB2_04126	0.41	+0.8
4,334,246	-		EFB2_04126	0.41	+0.6
4,334,246	-		EFB2_04126	0.41	+0.1
4,334,294	-		EFB2_04126	0.50	-1.3
4,334,306	+		EFB2_04126	0.52	+1.2
4,334,383	+		EFB2_04126	0.66	-0.9
4,334,383	+		EFB2_04126	0.66	-1.8
4,334,383	+		EFB2_04126	0.66	-1.5
4,334,384	-		EFB2_04126	0.67	-2.2
4,334,384	-		EFB2_04126	0.67	-0.3
4,334,420	-		EFB2_04126	0.73	+0.4
4,334,420	-		EFB2_04126	0.73	+1.1
4,334,446	+		EFB2_04126	0.78	+0.9
4,334,446	+		EFB2_04126	0.78	-3.3
4,334,446	+		EFB2_04126	0.78	+0.6
4,334,446	+		EFB2_04126	0.78	-0.9
4,334,446	+		EFB2_04126	0.78	-0.6
4,334,446	+		EFB2_04126	0.78	+0.5
4,334,446	+		EFB2_04126	0.78	-0.8
4,334,447	-		EFB2_04126	0.79	+2.6
4,334,447	-		EFB2_04126	0.79	-0.0
4,334,447	-		EFB2_04126	0.79	+0.8
4,334,447	-		EFB2_04126	0.79	+1.0
4,334,447	-		EFB2_04126	0.79	-0.5
4,334,447	-		EFB2_04126	0.79	-0.4
4,334,447	-		EFB2_04126	0.79	-0.0
4,334,447	-		EFB2_04126	0.79	+0.5
4,334,455	+		EFB2_04126	0.80	+0.7
4,334,455	+		EFB2_04126	0.80	+1.4
4,334,455	+		EFB2_04126	0.80	+0.4
4,334,455	+		EFB2_04126	0.80	-2.8
4,334,455	+		EFB2_04126	0.80	-0.3
4,334,455	+		EFB2_04126	0.80	-0.1
4,334,456	-		EFB2_04126	0.80	+1.0
4,334,456	-		EFB2_04126	0.80	+0.4
4,334,456	-		EFB2_04126	0.80	-0.8
4,334,456	-		EFB2_04126	0.80	-1.7
4,334,456	-		EFB2_04126	0.80	+0.5
4,334,456	-		EFB2_04126	0.80	+0.1
4,334,466	+		EFB2_04126	0.82	+1.0
4,334,466	+		EFB2_04126	0.82	+0.5
4,334,466	+		EFB2_04126	0.82	-1.1
4,334,466	+		EFB2_04126	0.82	+1.2
4,334,467	-		EFB2_04126	0.82	-0.4
4,334,479	+		EFB2_04126	0.85	+0.4
4,334,479	+		EFB2_04126	0.85	-1.4
4,334,479	+		EFB2_04126	0.85	-1.3
4,334,480	-		EFB2_04126	0.85	+0.2
4,334,480	-		EFB2_04126	0.85	-0.5
4,334,480	-		EFB2_04126	0.85	-2.2
4,334,480	-		EFB2_04126	0.85	-0.3
4,334,480	-		EFB2_04126	0.85	+0.5
4,334,510	+				-0.6
4,334,510	+				-1.0
4,334,510	+				+0.6
4,334,510	+				-0.7
4,334,510	+				+0.1
4,334,510	+				-1.3
4,334,511	-				+0.0
4,334,541	+				+1.1
4,334,541	+				-2.0
4,334,541	+				+0.9
4,334,542	-				-0.8
4,334,542	-				+0.7
4,334,542	-				-1.8
4,334,588	+				+0.9
4,334,588	+				-0.0
4,334,588	+				+0.1
4,334,588	+				-0.7
4,334,588	+				-1.2
4,334,589	-				-0.1
4,334,589	-				+0.3
4,334,589	-				+0.5
4,334,589	-				-0.3
4,334,589	-				-0.6
4,334,589	-				-2.0
4,334,589	-				+1.3
4,334,589	-				-2.9
4,334,597	+				+0.6
4,334,598	-				-0.1
4,334,600	+				+0.1
4,334,600	+				+0.7
4,334,600	+				+0.6
4,334,600	+				+0.4
4,334,600	+				-1.6
4,334,600	+				+0.1
4,334,600	+				-0.0
4,334,600	+				-0.4
4,334,600	+				-0.2
4,334,600	+				-1.5
4,334,600	+				+0.3
4,334,600	+				-2.5
4,334,600	+				+0.9
4,334,601	-				-1.3
4,334,601	-				+0.8
4,334,601	-				-0.7
4,334,601	-				-0.0
4,334,601	-				-0.7
4,334,601	-				+0.3
4,334,601	-				-0.4
4,334,601	-				-1.7
4,334,601	-				-1.0
4,334,601	-				+2.6
4,334,631	+				-0.9
4,334,631	+				+0.5
4,334,631	+				+0.1
4,334,632	-				-2.2
4,334,632	-				-1.4
4,334,709	+				-1.2
4,334,709	+				+2.3
4,334,710	-				-1.5
4,334,710	-				+0.6
4,334,710	-				-0.7
4,334,710	-				-1.5
4,334,710	-				+2.7
4,334,788	+				+1.1
4,334,788	+				-0.3
4,334,788	+				-1.6
4,334,788	+				+0.3
4,334,788	+				-0.4
4,334,789	-				-2.2
4,334,789	-				+0.9
4,334,789	-				+0.9
4,334,791	+				+0.0
4,334,791	+				-0.4
4,334,791	+				+0.4
4,334,792	-				-0.5
4,334,792	-				-2.3
4,334,792	-				-1.4
4,334,792	-				+0.4
4,334,792	-				-0.7
4,334,792	-				+0.3
4,334,792	-				-0.0
4,334,792	-				+0.3
4,334,792	-				+1.2
4,334,792	-				+0.1
4,334,792	-				+1.3
4,334,819	+				+0.1
4,334,836	+		EFB2_04127	0.10	+2.1
4,334,837	-		EFB2_04127	0.10	+0.9
4,334,837	-		EFB2_04127	0.10	+0.1
4,334,837	-		EFB2_04127	0.10	-0.7
4,334,890	+		EFB2_04127	0.12	+0.7
4,334,891	-		EFB2_04127	0.12	+0.4
4,334,891	-		EFB2_04127	0.12	+0.7
4,334,894	+		EFB2_04127	0.12	+1.2
4,334,894	+		EFB2_04127	0.12	+0.7
4,334,894	+		EFB2_04127	0.12	+0.6
4,334,894	+		EFB2_04127	0.12	+0.3
4,334,905	+		EFB2_04127	0.13	+1.5
4,334,906	-		EFB2_04127	0.13	+0.1
4,334,917	+		EFB2_04127	0.13	+0.6
4,334,917	+		EFB2_04127	0.13	-0.7
4,334,918	-		EFB2_04127	0.13	+0.5
4,334,918	-		EFB2_04127	0.13	-0.4
4,334,918	-		EFB2_04127	0.13	-1.5
4,334,923	+		EFB2_04127	0.13	-0.2
4,334,961	+		EFB2_04127	0.15	-0.1
4,334,962	-		EFB2_04127	0.15	+0.3
4,335,043	+		EFB2_04127	0.18	-1.2
4,335,044	-		EFB2_04127	0.18	-1.0
4,335,059	-		EFB2_04127	0.19	-0.4
4,335,104	+		EFB2_04127	0.20	+0.2
4,335,126	+		EFB2_04127	0.21	-0.4
4,335,126	+		EFB2_04127	0.21	+0.3
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