Strain Fitness in Escherichia fergusonii Becca around EFB2_03136

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
3,278,380	+		EFB2_03135	0.30	-2.0
3,278,380	+		EFB2_03135	0.30	-2.4
3,278,380	+		EFB2_03135	0.30	+1.6
3,278,380	+		EFB2_03135	0.30	+0.7
3,278,380	+		EFB2_03135	0.30	+0.5
3,278,381	-		EFB2_03135	0.30	+1.7
3,278,381	-		EFB2_03135	0.30	-0.2
3,278,381	-		EFB2_03135	0.30	-1.0
3,278,381	-		EFB2_03135	0.30	-0.2
3,278,384	+		EFB2_03135	0.31	+0.8
3,278,385	-		EFB2_03135	0.31	-0.4
3,278,385	-		EFB2_03135	0.31	+1.6
3,278,385	-		EFB2_03135	0.31	+0.1
3,278,408	+		EFB2_03135	0.33	-1.8
3,278,416	+		EFB2_03135	0.34	-0.3
3,278,417	-		EFB2_03135	0.34	+0.5
3,278,417	-		EFB2_03135	0.34	+0.7
3,278,420	+		EFB2_03135	0.34	+0.8
3,278,420	+		EFB2_03135	0.34	-0.4
3,278,420	+		EFB2_03135	0.34	+0.1
3,278,420	+		EFB2_03135	0.34	-2.1
3,278,420	+		EFB2_03135	0.34	-0.1
3,278,420	+		EFB2_03135	0.34	+0.4
3,278,420	+		EFB2_03135	0.34	+1.2
3,278,420	+		EFB2_03135	0.34	+0.6
3,278,420	+		EFB2_03135	0.34	-1.3
3,278,420	+		EFB2_03135	0.34	-1.9
3,278,420	+		EFB2_03135	0.34	-1.0
3,278,420	+		EFB2_03135	0.34	+0.4
3,278,420	+		EFB2_03135	0.34	-0.0
3,278,420	+		EFB2_03135	0.34	-0.8
3,278,420	+		EFB2_03135	0.34	+0.3
3,278,420	+		EFB2_03135	0.34	-1.7
3,278,420	+		EFB2_03135	0.34	-0.8
3,278,421	-		EFB2_03135	0.34	+0.0
3,278,421	-		EFB2_03135	0.34	-0.6
3,278,421	-		EFB2_03135	0.34	+1.4
3,278,421	-		EFB2_03135	0.34	-1.1
3,278,421	-		EFB2_03135	0.34	-1.4
3,278,421	-		EFB2_03135	0.34	-0.6
3,278,421	-		EFB2_03135	0.34	-0.6
3,278,421	-		EFB2_03135	0.34	+0.7
3,278,421	-		EFB2_03135	0.34	-2.8
3,278,421	-		EFB2_03135	0.34	-0.4
3,278,421	-		EFB2_03135	0.34	-1.4
3,278,421	-		EFB2_03135	0.34	+0.1
3,278,432	+		EFB2_03135	0.35	+2.2
3,278,432	+		EFB2_03135	0.35	-0.8
3,278,432	+		EFB2_03135	0.35	-0.9
3,278,433	-		EFB2_03135	0.35	+1.3
3,278,433	-		EFB2_03135	0.35	-3.8
3,278,447	+		EFB2_03135	0.36	-1.1
3,278,455	+		EFB2_03135	0.37	-0.8
3,278,456	-		EFB2_03135	0.37	-1.4
3,278,486	+		EFB2_03135	0.40	-0.4
3,278,486	+		EFB2_03135	0.40	+0.1
3,278,486	+		EFB2_03135	0.40	+1.7
3,278,486	+		EFB2_03135	0.40	+0.7
3,278,486	+		EFB2_03135	0.40	+0.1
3,278,486	+		EFB2_03135	0.40	+0.4
3,278,486	+		EFB2_03135	0.40	-0.7
3,278,487	-		EFB2_03135	0.40	+2.6
3,278,487	-		EFB2_03135	0.40	+0.1
3,278,487	-		EFB2_03135	0.40	+2.2
3,278,487	-		EFB2_03135	0.40	-0.4
3,278,487	-		EFB2_03135	0.40	+0.6
3,278,487	-		EFB2_03135	0.40	-0.1
3,278,527	+		EFB2_03135	0.44	+0.6
3,278,527	+		EFB2_03135	0.44	-0.7
3,278,527	+		EFB2_03135	0.44	+0.1
3,278,527	+		EFB2_03135	0.44	-0.9
3,278,527	+		EFB2_03135	0.44	+0.7
3,278,527	+		EFB2_03135	0.44	-2.6
3,278,527	+		EFB2_03135	0.44	-0.5
3,278,527	+		EFB2_03135	0.44	+0.2
3,278,527	+		EFB2_03135	0.44	-1.1
3,278,527	+		EFB2_03135	0.44	-0.3
3,278,527	+		EFB2_03135	0.44	-0.5
3,278,528	-		EFB2_03135	0.44	-0.2
3,278,528	-		EFB2_03135	0.44	-1.5
3,278,528	-		EFB2_03135	0.44	-0.8
3,278,528	-		EFB2_03135	0.44	-1.5
3,278,528	-		EFB2_03135	0.44	-0.1
3,278,528	-		EFB2_03135	0.44	+0.2
3,278,531	+		EFB2_03135	0.44	-1.3
3,278,532	-		EFB2_03135	0.44	+0.2
3,278,532	-		EFB2_03135	0.44	+0.5
3,278,532	-		EFB2_03135	0.44	-0.4
3,278,532	-		EFB2_03135	0.44	+0.8
3,278,536	+		EFB2_03135	0.45	+1.7
3,278,536	+		EFB2_03135	0.45	+2.3
3,278,536	+		EFB2_03135	0.45	+2.2
3,278,536	+		EFB2_03135	0.45	+0.4
3,278,536	+		EFB2_03135	0.45	+0.6
3,278,536	+		EFB2_03135	0.45	-2.2
3,278,537	-		EFB2_03135	0.45	+0.4
3,278,537	-		EFB2_03135	0.45	-2.3
3,278,537	-		EFB2_03135	0.45	-1.0
3,278,585	+		EFB2_03135	0.49	+0.8
3,278,585	+		EFB2_03135	0.49	-1.9
3,278,585	+		EFB2_03135	0.49	+0.9
3,278,647	+		EFB2_03135	0.55	-1.8
3,278,647	+		EFB2_03135	0.55	+1.9
3,278,648	-		EFB2_03135	0.55	+1.3
3,278,648	-		EFB2_03135	0.55	+1.6
3,278,648	-		EFB2_03135	0.55	-1.3
3,278,648	-		EFB2_03135	0.55	-1.8
3,278,648	-		EFB2_03135	0.55	-0.4
3,278,654	+		EFB2_03135	0.55	-0.4
3,278,655	-		EFB2_03135	0.55	+2.7
3,278,655	-		EFB2_03135	0.55	-1.4
3,278,660	+		EFB2_03135	0.56	+0.8
3,278,660	+		EFB2_03135	0.56	+0.7
3,278,660	+		EFB2_03135	0.56	-2.5
3,278,687	+		EFB2_03135	0.58	+0.7
3,278,687	+		EFB2_03135	0.58	-0.1
3,278,687	+		EFB2_03135	0.58	-1.2
3,278,687	+		EFB2_03135	0.58	-0.5
3,278,687	+		EFB2_03135	0.58	-1.6
3,278,687	+		EFB2_03135	0.58	-0.4
3,278,687	+		EFB2_03135	0.58	-0.0
3,278,688	-		EFB2_03135	0.58	-0.4
3,278,688	-		EFB2_03135	0.58	-1.5
3,278,688	-		EFB2_03135	0.58	-0.2
3,278,688	-		EFB2_03135	0.58	-1.5
3,278,774	+		EFB2_03135	0.66	+0.7
3,278,775	-		EFB2_03135	0.66	-0.7
3,278,775	-		EFB2_03135	0.66	+0.9
3,278,775	-		EFB2_03135	0.66	+0.3
3,278,792	+		EFB2_03135	0.68	-1.4
3,278,792	+		EFB2_03135	0.68	-1.0
3,278,792	+		EFB2_03135	0.68	-0.1
3,278,792	+		EFB2_03135	0.68	+1.4
3,278,792	+		EFB2_03135	0.68	-0.8
3,278,792	+		EFB2_03135	0.68	+0.7
3,278,792	+		EFB2_03135	0.68	+1.5
3,278,792	+		EFB2_03135	0.68	-1.3
3,278,792	+		EFB2_03135	0.68	-2.1
3,278,793	-		EFB2_03135	0.68	-0.8
3,278,793	-		EFB2_03135	0.68	+3.2
3,278,793	-		EFB2_03135	0.68	+1.2
3,278,793	-		EFB2_03135	0.68	+1.1
3,278,793	-		EFB2_03135	0.68	+2.7
3,278,807	+		EFB2_03135	0.69	-1.4
3,278,827	+		EFB2_03135	0.71	-2.2
3,278,840	-		EFB2_03135	0.72	+1.1
3,278,842	+		EFB2_03135	0.73	+0.1
3,278,842	+		EFB2_03135	0.73	+0.2
3,278,892	+		EFB2_03135	0.77	+0.7
3,278,892	+		EFB2_03135	0.77	+0.4
3,278,893	-		EFB2_03135	0.77	-1.5
3,278,893	-		EFB2_03135	0.77	+0.3
3,278,904	-		EFB2_03135	0.78	-1.2
3,278,939	+		EFB2_03135	0.82	+2.1
3,278,939	+		EFB2_03135	0.82	-0.3
3,278,950	+		EFB2_03135	0.83	-0.4
3,278,950	+		EFB2_03135	0.83	-0.5
3,278,964	+		EFB2_03135	0.84	-0.9
3,278,964	+		EFB2_03135	0.84	-2.5
3,278,964	+		EFB2_03135	0.84	+1.5
3,278,964	+		EFB2_03135	0.84	-0.5
3,278,964	+		EFB2_03135	0.84	+1.1
3,278,964	+		EFB2_03135	0.84	-0.9
3,278,965	-		EFB2_03135	0.84	+1.3
3,278,996	+		EFB2_03135	0.87	+0.1
3,278,996	+		EFB2_03135	0.87	-0.6
3,278,996	+		EFB2_03135	0.87	+0.6
3,278,996	+		EFB2_03135	0.87	+0.4
3,278,996	+		EFB2_03135	0.87	+0.7
3,278,996	+		EFB2_03135	0.87	-0.0
3,278,996	+		EFB2_03135	0.87	+1.2
3,278,996	+		EFB2_03135	0.87	-0.6
3,278,997	-		EFB2_03135	0.87	+0.2
3,279,018	-		EFB2_03135	0.89	-2.0
3,279,018	-		EFB2_03135	0.89	-0.7
3,279,018	-		EFB2_03135	0.89	-1.2
3,279,020	+		EFB2_03135	0.89	+1.6
3,279,020	+		EFB2_03135	0.89	+2.5
3,279,020	+		EFB2_03135	0.89	+1.8
3,279,020	+		EFB2_03135	0.89	+0.4
3,279,020	+		EFB2_03135	0.89	-0.4
3,279,020	+		EFB2_03135	0.89	+0.2
3,279,020	+		EFB2_03135	0.89	-0.2
3,279,020	+		EFB2_03135	0.89	+0.3
3,279,021	-		EFB2_03135	0.89	+1.4
3,279,021	-		EFB2_03135	0.89	-3.6
3,279,021	-		EFB2_03135	0.89	-2.2
3,279,021	-		EFB2_03135	0.89	-1.4
3,279,044	+				-0.3
3,279,044	+				+0.5
3,279,044	+				-0.2
3,279,044	+				-2.6
3,279,044	+				-0.2
3,279,044	+				-2.4
3,279,044	+				-0.1
3,279,044	+				+0.8
3,279,044	+				-0.8
3,279,044	+				-1.0
3,279,044	+				+2.0
3,279,044	+				-2.6
3,279,044	+				+1.2
3,279,044	+				-1.5
3,279,044	+				-0.5
3,279,044	+				-1.8
3,279,044	+				+0.6
3,279,044	+				+0.3
3,279,044	+				-0.6
3,279,044	+				-0.6
3,279,044	+				+1.3
3,279,044	+				+0.0
3,279,044	+				+1.0
3,279,044	+				+0.3
3,279,044	+				-0.9
3,279,044	+				-1.0
3,279,044	+				+1.2
3,279,044	+				-1.6
3,279,044	+				+1.2
3,279,044	+				-0.5
3,279,044	+				-0.4
3,279,044	+				+0.7
3,279,044	+				-1.1
3,279,045	-				-0.5
3,279,045	-				-0.5
3,279,045	-				-1.0
3,279,045	-				+1.1
3,279,045	-				-0.1
3,279,045	-				-2.3
3,279,045	-				+1.5
3,279,045	-				-0.3
3,279,045	-				+1.6
3,279,045	-				+0.8
3,279,045	-				+0.6
3,279,045	-				-0.6
3,279,045	-				-1.6
3,279,045	-				+1.2
3,279,045	-				-0.6
3,279,045	-				+1.5
3,279,045	-				-0.2
3,279,045	-				+1.6
3,279,045	-				-0.2
3,279,045	-				-0.2
3,279,045	-				-0.2
3,279,045	-				+0.2
3,279,045	-				-0.6
3,279,053	+				+0.2
3,279,053	+				+1.2
3,279,053	+				+0.6
3,279,053	+				-3.6
3,279,053	+				-0.6
3,279,053	+				-1.5
3,279,053	+				+0.7
3,279,053	+				-1.9
3,279,053	+				-1.4
3,279,053	+				-0.2
3,279,053	+				-0.2
3,279,053	+				-2.2
3,279,053	+				-2.4
3,279,053	+				-1.5
3,279,053	+				+0.3
3,279,054	+				+0.0
3,279,093	+				-1.1
3,279,093	+				-0.5
3,279,093	+				-0.5
3,279,093	+				-0.3
3,279,129	-				+1.2
3,279,137	+				+1.0
3,279,137	+				-1.1
3,279,137	+				+1.0
3,279,137	+				+0.6
3,279,137	+				-0.1
3,279,138	-				-0.6
3,279,138	-				-0.2
3,279,138	-				+1.1
3,279,140	+				+0.4
3,279,140	+				-0.2
3,279,140	+				+1.6
3,279,140	+				-1.2
3,279,156	+				-0.9
3,279,156	+				-1.4
3,279,157	-				-2.6
3,279,157	-				-1.4
3,279,194	+				-1.9
3,279,248	+				+0.7
3,279,248	+				+1.5
3,279,248	+				+0.5
3,279,249	-				-0.8
3,279,249	-				-0.4
3,279,251	+				+1.2
3,279,252	-				+1.9
3,279,252	-				-0.6
3,279,265	+				+2.4
3,279,303	+				+1.6
3,279,309	+				-1.6
3,279,309	+				-0.5
3,279,310	-				+0.6
3,279,429	+				+0.5
3,279,429	+				-0.4
3,279,429	+				+0.9
3,279,429	+				+1.7
3,279,430	-				+1.2
3,279,430	-				+0.6
3,279,430	-				+0.6
3,279,430	-				+0.2
3,279,432	-				-1.4
3,279,486	+		EFB2_03136	0.14	-0.5
3,279,581	+		EFB2_03136	0.22	-0.4
3,279,582	-		EFB2_03136	0.22	+0.6
3,279,643	+		EFB2_03136	0.27	-0.4
3,279,643	+		EFB2_03136	0.27	+1.8
3,279,644	-		EFB2_03136	0.27	+0.5
3,279,674	+		EFB2_03136	0.29	-1.2
3,279,683	+		EFB2_03136	0.30	-2.2
3,279,722	+		EFB2_03136	0.33	-0.5
3,279,722	+		EFB2_03136	0.33	-1.0
3,279,734	+		EFB2_03136	0.34	-0.2
3,279,734	+		EFB2_03136	0.34	-1.0
3,279,734	+		EFB2_03136	0.34	-1.0
3,279,762	+		EFB2_03136	0.37	-1.5
3,279,763	-		EFB2_03136	0.37	+1.8
3,279,768	+		EFB2_03136	0.37	+1.2
3,279,769	-		EFB2_03136	0.37	+1.2
3,279,771	+		EFB2_03136	0.38	-0.2
3,279,771	+		EFB2_03136	0.38	-0.5
3,279,771	+		EFB2_03136	0.38	-0.2
3,279,771	+		EFB2_03136	0.38	-2.2
3,279,771	+		EFB2_03136	0.38	+0.2
3,279,771	+		EFB2_03136	0.38	-0.1
3,279,771	+		EFB2_03136	0.38	+1.0
3,279,772	-		EFB2_03136	0.38	+1.4
3,279,772	-		EFB2_03136	0.38	-0.1
3,279,844	+		EFB2_03136	0.44	-0.5
3,279,844	+		EFB2_03136	0.44	-1.2
3,279,844	+		EFB2_03136	0.44	+2.8
3,279,844	+		EFB2_03136	0.44	-2.1
3,279,844	+		EFB2_03136	0.44	-1.2
3,279,844	+		EFB2_03136	0.44	-1.8
3,279,844	+		EFB2_03136	0.44	+0.9
3,279,844	+		EFB2_03136	0.44	+2.6
3,279,963	+		EFB2_03136	0.54	+1.6
3,280,028	+		EFB2_03136	0.59	-1.5
3,280,028	+		EFB2_03136	0.59	-0.9
3,280,028	+		EFB2_03136	0.59	-0.8
3,280,028	+		EFB2_03136	0.59	+1.2
3,280,028	+		EFB2_03136	0.59	+0.2
3,280,074	+		EFB2_03136	0.63	+0.4
3,280,074	+		EFB2_03136	0.63	-1.0
3,280,097	+		EFB2_03136	0.65	-0.7
3,280,097	+		EFB2_03136	0.65	+2.2
3,280,166	+		EFB2_03136	0.71	-0.7
3,280,167	-		EFB2_03136	0.71	+2.0
3,280,167	-		EFB2_03136	0.71	-0.8
3,280,170	+		EFB2_03136	0.71	+1.3
3,280,170	+		EFB2_03136	0.71	-0.2
3,280,170	+		EFB2_03136	0.71	-0.4
3,280,170	+		EFB2_03136	0.71	-1.8
3,280,170	+		EFB2_03136	0.71	+0.6
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